Gene CAMKL-S1_b (S.moellendorffii)
CAMKL-S1_b
Species: S.moellendorffii
Alias: CAMKL-S1_b
External Links:
Annotation:
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| CAMKL-S1_b.AA | Protein | None | 364 | None | Fasta, JSON |
| CAMKL-S1_b.NA | RNA | None | 1095 | None | Fasta, JSON |
| CAMKL-S1_b.kin_dom | Protein Kinase Domain | None | 61 | None | Fasta, JSON |
Protein domains of CAMKL-S1_b.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| Kinase | CAMKL-S1_b.AA | Trio | 258-290 | 40 | 2.6e-12 | 27.19 | In-house | 106-142 (258) | Show / Hide |
Range on Protein: 258-290 Range on HMM: 106-142/258 Sequence Identity: 40% (15 aa) EGLRHLHGKGILHRDVKPDNMLVFKGNV----LKIND |... ||. .||| |.||.||.. ..| .|| | EAVHYLHNCHILHLDIKPENMMMWHYNAGRPQIKICD |
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| Kinase | CAMKL-S1_b.AA | GSK | 255-280 | 61 | 1.2e-11 | 31.28 | In-house | 124-149 (328) | Show / Hide |
Range on Protein: 255-280 Range on HMM: 124-149/328 Sequence Identity: 61% (16 aa) QAFEGLRHLHGKGILHRDVKPDNMLV | | ||..||..|| |||.||.|.|| QMFRGLAYLHSHGICHRDIKPQNILV |
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| Kinase | CAMKL-S1_b.AA | LKB | 258-293 | 41 | 1.6e-11 | 30.5 | In-house | 115-150 (265) | Show / Hide |
Range on Protein: 258-293 Range on HMM: 115-150/265 Sequence Identity: 41% (15 aa) EGLRHLHGKGILHRDVKPDNMLVFKGNVLKINDYDV .|. || ....|.|.||.|.|. .|.||| |. | DGCEYLHSQRVVHKDIKPGNLLLTHDNTLKICDFGV |
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| Kinase | CAMKL-S1_b.AA | Ciliate-B2 | 252-315 | 34 | 1.7e-10 | 20.77 | In-house | 109-172 (197) | Show / Hide |
Range on Protein: 252-315 Range on HMM: 109-172/197 Sequence Identity: 34% (22 aa) MWNQAFEGLRHLHGKGILHRDVKPDNMLVFKGNVLKINDYDVSCFKTDRQELRRKVDTRGYHSP | .| ..|| .. . ||| |.||.| |. . . . |. .|. | | | | | | || MIFQLIDGLIQFRMYNILHLDIKPQNILFMQNGNYVYCDFGISSIKKDNQQIKIKGFTKKYASP |
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| Kinase | CAMKL-S1_b.AA | TKL | 259-315 | 18 | 2.3e-10 | 33.55 | In-house | 144-242 (364) | Show / Hide |
Range on Protein: 259-315 Range on HMM: 144-242/364 Sequence Identity: 18% (18 aa) GLRHLHG--------KGILHRDVKPDNMLVFKGNV--------------LKINDYDVSCFKTDRQE--------------------LRRKVDTRGYHSP |. .|| ..|.||| |..| ||.. . .|| |. | |.. ... . ... | .. .| GMNYLHSMNPKWCTKPPIIHRDLKSKNILVDENWTNVSNYMYNPNADWCCKICDFGLSRFMSQSGNMNDTMTTMMESAEHQNNRKTTMTQCGTPRWMAP |
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| Kinase | CAMKL-S1_b.AA | CAMK | 258-315 | 17 | 4.1e-10 | 28.05 | In-house | 190-289 (425) | Show / Hide |
Range on Protein: 258-315 Range on HMM: 190-289/425 Sequence Identity: 17% (17 aa) EGLRHLHGKGILHRDVKPDNMLVFKG-----------------NVLKINDYDVSCFKTD------------------------RQELRRKVDTRGYHS-P ......| ..| ||| ||.| |. . | .|| | ...... | .. . | .| . | SAVHYCHSHNIVHRDLKPENILLDDNNDDSDPVEHDEIFDWNNNNIKIIDFGFANKFDPGENNFMCSDYKGGEMHNQWTTPTEGQKMKTFCGTPEYMAAP |
