Gene CAMK1c-S5_x (S.moellendorffii)
CAMK1c-S5_x
Species: S.moellendorffii
Alias: CAMK1c-S5_x
External Links:
Annotation:
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| CAMK1c-S5_x.AA | Protein | None | 406 | None | Fasta, JSON |
| CAMK1c-S5_x.NA | RNA | None | 1221 | None | Fasta, JSON |
| CAMK1c-S5_x.kin_dom | Protein Kinase Domain | None | 114 | None | Fasta, JSON |
Protein domains of CAMK1c-S5_x.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| Kinase | CAMK1c-S5_x.AA | AGC | 257-370 | 16 | 8.8e-34 | 83.44 | In-house | 194-395 (395) | Show / Hide |
Range on Protein: 257-370
Range on HMM: 194-395/395
Sequence Identity: 16% (35 aa)
VVIGDFGVATDDPKE-----------------------------------------------------MSQCCG--TGKYMAPEVTSCKGDARSQSFYTA
. . ||| .. ... . || | |||||. |.
IKLTDFGLCKEGMNDGEKGQQSQSNMKFHWHNKKYQKSNMDTNKCNPNNWQRNNMSQEDDTTRKKRDRTWTFCGPCTPEYMAPEIL-----------YGK
AIDVWA--LGVIAYELLRG--------------------YKQSREIELLRAGEFPDGCP------------LSDEAEDLICGMLAVEPSERLT-------
| | |. ||.. ||.| | . . .. .. ... | .|.|| ||| ..| ..|..||.
ACDWWSFGLGCLMYEMLTGYPPFYGDNPQENRHPFRNPMEMFQKIMNGRYFINWKVKFPFPEDPQFPEDRWFSPEAKDLIKKLLCKDPEKRLGCGGNDFG
---LDGVLEHPWI
. . .|||
DKGAEEIKNHPWF
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| Kinase | CAMK1c-S5_x.AA | CAMK | 257-370 | 23 | 1e-28 | 89.05 | In-house | 235-425 (425) | Show / Hide |
Range on Protein: 257-370 Range on HMM: 235-425/425 Sequence Identity: 23% (44 aa) VVIGDFGVATDDPK--------------------------EMSQCCGTGKYMA-PEVTSCKGDARS-------QSFYTAAIDVWALGVIAYELLRGY--- . | ||| |. .. |. .||| ||| ||| . || . . |. ..|.|..||| | .| || IKIIDFGFANKFDPGENNFMCSDYKGGEMHNQWTTPTEGQKMKTFCGTPEYMAAPEVLNGKGHCNMQNATDEEKPYYGPKCDMWSCGVILYIMLCGYPPF ---KQSREIE-------------LLRAGEFP-DGCP-----------------------LSDEAEDLICGMLAVEPSERLTLDGVLEHPWI ......| ..|.. . . .|.|. |||..|| |.|..|.|.. .|.|||. YGDCDNEICEDEWIGMNDYELFEKIMKGKYDFPPPYFSPISCNYGPEWWDDISDEFHHFVSQECKDLIRKMLQVDPEKRMTIEQCLNHPWM |
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| Kinase | CAMK1c-S5_x.AA | Pkinase | 257-370 | 25 | 1.7e-24 | 87.73 | Pfam | 151-293 (293) | Show / Hide |
Range on Protein: 257-370 Range on HMM: 151-293/293 Sequence Identity: 25% (39 aa) VVIGDFGVA----TDDPKEMSQCCGTGKYMAPEVTSCKGDARSQSFYTAAIDVWALGVIAYELLRG---YKQS------REIELLRAGEF-------PDG | |.|||.| . |. ||| |||||| ... |. ..|.|..|.| ||.| | .... ....... | VKICDFGLAKQFDY-NNS-MTTFCGTPWYMAPEVIR------GGQYYGPKVDMWSCGCILYEMLCGRPPFPGHCWHDNHDQMQMICRIMGPPLHFDWPWW CPLS-----------------DEAEDLICGMLAVEPSERLTLDGVLEHPWI |. | .|. |.|...|.. |..|.| . .|.|||. CSISYFFFRHWHFHWTFHNWSEECKDFIKWCLCKDPKKRPTAEQILQHPWF |
