Gene CAMKL-S1_c (S.moellendorffii)
CAMKL-S1_c
Species: S.moellendorffii
Alias: CAMKL-S1_c
External Links:
Annotation:
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| CAMKL-S1_c.AA | Protein | None | 429 | None | Fasta, JSON |
| CAMKL-S1_c.NA | RNA | None | 1290 | None | Fasta, JSON |
| CAMKL-S1_c.kin_dom | Protein Kinase Domain | None | 58 | None | Fasta, JSON |
Protein domains of CAMKL-S1_c.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| Pkinase | CAMKL-S1_c.AA | Pkinase | 302-359 | 29 | 2.9e-12 | 44.43 | Pfam | 119-180 (293) | Show / Hide |
Range on Protein: 302-359 Range on HMM: 119-180/293 Sequence Identity: 29% (19 aa) CGLKHLHSKGVLHRDVKPDNLVVF-PGNV---LKINDYDVSCF--KGESRAYSEMVGTVGYQSP .||...||.|..|||.||.|. . |.. .|| | .... .. .. .|| .| .| RGLEYCHSMGIIHRDLKPENILIDNNGHIDACVKICDFGLAKQFDY-NNS-MTTFCGTPWYMAP |
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| Kinase | CAMKL-S1_c.AA | LKB | 303-337 | 48 | 2.7e-11 | 29.82 | In-house | 116-150 (265) | Show / Hide |
Range on Protein: 303-337 Range on HMM: 116-150/265 Sequence Identity: 48% (17 aa) GLKHLHSKGVLHRDVKPDNLVVFPGNVLKINDYDV |. |||..|.|.|.||.|| . .|.||| |. | GCEYLHSQRVVHKDIKPGNLLLTHDNTLKICDFGV |
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| Kinase | CAMKL-S1_c.AA | CAMK | 302-359 | 16 | 8.6e-11 | 30.27 | In-house | 190-289 (425) | Show / Hide |
Range on Protein: 302-359 Range on HMM: 190-289/425 Sequence Identity: 16% (16 aa) CGLKHLHSKGVLHRDVKPDNLVVFPG-----------------NVLKINDYDVSCFKGESR------------------------AYSEMVGTVGYQS-P ......||... ||| ||.|. . | .|| | .... .. .....|| .| . | SAVHYCHSHNIVHRDLKPENILLDDNNDDSDPVEHDEIFDWNNNNIKIIDFGFANKFDPGENNFMCSDYKGGEMHNQWTTPTEGQKMKTFCGTPEYMAAP |
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| Kinase | CAMKL-S1_c.AA | nmo | 303-335 | 60 | 3e-10 | 27.09 | In-house | 114-146 (292) | Show / Hide |
Range on Protein: 303-335 Range on HMM: 114-146/292 Sequence Identity: 60% (20 aa) GLKHLHSKGVLHRDVKPDNLVVFPGNVLKINDY ||| ||| ..||||.|| ||.| |||| |. GLKYLHSANILHRDIKPGNLLVNSNCVLKICDF |
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| Kinase | CAMKL-S1_c.AA | TKL | 302-359 | 19 | 5.1e-10 | 32.29 | In-house | 143-242 (364) | Show / Hide |
Range on Protein: 302-359 Range on HMM: 143-242/364 Sequence Identity: 19% (19 aa) CGLKHLHS--------KGVLHRDVKPDNLVVFPGNV--------------LKINDYDVSCFKGESR--------------------AYSEMVGTVGYQSP .|. .||| ....||| |..|. |. . .|| |. | |. .| . . .|| .. .| RGMNYLHSMNPKWCTKPPIIHRDLKSKNILVDENWTNVSNYMYNPNADWCCKICDFGLSRFMSQSGNMNDTMTTMMESAEHQNNRKTTMTQCGTPRWMAP |
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| Kinase | CAMKL-S1_c.AA | AGC | 302-323 | 44 | 5.3e-10 | 20.53 | In-house | 159-187 (395) | Show / Hide |
Range on Protein: 302-323 Range on HMM: 159-187/395 Sequence Identity: 44% (13 aa) CG-----LKHLHS-KGVLHRD-VKPDNLV || | .||| .|. ||| .||.|.. CGCIVLALEYLHSHMGIIHRDYLKPENIL |