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| Kinase | CAMKL-S1_b.AA | nmo | 255-291 | 54 | 4.7e-10 | 26.49 | In-house | 110-146 (292) | Show / Hide |
Range on Protein: 255-291 Range on HMM: 110-146/292 Sequence Identity: 54% (20 aa) QAFEGLRHLHGKGILHRDVKPDNMLVFKGNVLKINDY | ||. || .|||||.|| |.|| |||| |. QILRGLKYLHSANILHRDIKPGNLLVNSNCVLKICDF |
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| Kinase | CAMKL-S1_b.AA | Ciliate-E2 | 251-290 | 29 | 8.8e-10 | 29.74 | In-house | 150-199 (365) | Show / Hide |
Range on Protein: 251-290 Range on HMM: 150-199/365 Sequence Identity: 29% (16 aa) MMWNQAF--------------EGLRHLHGKG-ILHRDVKPDNMLVFKGNVLKIND .|. .. ..|..|| |. |.||| ||.| |. .|| | IMKQILQGFKTKAEFYIACIILALEYLHSKNNIIHRDIKPENILF-----IKIID |
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| Kinase | CAMKL-S1_b.AA | AGC | 259-279 | 52 | 1e-09 | 19.75 | In-house | 165-187 (395) | Show / Hide |
Range on Protein: 259-279 Range on HMM: 165-187/395 Sequence Identity: 52% (12 aa) GLRHLHG-KGILHRD-VKPDNML .| .|| .|| ||| .||.|.| ALEYLHSHMGIIHRDYLKPENIL |
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| Kinase | CAMKL-S1_b.AA | CDK-Unclassified | 252-296 | 38 | 1.8e-09 | 27.14 | In-house | 126-175 (324) | Show / Hide |
Range on Protein: 252-296 Range on HMM: 126-175/324 Sequence Identity: 38% (19 aa) MWNQAFEGLRHLHGKGILHRDVKPDNMLVFKGN-----VLKINDYDVSCF . | .||. || ..| |||.|| | .. | .||| | .|| FMHQMLEGIAYLHCNKIMHRDIKPQNIMITNNNSTVSPMLKIADFGQACF |
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| Kinase | CAMKL-S1_b.AA | Pkinase | 257-302 | 31 | 1.1e-07 | 28.25 | Pfam | 118-167 (293) | Show / Hide |
Range on Protein: 257-302 Range on HMM: 118-167/293 Sequence Identity: 31% (16 aa) FEGLRHLHGKGILHRDVKPDNMLVF-KGNV---LKINDYDVSCFK-TDRQE ..|| ..| .||.|||.||.| |. .|.. .|| | ..... . ... LRGLEYCHSMGIIHRDLKPENILIDNNGHIDACVKICDFGLAKQFDY-NNS |
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| S_TKc | CAMKL-S1_b.AA | S_TKc | 160-364 | 17 | 2.8e-07 | -70.14 | SMART | 1-220 (231) | Show / Hide |
Range on Protein: 160-364 Range on HMM: 1-220/231 Sequence Identity: 17% (42 aa) ISDLNIVAYGHKSLVMLRRSRS----TVLKICLPADAGTERAIHSASDDHPNLRQLLKWGTVDVGNREGVFQFLEL---DGFGEPFSAKHV-----SDLA |... | . |.. | .. .|| .. |..|.. .|||. .|. . .. |. ... | | . .. . YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK-EHIRREIQILKK--HHPNIVKLYDVFQD--DHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPE- STGMMWNQAFEGLRHLHGKGILHRDVKPDNMLVFKGNVLKINDYDVSCFKTDRQELRRKVDTRGYHSPSSMQPYKE-GDDILSLALAFYSAKLGIT---- . . | ...| ..| .||.|||.||.| |. . ..|| | .... . . |. | .| . .| |. |. .| | . HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE--HIKICDFGLARQL------TTFCGTPWYMAPEVL-GYGKCKCDWWSCGCILYEMLCGYPPFPQ --KSSRGACRSYDAV--------W-----IRACSLLA . . . | .| . . | .|. MQMMFKKIG-SPEAKDFIRKCLQKDPEKRPTA-EALQ |
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