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| Kinase | CAMK1c-S5_x.AA | CAMKL | 257-370 | 23 | 5.5e-22 | 66.83 | In-house | 168-297 (297) | Show / Hide |
Range on Protein: 257-370 Range on HMM: 168-297/297 Sequence Identity: 23% (33 aa) VVIGDFGVAT--DD-----PKEMSQCCGTGKYMAPEVTSCKGDARS--QSFYTAAIDVWALGVIAYELLRGY--------------KQSREIELLRAGEF . | ||| .. .. . .. .||. |||||. . . .... ..|.|..||| | .. || . .. . . | . IKIIDFGFSNMYRPCIFGPGQKLKTFCGSPPYMAPEIFQ------GNNKPYDGPKVDIWSCGVILYAMVCGYLPFDDDTYNKQGKDNI-YLYWKIMCG-Y PDGCP--LSDEAEDLICGMLAVEPSERLTLDGVLEHPWI . . .| ...||| .|| | |..| |.. ...||| YPPIWYHVS-DCRDLIRKMLQVNPEKRPTIHQIMNHPWM |
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| Kinase | CAMK1c-S5_x.AA | MARK | 261-370 | 32 | 2.4e-20 | 63.34 | In-house | 149-262 (262) | Show / Hide |
Range on Protein: 261-370 Range on HMM: 149-262/262 Sequence Identity: 32% (39 aa) DFGVATDDPKEM--SQCCGTGKYMAPEVTSCKGDARSQSFYT-AAIDVWALGVIAYELLRGY---KQSR--EIEL---LRAGEFPDGCPLSDEAEDLICG ||| .. | .. . .||| |||||... | |. ..|.|.|||. | .. || . . . || ..|... | .|.|...||. DFGFSICIPPGQKLNTFCGTPPYMAPEIFLKKP-------YDGPKVDIWSLGVVLYFMVCGYFPFDGDTQDYKELYKKILRGKYDIPCHVSKECRNLIQR MLAVEPSERLTLDGVLEHPWI .| | |.|| |.. ...|||. LLTVNPEERPTIEEIMKHPWM |
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| Kinase | CAMK1c-S5_x.AA | Ciliate-E2 | 257-370 | 24 | 3e-20 | 66.21 | In-house | 195-365 (365) | Show / Hide |
Range on Protein: 257-370
Range on HMM: 195-365/365
Sequence Identity: 24% (43 aa)
VVIGDFGVATDDPKE------MSQC----------------------------CGTGKYMAPEVTSCKGDA--RSQSFYTAAIDVWALGVIAYELLRGYK
. | ||| ... .. ..|| ||| |||||. . |.. | |. ..|.|.|||| ||.| |.
IKIIDFGLSKKYDDDNQNRTHKQQCKWYMFKNDTSRTPGYMDQIIQQNMFNTICGTPGYMAPEILNGKKYDNQQKQKGYDYKCDIWSLGVILYEMLFGKP
-QSREIELLRAGEFPDGCP------------------LSDEAEDLICG----MLAVEPSERLT-LDGVLEHPWI
.. ... || .|.|. ||| || ..|..|.| . .|.|||.
PF---QQQIKQCKIDFPCPEWQKDTQCIQCKWKSWKKWSQECKDLIKKFGKRMLQKDPEKRITGWEQILNHPWF
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| Kinase | CAMK1c-S5_x.AA | ULK | 259-370 | 26 | 2.4e-19 | 64.28 | In-house | 183-329 (329) | Show / Hide |
Range on Protein: 259-370
Range on HMM: 183-329/329
Sequence Identity: 26% (39 aa)
IGDFGVATD-DPK------EMSQC-----CGTGKYMAPEVTSCKGDARSQSFYTAAIDVWALGVIAYELLRGY-----KQSRE-I-----ELLRAG----
|.||| | | .|.. ||| ||||.. . .| . .|.. |.| ||.| ||.| |. .. . .|.. .
IADFGFAKHVDNDNMEQQMMMTCVNEKRLCGTPLYMAPQILQGQG--EQKPYYDYKCDIWSLGCIFYEMLYGKPPFYAW-FNDQYLQIIQKLINNPPPWP
--------EFP---DGCPLSDEAEDLICGMLAVEPSERLTLDGVLEHPWI
.|| .. ..|.| .||| .|| .....| . . ...|||.
