Gene CAMK1c-S5_d (S.moellendorffii)

CAMK1c-S5_d

Species: S.moellendorffii
Alias: CAMK1c-S5_d
External Links:
Annotation:

Classification

Group: CAMK
Family: CAMK1
Subfamily: CAMK1c

Sequence

Name Sequence Type Origin Length Description Download
CAMK1c-S5_d.AA Protein None 238 None Fasta, JSON
CAMK1c-S5_d.NA RNA None 717 None Fasta, JSON
CAMK1c-S5_d.kin_dom Protein Kinase Domain None 96 None Fasta, JSON

Protein domain

Protein domains of CAMK1c-S5_d.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CAMK1c-S5_d.AA AGC 105-146 36 1.2e-14 32.78 In-house 266-299 (395) Show / Hide 
Range on Protein: 105-146
Range on HMM: 266-299/395
Sequence Identity: 36% (17 aa)

CG--TEKYMAPEVMATKGRKGESQSFYTAAIDVWG--LGVIAYELL
||  |  |||||.             |. | | |.  ||.. ||.|
CGPCTPEYMAPEIL------------YGKACDWWSFGLGCLMYEML
S_TKc CAMK1c-S5_d.AA S_TKc 20-199 17 6.7e-14 26.94 SMART 1-231 (231) Show / Hide 
Range on Protein: 20-199
Range on HMM: 1-231/231
Sequence Identity: 17% (46 aa)

YMRGKQLGCGGQGQVFMIHNGR--NTYAGKLFRSGSDAEREARLMSKLHACPGVVSFKGFVRERDGAKCYGTIVMELCD-----LHREMSK---------
|  ....| |. |.|.  .. .    .| |  .   ...|| ....|   .| .| .... ..      .  .|||.||     |.. . |         
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK--EHIRREIQILKK--HHPNIVKLYDVFQD-----DHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFP

-----------------------------------------------------YCGTEKYMAPEVMATKGRKGESQSFYTA-AIDVWGLGVIAYELLR--
                                                     .|||  ||||||.            |.  ..|.| .|.| ||.|   
FPEHARFYMYQICCALEYCHSHGIIHRDLKPENILLDEHIKICDFGLARQLTTFCGTPWYMAPEVL-----------GYGKCKCDWWSCGCILYEMLCGY

-SYKSRMEIDFLRAGAFPTGFGSDQVEDLLQGMLAVELSKRVTLDRVLA-------HPWI
  .    .   ..         |... |.....| .. .|| |   .|.       |||.
PPFP--QMQMMFKKIG------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase CAMK1c-S5_d.AA Pkinase 99-146 37 1.5e-11 41.9 Pfam 167-206 (293) Show / Hide 
Range on Protein: 99-146
Range on HMM: 167-206/293
Sequence Identity: 37% (18 aa)

REMSKYCGTEKYMAPEVMATKGRKGESQSFYTAAIDVWGLGVIAYELL
. |. .|||  ||||||         ... |. ..|.|..|.| ||.|
S-MTTFCGTPWYMAPEVIR-------GGQYYGPKVDMWSCGCILYEML
Kinase CAMK1c-S5_d.AA MSK 104-146 43 4.9e-11 33.55 In-house 165-204 (277) Show / Hide 
Range on Protein: 104-146
Range on HMM: 165-204/277
Sequence Identity: 43% (19 aa)

YCGTEKYMAPEVMATKGRKGESQSF-YTAAIDVWGLGVIAYELL
.|.|  |||||. ..    |..|   | .|.|.|.|||| |..|
PCFTLHYMAPEMLRR----GYAQDGGYDEACDWWSLGVILYTML
Kinase CAMK1c-S5_d.AA CAMK 97-146 31 5e-10 27.76 In-house 263-328 (425) Show / Hide 
Range on Protein: 97-146
Range on HMM: 263-328/425
Sequence Identity: 31% (21 aa)

