Gene FJB1 (Mouse)

FJB1

Species: Mouse
Alias: FJB1
External Links:
Annotation:

Classification

Group: PKL
Family: FJ

Sequence

Name Sequence Type Origin Length Description Download
FJB1.AA Protein None 450 None Fasta, JSON
FJB1.NA RNA None 2427 None Fasta, JSON
FJB1.kin_dom Protein Kinase Domain None 268 None Fasta, JSON

Protein domain

Protein domains of FJB1.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
FJ_kinase FJB1.AA FJ_kinase 160-427 27 1.8e-134 453.0 In-house 1-351 (351) Show / Hide 
Range on Protein: 160-427
Range on HMM: 1-351/351
Sequence Identity: 27% (98 aa)

GCGRSSNRLARFADGTRACVR---------------YGINPEQIQGEALSYYLARLLGLQRHVPPLALARVEARGAQWVQVQEE----------------
|||....|...||||.|||..               |..|.....|| ....|.|.|.......|... ||  .  .|..|...                
GCGTQLKRMFTFADGQRACFKPMWYPRDQEHVINHFYYQNYDRHNGEIAAFHLDRILNFRWNLAPPVVGRVVNMTTEWYPVATDQELQKTFFISPAKNNT

--LRTAHW-TEGSVVSLTRWLPNLTDVVV----PE-PWRSEDGRLRPLRDAGGELTNLSQAELV------------------------------------
  .. .|| .....|..|.|. ||.....    |  |.. ......|..    .. . ...|.                                     
CFYGKCHWYCDTEHVVCTDWE-NLMEGSITAWLPQEPFWPRKKWRHPWQRTYHKRHKKAEWETDQIRVRHGLLKRLGAAHQMNYCKEVKQKPPSPSPEEV

-----DLVQWTDLILFDYLTANFDRLVSNLFSLQWDPRVMHRATSNLHRGPG-GALVFLDNEAGLVHGYRVAGMWDKYNEPLLQSVCVFRERTARRVLEL
      |..|.|.|.||||..|.||.....|..||..|.|.|.|.||||.|. |.||.||||.|..|.|||...|..|.. .|...|.||..|..|..|.
YDHGRRLLDWIDMIVFDYLIGNMDRHHYETFNFQWNARIMERPTHNLHRQPDEGMLVHLDNEKGFGHPYRVLFHWELYHLAPLYQCCMFRRSTWQRLQEF

HRGQDA---AARLLRLYSRHEPRFPELAELSEPHAQLLQRRLDFLAKHILHC
|.|.|.   ..||. |. ...||.|..  |...|.. ||||.|.. ||..||
HNGPDVGRRLRRLFELMRESMPRDPLHPVLWDKHYKALQRRIDRVYKHVHHC