QQIKKQPLQFPKDGNDPQISPECKDLIRRMLQYDEKDRISWEELFNHPWF
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| Kinase | CAMK1c-S5_x.AA | Aur | 338-370 | 48 | 3.2e-19 | 46.87 | In-house | 225-257 (257) | Show / Hide |
Range on Protein: 338-370 Range on HMM: 225-257/257 Sequence Identity: 48% (16 aa) PLSDEAEDLICGMLAVEPSERLTLDGVLEHPWI ..|.|| |||.. | ..|..|.||| ...|||| HISKEAKDLISKILQHDPKQRMTLDQIMNHPWI |
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| Kinase | CAMK1c-S5_x.AA | ULK | 259-370 | 26 | 1.1e-17 | 59.31 | In-house | 179-324 (324) | Show / Hide |
Range on Protein: 259-370
Range on HMM: 179-324/324
Sequence Identity: 26% (39 aa)
IGDFGVATD-DP-----KEMSQCC------GTGKYMAPEVTSCKGDARSQSFYTAAIDVWALGVIAYELLRGY------KQSREI---ELLRAG------
|.||| | | . .|. || ||||.. . .| . .|.. |.| ||.| ||.| |. ... .. .|.. |
IADFGFAKHVDNNNMEQQMCQTCVNEKRIKGTPLYMAPQILQGQG--EQKPYYDYKCDIWSLGCIFYEMLYGKYPFFSWFNDQYLYIQKLINNGKEQQIY
------EFPDGC---PLSDEAEDLICGMLAVEPSERLTLDGVLEHPWI
.||... ..|.| .||| .|| .....| . . ...|||.
IKNQPIQFPKPPKDPKISPECKDLIRRMLQYDEKDRISWEEIFNHPWF
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| S_TKc | CAMK1c-S5_x.AA | S_TKc | 179-370 | 20 | 8.6e-15 | 39.97 | SMART | 1-231 (231) | Show / Hide |
Range on Protein: 179-370
Range on HMM: 1-231/231
Sequence Identity: 20% (53 aa)
YTRGQRLGCGSQGQVFVLKGAT---SYAGKMFRAGRDAGRELRLMSKLRGCAGVVSLAGFVK--------ERSGG---------ACYGT-----------
|. .. .| |. |.|. . .| |. . ... ||.....| .. .| | .. | .| .|.
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK--EHIRREIQILKK--HHPNIVKLYDVFQDDHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPEHA
-----------------------------MLGAAAVHEVVIGDFGVATDDPKEMSQCCGTGKYMAPEVTSCKGDARSQSFYTA-AIDVWALGVIAYELLR
.| .. |.|||.|. . .||| |||||| |. ..|.|..|.| ||.|
RFYMYQICCALEYCHSHGIIHRDLKPENILLDE----HIKICDFGLARQL----TTFCGTPWYMAPEVL----------GYGKCKCDWWSCGCILYEMLC
GYK--QSREIELLRAGEFPDGCPLSDEAEDLICGMLAVEPSERLTLDGVLE-------HPWI
|| . . .... |.|| |.|...| ..|..|.| .|. |||.
GYPPFP-QMQMMFKKIG-------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
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| Kinase | CAMK1c-S5_x.AA | CAMK1 | 340-370 | 50 | 1.3e-14 | 38.8 | In-house | 245-276 (276) | Show / Hide |
Range on Protein: 340-370 Range on HMM: 245-276/276 Sequence Identity: 50% (16 aa) SDE-AEDLICGMLAVEPSERLTLDGVLEHPWI ||. | |.|..|| |.|..|.| . .|.|||| SDQEAKDFIKHMLEVDPKKRYTCEQCLNHPWI |
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| Kinase | CAMK1c-S5_x.AA | CAMK1 | 255-319 | 40 | 7.2e-14 | 36.64 | In-house | 148-213 (276) | Show / Hide |
Range on Protein: 255-319 Range on HMM: 148-213/276 Sequence Identity: 40% (28 aa) HEVV--IGDFGVA--TDDPK-EMSQCCGTGKYMAPEVTSCKGDARSQSFYTAAIDVWALGVIAYELLRGY .... | ||| . .|. |...||| |.|||| || .| |.|.| ||| | || || SKIKRSIADFGLSKIFDHDENLMKTACGTPGYVAPEVLECKK----DKPYDKACDMWSIGVITYILLCGY |
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| Kinase | CAMK1c-S5_x.AA | Ciliate-E2-Unclassified | 256-319 | 30 | 9.4e-12 | 37.07 | In-house | 185-267 (352) | Show / Hide |