LHRE----------MSKYCGTEKYMA-PEVMATKGRK------GESQSFYTAAIDVWGLGVIAYELL
. ..          |. .|||  ||| |||   ||..       | .  |. ..|.| .||| | .|
M-HNQWTTPTEGQKMKTFCGTPEYMAAPEVLNGKGHCNMQNATDEEKPYYGPKCDMWSCGVILYIML
Kinase CAMK1c-S5_d.AA CAMK 169-199 35 6.6e-10 27.37 In-house 387-425 (425) Show / Hide 
Range on Protein: 169-199
Range on HMM: 387-425/425
Sequence Identity: 35% (14 aa)

SDQ--------VEDLLQGMLAVELSKRVTLDRVLAHPWI
||.        . ||...|| |. .|| |.. .|.|||.
SDEFHHFVSQECKDLIRKMLQVDPEKRMTIEQCLNHPWM
Kinase CAMK1c-S5_d.AA CAMKL 169-199 38 7.3e-10 27.5 In-house 268-297 (297) Show / Hide 
Range on Protein: 169-199
Range on HMM: 268-297/297
Sequence Identity: 38% (12 aa)

SDQVEDLLQGMLAVELSKRVTLDRVLAHPWI
| ...||...|| |  .|| |.. .. ||| 
S-DCRDLIRKMLQVNPEKRPTIHQIMNHPWM
Kinase CAMK1c-S5_d.AA DCAMKL 169-199 41 1.1e-09 25.68 In-house 249-279 (279) Show / Hide 
Range on Protein: 169-199
Range on HMM: 249-279/279
Sequence Identity: 41% (13 aa)

SDQVEDLLQGMLAVELSKRVTLDRVLAHPWI
||...|| . || |.  || |   ...|||.
SDSAKDLISHMLQVDPEKRYTAEQIMQHPWV
Kinase CAMK1c-S5_d.AA CAMK1 101-146 43 1.7e-09 23.72 In-house 170-210 (276) Show / Hide 
Range on Protein: 101-146
Range on HMM: 170-210/276
Sequence Identity: 43% (20 aa)

MSKYCGTEKYMAPEVMATKGRKGESQSFYTAAIDVWGLGVIAYELL
|.. |||  |.|||| . |        .|  |.|.|. ||| | ||
MKTACGTPGYVAPEVLECKK-----DKPYDKACDMWSIGVITYILL
Kinase CAMK1c-S5_d.AA Ciliate-E2 104-146 45 2.6e-09 28.11 In-house 247-290 (365) Show / Hide 
Range on Protein: 104-146
Range on HMM: 247-290/365
Sequence Identity: 45% (20 aa)

YCGTEKYMAPEVMATKGRKG-ESQSFYTAAIDVWGLGVIAYELL
.|||  |||||.   |.  . . |  |. ..|.| |||| ||.|
ICGTPGYMAPEILNGKKYDNQQKQKGYDYKCDIWSLGVILYEML
Kinase CAMK1c-S5_d.AA RSK 104-146 39 7.3e-09 28.91 In-house 168-206 (278) Show / Hide 
Range on Protein: 104-146
Range on HMM: 168-206/278
Sequence Identity: 39% (17 aa)

YCGTEKYMAPEVMATKGRKGESQSFYTAAIDVWGLGVIAYELL
.|.|  |||||. ..    .. |. ...| |.| |||. ||.|
FCYTIEYMAPEMLKR----ANQQGGHDKACDWWSLGVLMYEML
Kinase CAMK1c-S5_d.AA RAD53 169-199 45 1.8e-08 20.78 In-house 275-305 (305) Show / Hide 
Range on Protein: 169-199
Range on HMM: 275-305/305
Sequence Identity: 45% (14 aa)

SDQVEDLLQGMLAVELSKRVTLDRVLAHPWI
|. . || ..|| |.  || | | .| |||.
SEEAKDLIKWMLCVDPEKRYTIDEALNHPWM
Kinase CAMK1c-S5_d.AA RAD53 105-143 36 3.1e-08 20.09 In-house 187-232 (305) Show / Hide 
Range on Protein: 105-143
Range on HMM: 187-232/305
Sequence Identity: 36% (17 aa)

