Gene TXNDC6 (Mouse)

TXNDC6

Species: Mouse
Alias: TXNDC6
External Links:
Annotation:

Classification

Group: NDK
Family: NDK

Sequence

Name Sequence Type Origin Length Description Download
TXNDC6.AA Protein None 329 None Fasta, JSON
TXNDC6.NA RNA None 987 None Fasta, JSON
TXNDC6.kin_dom Protein Kinase Domain None 138 None Fasta, JSON

Protein domain

Protein domains of TXNDC6.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
NDK TXNDC6.AA NDK 158-302 32 4.5e-57 196.83 SMART 1-142 (142) Show / Hide 
Range on Protein: 158-302
Range on HMM: 1-142/142
Sequence Identity: 32% (48 aa)

KTCTLGIIKPDAVAHGKAEEIIMKIQEAGFDILLKEERTLTEAEMQAFYQ-HRAREEAFERLVHHMCSGPSHLLILTKTEGTEDVVTAWRTFLGPCDPNV
. .|. .||||||..|. .|||......|| |.  ....||... . .|. ..  .. |..||..|.|||.. ...      |.... |||..|| .|.|
MERTFIMIKPDAVQRGLIGEIISRFERKGFKIVAMKMMQLTKEQAEEHYAVEHKGKPFFNDLVEFMTSGPVVAMVW----EGENAIKTWRTMMGPTNPEV

ARREHPESLRAQYGTEMPFNAVHGSRDREDANRELALLFPSFKFSD
.. ..|...|...||... |.||||   |.|.||.|..||.. . .
PKEAAPGTIRGDFGTDIGRNIVHGSDSPESAEREIAYWFPESEICE
NDK TXNDC6.AA NDK 160-300 31 8e-39 140.09 Pfam 2-140 (140) Show / Hide 
Range on Protein: 160-300
Range on HMM: 2-140/140
Sequence Identity: 31% (45 aa)

CTLGIIKPDAVAHGKAEEIIMKIQEAGFDILLKEERTLTEAEMQAFYQHRAREEAFERLVHHMCSGPSHLLILTKTEGTEDVVTAWRTFLGPCDPNVARR
 |. .||||||. |.  ||| .....|| |      .||... ...|.. .    |. || .|.|||   ... .    |...  ||...|. .|  |. 
RTFIMIKPDAVQRGLIGEIISRFERKGFKIVAMKMMHLTREQAEEHYAEHKGKPFFPDLVEFMTSGPVVAMVWEG----ENAIKKWREMMGATNPAEAK-

EHPESLRAQYGTEM--PF-NAVHGSRDREDANRELALLFPSFKF
|.| ..|.......     |.||||   |.|.||.|. || . .
EAPGTIRGDFAVSIYPGRRNVVHGSDSPESAEREIAFWFPPEEI