Gene HisK_j (S.moellendorffii)

HisK_j

Species: S.moellendorffii
Alias: HisK_j
External Links:
Annotation:

Classification

Group: Atypical
Family: HisK

Sequence

Name Sequence Type Origin Length Description Download
HisK_j.AA Protein None 677 None Fasta, JSON
HisK_j.NA RNA None 2034 None Fasta, JSON

Protein domain

Protein domains of HisK_j.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
HisKA HisK_j.AA HisKA 5-61 40 1.3e-15 57.39 Pfam 10-69 (69) Show / Hide 
Range on Protein: 5-61
Range on HMM: 10-69/69
Sequence Identity: 40% (24 aa)

SHELRTPMAGIIGMLDILSC-DTLTPEQ--ETSVGQIRRCATGLLSMVNNVLDISKVEAG
|||||||...|.|....|   ..|.|||  .  .  |.|.|  .....|..||.|. |||
SHELRTPLTAIRGYAELLQDYTDLDPEQMRREYLETIQREAQRMQRLINDLLDFSRIEAG
HisKA HisK_j.AA HisKA 1-61 28 1.3e-12 49.11 SMART 6-89 (89) Show / Hide 
Range on Protein: 1-61
Range on HMM: 6-89/89
Sequence Identity: 28% (24 aa)

MTSFSHELRTPMAGIIGMLDILSC----------DTLTPEQ-------------ETSVGQIRRCATGLLSMVNNVLDISKVEAG
. . |||||||...|.|....|            ..|.|||             .  . .|.|.|  .....|..||.|. |||
LANMSHELRTPLTAIRGYAELLQDWYYKQRYHHWTDLDPEQRLPMLRREFNCEYREYLETIQREADRMQRLINDLLDLSRIEAG
HATPase_c HisK_j.AA HATPase_c 108-230 26 1.7e-34 121.82 SMART 1-130 (130) Show / Hide 
Range on Protein: 108-230
Range on HMM: 1-130/130
Sequence Identity: 26% (40 aa)

GDACRIRQIFSNLLSNSMKFTEN--------------GHIVIRGWADEKPEISSDGPSFINLIFEVDDTGCGIPS------HMHETVFDSFVQADA----
||. |.||...|||.|. |.|.               |.| .| .                 ...| |.|.|||       .. ...|. |...|     
GDPDRLRQVLWNLLDNAIKHTPEGHADPDLHDGKPGGGRITVRVH-----------------RITVEDNGPGIPPEMHKSIEDIPRIFEPFYRTDDSPSR

----SSTRIHGG--SGLGLYIVRSLVQKMGGEVQVICKQGPGTLIRFNIVMER
    |..| .||  .||||.|....|...||...|       | ..| . .||
MCPDSRSRKYGGGLTGLGLSICKRIVEQHGGTIWVE------TTFTFTLPLER
HATPase_c HisK_j.AA HATPase_c 108-229 32 2.6e-34 121.65 Pfam 1-120 (120) Show / Hide 
Range on Protein: 108-229
Range on HMM: 1-120/120
Sequence Identity: 32% (43 aa)

GDACRIRQIFSNLLSNSMKFTEN-GHIVIRGWADEKPEISSDGPSFINLIFEVDDTGCGIPS------HMHETVFDSFVQADA-SSTRIHGG--SGLGLY
||. |..|...||..|..|.|.  ||| .| ..|.            .....| |.|.|||       .. ...|. |...|. |. | .||  .|||||
GDPDRLHQVVWNLVDNAIKHTPEGGHITVRVHRDD-----------DHVRITVEDNGPGIPPEMHSIAEDIPRIFEPFYRTDPDSR-RKYGGGLTGLGLY

IVRSLVQKMGGEVQVICKQGPGTLIRFNIVME
|.| .|...||...|  . | || ..| . .|
ICRRIVEQHGGTIWVESEPGGGTTFTFTLPLE
Kinase HisK_j.AA HisK 112-229 23 2e-18 63.06 In-house 5-164 (164) Show / Hide 
Range on Protein: 112-229
Range on HMM: 5-164/164
Sequence Identity: 23% (40 aa)

RIRQIFSNLLSNSMKFTENG------HIVIR-------------GWADEKPEISSDGPSFI----------------NLIFEVDDTGCGIPSHMHETVFD
||.||  ||.||. |||..|      .| |                             ||                .. . | |||||.| .  .  |.
RIKQILINLISNALKFTQKGGIPFQGYIKIKVEQINTQNNIKYNS-------------IFIQKIQENMVQEQLQQKNLIQISVQDTGCGMPEEQQKKIFK

SFVQADA-------SSTRIHG-----GSGLGLYIVRSLVQKMG--------GEVQVICKQGPGTLIRFNIVME
 | . |.       .    ..     | ||||.| ..|....|        .. ||. ..| |.   | |   
MFGNIDDQHQMIKKTFNHQNKKNNQHGCGLGLTICNNLAKGLGPEHNQNGNRGIQVQSEVGKGSTFSFYIYNN
Response_reg HisK_j.AA Response_reg 606-665 30 4.8e-08 31.37 Pfam 1-52 (115) Show / Hide 
Range on Protein: 606-665
Range on HMM: 1-52/115
Sequence Identity: 30% (19 aa)

ILVVEDTPILQRMIGTILG-KLGA-EVTIVGDGQQAVTAVAKSVNELLKSQTLHFDLILMDC
.|.|.| |.... . .||  | |  .|. . ||..|.  .          |..|.|||.||.
VLIVDDHPLMREGLRQILEQKEGYEVVAEADDGEEALEWW----------QEHHPDLIIMDI