Gene CAMKL-S1_f-2 (S.moellendorffii)
CAMKL-S1_f-2
Species: S.moellendorffii
Alias: CAMKL-S1_f-2
External Links:
Annotation:
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| CAMKL-S1_f-2.AA | Protein | None | 424 | None | Fasta, JSON |
| CAMKL-S1_f-2.NA | RNA | None | 1275 | None | Fasta, JSON |
| CAMKL-S1_f-2.kin_dom | Protein Kinase Domain | None | 55 | None | Fasta, JSON |
Protein domains of CAMKL-S1_f-2.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| Kinase | CAMKL-S1_f-2.AA | Pkinase | 294-348 | 31 | 4e-12 | 43.96 | Pfam | 119-177 (293) | Show / Hide |
Range on Protein: 294-348 Range on HMM: 119-177/293 Sequence Identity: 31% (19 aa) RGLKHLHSKGVLHRDVKPDNLVVF-PGNV---LKINDYDVSCF--KGESRAYSEMVGTVGY |||...||.|..|||.||.|. . |.. .|| | .... .. .. .|| .| RGLEYCHSMGIIHRDLKPENILIDNNGHIDACVKICDFGLAKQFDY-NNS-MTTFCGTPWY |
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| Kinase | CAMKL-S1_f-2.AA | nmo | 294-327 | 61 | 2.4e-11 | 30.54 | In-house | 113-146 (292) | Show / Hide |
Range on Protein: 294-327 Range on HMM: 113-146/292 Sequence Identity: 61% (21 aa) RGLKHLHSKGVLHRDVKPDNLVVFPGNVLKINDY |||| ||| ..||||.|| ||.| |||| |. RGLKYLHSANILHRDIKPGNLLVNSNCVLKICDF |
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| Kinase | CAMKL-S1_f-2.AA | LKB | 295-329 | 48 | 2.7e-11 | 29.82 | In-house | 116-150 (265) | Show / Hide |
Range on Protein: 295-329 Range on HMM: 116-150/265 Sequence Identity: 48% (17 aa) GLKHLHSKGVLHRDVKPDNLVVFPGNVLKINDYDV |. |||..|.|.|.||.|| . .|.||| |. | GCEYLHSQRVVHKDIKPGNLLLTHDNTLKICDFGV |
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| Kinase | CAMKL-S1_f-2.AA | CDK7 | 291-327 | 43 | 4.3e-10 | 22.62 | In-house | 110-146 (288) | Show / Hide |
Range on Protein: 291-327 Range on HMM: 110-146/288 Sequence Identity: 43% (16 aa) MAYRGLKHLHSKGVLHRDVKPDNLVVFPGNVLKINDY |. .|| ..| .|||| || || . . .||| |. MTLQGLEYCHRNWILHRDLKPNNLLMNENGQLKIADF |
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| Kinase | CAMKL-S1_f-2.AA | CMGC | 294-326 | 28 | 4.3e-10 | 28.42 | In-house | 191-247 (513) | Show / Hide |
Range on Protein: 294-326 Range on HMM: 191-247/513 Sequence Identity: 28% (16 aa) RGLK--HLHSKG--VLHRDVKPDNLVVFPGNVL--------------------KIND |||| ..||.. ..||| || |. . . . | || | RGLKLKYCHSHWGNIIHRDLKPENILINHNCELITRMMWKSEDWNPCQKNGRLKICD |
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| Kinase | CAMKL-S1_f-2.AA | GSK | 294-316 | 60 | 1.6e-09 | 24.65 | In-house | 127-149 (328) | Show / Hide |
Range on Protein: 294-316 Range on HMM: 127-149/328 Sequence Identity: 60% (14 aa) RGLKHLHSKGVLHRDVKPDNLVV |||..|||.|. |||.||.|..| RGLAYLHSHGICHRDIKPQNILV |
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| Kinase | CAMKL-S1_f-2.AA | Ciliate-E2 | 295-326 | 42 | 2e-09 | 28.53 | In-house | 172-199 (365) | Show / Hide |