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| Kinase | CAMKL-S1_c.AA | Ciliate-E2 | 302-334 | 41 | 1.2e-09 | 29.23 | In-house | 171-199 (365) | Show / Hide |
Range on Protein: 302-334 Range on HMM: 171-199/365 Sequence Identity: 41% (14 aa) CGLKHLHSKG-VLHRDVKPDNLVVFPGNVLKIND ..|..||||. ..||| ||.|... .|| | LALEYLHSKNNIIHRDIKPENILF-----IKIID |
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| Kinase | CAMKL-S1_c.AA | CMGC | 302-334 | 26 | 1.4e-09 | 26.71 | In-house | 191-247 (513) | Show / Hide |
Range on Protein: 302-334 Range on HMM: 191-247/513 Sequence Identity: 26% (15 aa) CGLK--HLHSKG--VLHRDVKPDNLVVFPGNVL--------------------KIND .||| ..||.. ..||| || |. . . . | || | RGLKLKYCHSHWGNIIHRDLKPENILINHNCELITRMMWKSEDWNPCQKNGRLKICD |
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| Kinase | CAMKL-S1_c.AA | Ciliate-E2-Unclassified | 302-359 | 23 | 1.6e-09 | 29.19 | In-house | 154-235 (352) | Show / Hide |
Range on Protein: 302-359 Range on HMM: 154-235/352 Sequence Identity: 23% (19 aa) CGLKHLHSKG-VLHRDVKPDNLVVFPGN---VLKINDYDVSCFKGE----------------SRAYSEMVGTVGYQ----SP .||..||.|. ..||| ||.|... .. .|| |. | . .. . .. ..|| .|. .| QGLEYLHHKNNIIHRDIKPENILFDNNGKNYYIKIIDFGISKKYQQNNNCDTNQQQKMQIWKQQMMWTFCGTPNYMPQYTAP |
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| Kinase | CAMKL-S1_c.AA | CAMKL | 302-332 | 39 | 5.4e-09 | 24.69 | In-house | 138-170 (297) | Show / Hide |
Range on Protein: 302-332 Range on HMM: 138-170/297 Sequence Identity: 39% (13 aa) CGLKHLHSKGVLHRDVKPDNLVVF-PGN-VLKI ......||.|. ||| ||.|. . || ..|| SAVNYCHSHGIVHRDIKPENILLDENGNNNIKI |
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| Kinase | CAMKL-S1_c.AA | GSK | 302-324 | 56 | 6.2e-09 | 22.8 | In-house | 127-149 (328) | Show / Hide |
Range on Protein: 302-324 Range on HMM: 127-149/328 Sequence Identity: 56% (13 aa) CGLKHLHSKGVLHRDVKPDNLVV .||..|||.|. |||.||.|..| RGLAYLHSHGICHRDIKPQNILV |
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| S_TKc | CAMKL-S1_c.AA | S_TKc | 243-426 | 14 | 4.9e-07 | -73.7 | SMART | 1-231 (231) | Show / Hide |
Range on Protein: 243-426
Range on HMM: 1-231/231
Sequence Identity: 14% (35 aa)
LSDLTPV---AYGKKSLVVLRR-SASNVLKICSPSSAEMERRIHGASDGHSNVRRLVNWGM-----------AY--------------------------
| .. |.|| ... .. .|| . ... |..|. .| |. .| .
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK-EHIRREIQILKK--HHPNIVKLYDVFQDDHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPEHAR
-------CGLKHLHSKGVLHRDVKPDNLVVFPGNVLKINDYDVSCFKGESRAYSEMVGTVGYQSPSDMLPYVE-EDDVLSLALSFYALKFGTTTTSKAGR
|.|...||.|..|||.||.|. . ..|| | .... . ..|| | .| . .| . |. |. .| . | . .
FYMYQICCALEYCHSHGIIHRDLKPENILLDE--HIKICDFGLARQL------TTFCGTPWYMAPEVL-GYGKCKCDWWSCGCILYEMLCGYPPFP---Q
LHILLRELQPDVFPETMIQAVKEAVTQ----------LD-------LELL
.. ... . .. ... .. . | . .
MQMMFKKIG----SPEAKDFIRKCLQKDPEKRPTAEALQDEWDIKCHPWF
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