CGTEKYMAPEVMATKGR---KGESQS----FYTAAIDVWGLGVIAY
|||  | |||| ..||.    . . .     || . |.| .|.| |
CGTPQYVAPEVITSKGHNCYHENEERQVQVGYTKKVDCWSMGCILY
Kinase CAMK1c-S5_d.AA Ciliate-E2-Unclassified 105-146 39 3.4e-08 24.57 In-house 223-264 (352) Show / Hide 
Range on Protein: 105-146
Range on HMM: 223-264/352
Sequence Identity: 39% (18 aa)

CGTEKYM----APEVMATKGRKGESQSFYTAAIDVWGLGVIAYELL
|||  ||    ||||.  ..  ...      ..|.|.||||.||.|
CGTPNYMPQYTAPEVLQGQNYDHSKA----YKCDIWSLGVILYEML
Kinase CAMK1c-S5_d.AA Ciliate-E2-Unclassified 169-199 31 2.3e-07 21.62 In-house 318-352 (352) Show / Hide 
Range on Protein: 169-199
Range on HMM: 318-352/352
Sequence Identity: 31% (11 aa)

SDQVEDLLQ----GMLAVELSKRVTLDRVLAHPWI
|....|...     || . ..|| |.. .| |||.
SPEAKDFINDLLQKMLKKNPNKRITFEQILNHPWF
Kinase CAMK1c-S5_d.AA RSK 174-199 29 2.3e-07 23.35 In-house 248-278 (278) Show / Hide 
Range on Protein: 174-199
Range on HMM: 248-278/278
Sequence Identity: 29% (9 aa)

DLLQGMLAVELSKRVT-----LDRVLAHPWI
||...|| .. .|| .     ......|||.
DLIRKMLHRDPHKRLGCGPQDAEEIKQHPWF
Kinase CAMK1c-S5_d.AA AGC 169-199 21 2.8e-07 13.34 In-house 355-395 (395) Show / Hide 
Range on Protein: 169-199
Range on HMM: 355-395/395
Sequence Identity: 21% (9 aa)

SDQVEDLLQGMLAVELSKRVT----------LDRVLAHPWI
|..  ||....| .. .|| .           . . .||| 
SPEAKDLIKKLLCKDPEKRLGCGGNDFGDKGAEEIKNHPWF
Kinase CAMK1c-S5_d.AA CAMK1 169-199 46 3.1e-07 17.01 In-house 245-276 (276) Show / Hide 
Range on Protein: 169-199
Range on HMM: 245-276/276
Sequence Identity: 46% (15 aa)

SDQ-VEDLLQGMLAVELSKRVTLDRVLAHPWI
||| . |.. .|| |. .|| | . .|.||||
SDQEAKDFIKHMLEVDPKKRYTCEQCLNHPWI
Kinase CAMK1c-S5_d.AA Ciliate-E2 169-199 33 3.3e-07 20.79 In-house 330-365 (365) Show / Hide 
Range on Protein: 169-199
Range on HMM: 330-365/365
Sequence Identity: 33% (12 aa)

SDQVEDLLQG----MLAVELSKRVT-LDRVLAHPWI
|... ||..     || .. .|| |  . .| |||.
SQECKDLIKKFGKRMLQKDPEKRITGWEQILNHPWF
Kinase CAMK1c-S5_d.AA DCAMKL 105-146 40 2e-06 15.55 In-house 180-213 (279) Show / Hide 
Range on Protein: 105-146
Range on HMM: 180-213/279
Sequence Identity: 40% (17 aa)

CGTEKYMAPEVMATKGRKGESQSFYTAAIDVWGLGVIAYELL
|||  | |||... .|        |   .|.| .||| | ||
CGTPTYVAPEILMETG--------YGCKVDIWAAGVILYILL
Kinase CAMK1c-S5_d.AA MSK 174-199 34 3.3e-05 13.56 In-house 252-277 (277) Show / Hide 
Range on Protein: 174-199
Range on HMM: 252-277/277
Sequence Identity: 34% (9 aa)