Range on Protein: 295-326 Range on HMM: 172-199/365 Sequence Identity: 42% (14 aa) GLKHLHSKG-VLHRDVKPDNLVVFPGNVLKIND .|..||||. ..||| ||.|... .|| | ALEYLHSKNNIIHRDIKPENILF-----IKIID |
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| Kinase | CAMKL-S1_f-2.AA | CAMK | 295-348 | 15 | 2e-09 | 25.82 | In-house | 191-285 (425) | Show / Hide |
Range on Protein: 295-348 Range on HMM: 191-285/425 Sequence Identity: 15% (15 aa) GLKHLHSKGVLHRDVKPDNLVVFPG-----------------NVLKINDYDVSCFKGESR------------------------AYSEMVGTVGY .....||... ||| ||.|. . | .|| | .... .. .....|| .| AVHYCHSHNIVHRDLKPENILLDDNNDDSDPVEHDEIFDWNNNNIKIIDFGFANKFDPGENNFMCSDYKGGEMHNQWTTPTEGQKMKTFCGTPEY |
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| Kinase | CAMKL-S1_f-2.AA | AGC | 295-315 | 47 | 2.2e-09 | 18.89 | In-house | 165-187 (395) | Show / Hide |
Range on Protein: 295-315 Range on HMM: 165-187/395 Sequence Identity: 47% (11 aa) GLKHLHS-KGVLHRD-VKPDNLV .| .||| .|. ||| .||.|.. ALEYLHSHMGIIHRDYLKPENIL |
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| Kinase | CAMKL-S1_f-2.AA | TKL | 294-348 | 19 | 6.6e-09 | 28.23 | In-house | 143-239 (364) | Show / Hide |
Range on Protein: 294-348 Range on HMM: 143-239/364 Sequence Identity: 19% (19 aa) RGLKHLHS--------KGVLHRDVKPDNLVVFPGNV--------------LKINDYDVSCFKGESR--------------------AYSEMVGTVGY ||. .||| ....||| |..|. |. . .|| |. | |. .| . . .|| .. RGMNYLHSMNPKWCTKPPIIHRDLKSKNILVDENWTNVSNYMYNPNADWCCKICDFGLSRFMSQSGNMNDTMTTMMESAEHQNNRKTTMTQCGTPRW |
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| Kinase | CAMKL-S1_f-2.AA | Trio | 295-326 | 33 | 9.5e-09 | 17.88 | In-house | 107-142 (258) | Show / Hide |
Range on Protein: 295-326 Range on HMM: 107-142/258 Sequence Identity: 33% (12 aa) GLKHLHSKGVLHRDVKPDNLVVFPGNV----LKIND .. ||. ..|| |.||.|. . ..| .|| | AVHYLHNCHILHLDIKPENMMMWHYNAGRPQIKICD |
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| S_TKc | CAMKL-S1_f-2.AA | S_TKc | 235-389 | 12 | 4.5e-05 | -102.57 | SMART | 1-231 (231) | Show / Hide |
Range on Protein: 235-389
Range on HMM: 1-231/231
Sequence Identity: 12% (32 aa)
LSDLTPV---AYGKKSLVVLRR-SAFNVLKICSPSSAEMERRIHAASDGHCNVRRLVNWGM-----------AY--------------------------
| .. |.|| ... .. .|| . ... |..|. .| |. .| .
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK-EHIRREIQILKK--HHPNIVKLYDVFQDDHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPEHAR
-------RGLKHLHSKGVLHRDVKPDNLVVFPGNVLKINDYDVSCFKGESRAYSEMVGTVGY-------HTC----------------SMQHFFLPSACT
..|...||.|..|||.||.|. . ..|| | .... . ..|| | ... . . |
FYMYQICCALEYCHSHGIIHRDLKPENILLDE--HIKICDFGLARQL------TTFCGTPWYMAPEVLGYGKCKCDWWSCGCILYEMLCGYPPFP---QM
WQVYHADGGRPSSQFS---------NTRTRW-------------RWWL
.... | |... . . |. |.
QMMFKKIG---SPEAKDFIRKCLQKDPEKRPTAEALQDEWDIKCHPWF
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