Range on Protein: 256-319 Range on HMM: 185-267/352 Sequence Identity: 30% (26 aa) EVVIGDFGVAT---DD---------------PKEMSQCCGTGKYM----APEVTSCKGDARSQSFYTAAIDVWALGVIAYELLRGY .. | ||| . .. ...|...||| || |||| .. | . ..|.|.||||.||.| || YIKIIDFGISKKYQQNNNCDTNQQQKMQIWKQQMMWTFCGTPNYMPQYTAPEVLQGQNYDHSKA---YKCDIWSLGVILYEMLFGY |
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| Kinase | CAMK1c-S5_x.AA | Aur | 276-319 | 38 | 1.8e-09 | 20.61 | In-house | 162-198 (257) | Show / Hide |
Range on Protein: 276-319 Range on HMM: 162-198/257 Sequence Identity: 38% (17 aa) CGTGKYMAPEVTSCKGDARSQSFYTAAIDVWALGVIAYELLRGY ||| ||.||. ..|. . .|.|.|||..|||. |. CGTLDYMPPEM------VEGQM-HDHKVDIWCLGVLCYELCHGC |
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| Kinase | CAMK1c-S5_x.AA | Ciliate-E2-Unclassified | 339-370 | 38 | 2.9e-09 | 28.31 | In-house | 317-352 (352) | Show / Hide |
Range on Protein: 339-370 Range on HMM: 317-352/352 Sequence Identity: 38% (14 aa) LSDEAEDLIC----GMLAVEPSERLTLDGVLEHPWI .|.||.|.| || . |..|.|.. .|.|||. WSPEAKDFINDLLQKMLKKNPNKRITFEQILNHPWF |
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| Kinase | CAMK1c-S5_x.AA | TyrKc | 179-370 | 17 | 8.3e-05 | -144.92 | SMART | 1-280 (280) | Show / Hide |
Range on Protein: 179-370 Range on HMM: 1-280/280 Sequence Identity: 17% (51 aa) YTRGQRLGCGSQGQVF--VLKGATSYAGKMFRAGRDAG---RELRLMSKL----------RGCAGVV--------------------SLAGFVKERSGGA | |. ||.| |.|. ..| . | || ... ||.|.|.|| |.. .| . ... . ITLGKKLGEGAFGEVYKGTWK--IQVAVKMLKEDA-REDFMREARIMCKLGGHHPNIVRLYGVCTQQGRNFMYIEPLMIVMEYMPHGDLKDYLRKHRPKL CYGTMLGAAA-------------------------VHEVV---IGDFGVATDDPKE--------MSQC----CGTG----KYMAPEVTSCKGDARSQSFY | ..| . |.| |.||| . | . . .| . . ||||. . . CMKDLLSFCWQIACGMEYLHSKNCIHRDLAARNCLVGENHTVKISDFGLSRDIYDDDQQGESKDYYRKKEHKGGKTMLPIRWMAPECI-------NYGKF TAAIDVWALGVIAYELL-RGYKQSRE-----------IELLRAGEFPDGCPL---------SDEAEDLICGMLAVEPSERLTLDGVLEHPWI | . |||. || .|.. .| . . ||....|. .. | .|| ... . .|..| | . | . TTKSDVWSFGVCMWEIFTYGQQPYPGMIQQMMSNQEVIEYVKQGYRMPQPPNDYPMSFVCCPDEMYQIMKQCWHEDPEDRPTFSEI--HECF |
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| Kinase | CAMK1c-S5_x.AA | MARK | 179-195 | 29 | 0.192946 | 0.67 | In-house | 1-17 (262) | Show / Hide |
Range on Protein: 179-195 Range on HMM: 1-17/262 Sequence Identity: 29% (5 aa) YTRGQRLGCGSQGQVFV | .. .|.|| ..| . YKMLKTIGHGSYAKVKL |
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| Kinase | CAMK1c-S5_x.AA | CAMKL | 179-193 | 53 | 0.214564 | 0.04 | In-house | 1-15 (297) | Show / Hide |
Range on Protein: 179-193 Range on HMM: 1-15/297 Sequence Identity: 53% (8 aa) YTRGQRLGCGSQGQV |. |. ||.|| |.| YRIGKTLGKGSFGKV |
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| Kinase | CAMK1c-S5_x.AA | Pkinase | 179-208 | 27 | 7.053623 | 0.65 | Pfam | 1-33 (293) | Show / Hide |
Range on Protein: 179-208 Range on HMM: 1-33/293 Sequence Identity: 27% (9 aa) YTRGQRLGCGSQGQVFVLKGATS---YAGKMFR |..|...| || |.|. . . .| | .. YHIGRKIGSGSFGCVYKCHHKGTGKIVAVKIIK |
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