DLLQGMLAVELSKRVTLDRVLAHPWI
||.|..| . ..|| ...  .|| |.
DLIQWLLTKDPKKRLGMNDLRAHEWK
Kinase CAMK1c-S5_d.AA CAMK 25-96 12 3.7e-05 11.79 In-house 1-143 (425) Show / Hide 
Range on Protein: 25-96
Range on HMM: 1-143/425
Sequence Identity: 12% (18 aa)

QLGCGGQGQVFMIHNGRNT--------------YAGKLFR---------------------------------SGSDAEREARLMSKLHA------CPGV
.|| |. |.|.   . ..|              .| |                                    .    .|| ..|.||..       | .
TLGRGSFGKVKLCIHKNTTGKERVHHIYTNGQKVAIKIIDKKKLKDKQNQDYSNCYKIDKSKCKHRYCWRRPKDRKNVRREIEIMKKLQGIGNKLDHPNI

VSFKGFVRERD---------GAKC-------YGTIVM---ELCD
...  .   ..           ..       .  .||   |.|.
IKLYEVYEDPHYFKNTNDYET-SKQVFTKDKHMYMVMEIMEYCS
Kinase CAMK1c-S5_d.AA CAMKL 105-143 32 0.000743 8.02 In-house 194-227 (297) Show / Hide 
Range on Protein: 105-143
Range on HMM: 194-227/297
Sequence Identity: 32% (13 aa)

CGTEKYMAPEVMAT-KGRKGESQSFYTAAIDVWGLGVIAY
||.  |||||. .  .      ....  ..|.| .||| |
CGSPPYMAPEIFQGNN------KPYDGPKVDIWSCGVILY
Kinase CAMK1c-S5_d.AA Pkinase 174-199 34 0.001806 13.35 Pfam 268-293 (293) Show / Hide 
Range on Protein: 174-199
Range on HMM: 268-293/293
Sequence Identity: 34% (9 aa)

DLLQGMLAVELSKRVTLDRVLAHPWI
|.. ..|..  .|| | . .| |||.
DFIKWCLCKDPKKRPTAEQILQHPWF
Pkinase CAMK1c-S5_d.AA Pkinase 20-96 21 0.008398 10.99 Pfam 1-83 (293) Show / Hide 
Range on Protein: 20-96
Range on HMM: 1-83/293
Sequence Identity: 21% (19 aa)

YMRGKQLGCGGQGQVFMIHNGRNT--YAGKLFRSGSDAE---------REARLMSKLHACPGVVSFKGFVRERDGAKCYGTIVMELCD
| .|...| |. |.|.  |.  .   .| | ..  .. .         .|...| .|. .| .| .......  . ..|  .|||.|.
YHIGRKIGSGSFGCVYKCHHKGTGKIVAVKIIKKRHEKSWKDQTHRRLSEIQIMKRLN-HPNIVRLYDWFED--KDHIY--MVMEYCE
Kinase CAMK1c-S5_d.AA CAMKL 20-43 41 0.008546 4.58 In-house 1-24 (297) Show / Hide 
Range on Protein: 20-43
Range on HMM: 1-24/297
Sequence Identity: 41% (10 aa)

YMRGKQLGCGGQGQVFMIHNGRNT
|  ||.||.|. |.| . .. |.|
YRIGKTLGKGSFGKVKLATHIRTT
Kinase CAMK1c-S5_d.AA MSK 24-49 38 0.059086 2.39 In-house 2-27 (277) Show / Hide 
Range on Protein: 24-49
Range on HMM: 2-27/277
Sequence Identity: 38% (10 aa)

KQLGCGGQGQVFMIHNGRNTYAGKLF
| || ||.| .| ..  ..  .|||.
KVLGTGGYGKFFICRKCVHHDTGKLY