Gene BAZ1B (Mouse)

BAZ1B

Species: Mouse
Alias: BAZ1B
External Links:
Annotation:

Classification

Group: Atypical
Family: BAZ

Sequence

Name Sequence Type Origin Length Description Download
BAZ1B.AA Protein None 1479 None Fasta, JSON
BAZ1B.NA RNA None 6433 None Fasta, JSON

Protein domain

Protein domains of BAZ1B.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
WAC_Acf1_DNA_bd BAZ1B.AA WAC_Acf1_DNA_bd 20-120 38 1.8e-47 167.21 Pfam 1-102 (102) Show / Hide 
Range on Protein: 20-120
Range on HMM: 1-102/102
Sequence Identity: 38% (39 aa)

EPLFTIPHTQEAFRTREEYEARLERYSERIWTCKSTGSSQLTHKEAWEEEQEVAELLKEEFPNWYEKLVLEMVHHNTAS-LEKLVDSAWLEIMTKYAVGE
|. ...|||.|.||. ||| .|...|..|.|||..||.|.||. ||.|.|.. .. ....||.|... ||..|...| | |..||| .. ...... .||
EEVWYCPHTKEWFRDYEEYFNRMDFYNQRVWTCEITGKSCLTYFEALESEKHARKEVHKNFPEWLREPVLRFVQFSTISRLDDLVDQVYHYFKDDFFPGE

EC
..
TV
DDT BAZ1B.AA DDT 605-669 30 1.3e-19 72.43 SMART 1-65 (65) Show / Hide 
Range on Protein: 605-669
Range on HMM: 1-65/65
Sequence Identity: 30% (20 aa)

NTLFGDVALVVEFLSCYSGLL-LPDAQYPITAVSLMEALSADKGGFLYLNRVLVILLQTLLQDEIA
|..|||.  |.||.......| |..... .|  ...|||..... . ......|.||...|||| .
NEHFGDCLMVWEFCRSFGHVLGLWPFRA-CTFEDFCEALHCRRDQYCLMCEMHVVLLRAILQDEGE
PHD BAZ1B.AA PHD 1186-1234 40 7.3e-23 73.01 Pfam 1-54 (54) Show / Hide 
Range on Protein: 1186-1234
Range on HMM: 1-54/54
Sequence Identity: 40% (22 aa)

RCKVCRK--KGEDDKLILCD-ECNKAFHLFCLRPALY--EVPDGEWQCPACQPP
.|.||.|   ..|...|.|| .|...||..|. | |   |.|.|||.|| |.. 
YCCVCQKCDWDDDGDMICCDNGCPRWFHQYCHGPPLEPEEIPEGEWYCPRCKCC
PHD BAZ1B.AA PHD 1186-1232 41 7.7e-17 63.19 SMART 1-39 (39) Show / Hide 
Range on Protein: 1186-1232
Range on HMM: 1-39/39
Sequence Identity: 41% (20 aa)

RCKVCRKKGEDDKLILCD-ECNKAFHLFCLRPALYEVPDGEWQCPACQ
.| ||.|    . .|.||  |....|. ||.|.|  .||| |.|| |.
YC-VCGK----G-MIQCDPGCDRWYHQ-CLGPPLE-PPDG-WYCPRCR
RING BAZ1B.AA RING 1187-1231 17 0.000316 18.69 SMART 1-23 (23) Show / Hide 
Range on Protein: 1187-1231
Range on HMM: 1-23/23
Sequence Identity: 17% (8 aa)

CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC
| .|         . . .|.  |.  |.             || |
CPICLE-------PVVLPCGH-FCY-CI-------------CPIC
Zf-C3HC4 BAZ1B.AA zf-C3HC4 1187-1231 24 0.000342 13.17 Pfam 1-48 (48) Show / Hide 
Range on Protein: 1187-1231
Range on HMM: 1-48/48
Sequence Identity: 24% (12 aa)

CKVCRKKGEDDKLILCDECNKA-----FHLFCLRPALYEVPDGEWQCPAC
| .|.   .|.. .|  .|.       |. .|..  . .  .|..||| |
CWICHCEWKDPNNPLIHPCGHRGSLKWFCHSCIKRWWNH--SGNTQCPIC
BROMO BAZ1B.AA BROMO 1333-1441 26 1.4e-39 138.72 SMART 1-118 (118) Show / Hide 
Range on Protein: 1333-1441
Range on HMM: 1-118/118
Sequence Identity: 26% (32 aa)

ISRRQSLELQKCEDILHKLVKY--------RFSWPFREPVTRDE--AEDYYDVIEHPMDFQTIQNKCSCGNYRSVQEFLTDMKQVFANAELYNCRGSHVL
... |    .... ..... ..        ...|||..||.|.|  . ||||.|..|||..||..|.  . |.|..||. |....| |.  || ..|.| 
DPK-QKKCQELLKEVMCHKHDHGDPMNRGRPYAWPFMQPVDRKELNYPDYYDIIKNPMDLKTIKKKLENHQYQSMEEFVDDFMLMFNNCMTYNEPDSEVY

SCMEKTEQCLLALLQKHLP
....| .. ........ |
KMAKKLQKFFEEKWREFPP
Bromodomain BAZ1B.AA Bromodomain 1344-1427 37 5.8e-27 90.3 Pfam 1-89 (89) Show / Hide 
Range on Protein: 1344-1427
Range on HMM: 1-89/89
Sequence Identity: 37% (33 aa)

CEDILH--KLVKYRFSWPFREPV--TRDEAEDYYDVIEHPMDFQTIQNKCSCGNYR-SVQEFLTDMKQVFANAELYNCRGSHVLSCMEK
|. |.   .. .  ...||..||   ||| .||||.|.||||..|||.|   . || ...||. ||.... |.. || ..| .  . .|
CDQIMDMKYIMEHPICEPFWHPVDPDRDEYPDYYDIIKHPMDLSTIQQKLKNNKYRNNIAEFWHDMELMWHNCMTYNGPDSPIYKDARK