Gene CC1G_07019 (C.cinerea)

CC1G_07019

Species: C.cinerea
Alias: CC1G_07019
External Links:
Annotation:

Classification

Group: Other
Family: FunK1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_07019.AA Protein None 752 None Fasta, JSON
CC1G_07019.NA RNA None 2259 None Fasta, JSON
CC1G_07019.kin_dom Protein Kinase Domain None 427 None Fasta, JSON

Protein domain

Protein domains of CC1G_07019.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_07019.AA TAO 427-500 35 0.000384 9.11 In-house 104-167 (254) Show / Hide 
Range on Protein: 427-500
Range on HMM: 104-167/254
Sequence Identity: 35% (26 aa)

ILKQALIPLHLMFCAGWVHRDVSPGNILALRATSDEPWVVKLSDLEHAKRFPDPESPGEKNVTGTPYFIAYEII
| ..||  |. .     .|||.  ||||       |. .|||.|   |       .| .  | ||||..| |.|
ICHGALQGLRYLHSHKMIHRDIKAGNILLT-----EHGQVKLADFGSASMV----CPANSFV-GTPYWMAPEVI
Kinase CC1G_07019.AA Ciliate-E2 444-500 21 0.000608 9.4 In-house 183-259 (365) Show / Hide 
Range on Protein: 444-500
Range on HMM: 183-259/365
Sequence Identity: 21% (19 aa)

VHRDVSPGNILALRATSDEPWVVKLSDLEHAKRFPDP-----------ESPGEKN--------------------VTGTPYFIAYEII
.|||  | |||           .|..|.  .|.. |.           . .  ||                    . |||.. | ||.
IHRDIKPENILF----------IKIIDFGLSKKYDDDNQNRTHKQQCKWYMF-KNDTSRTPGYMDQIIQQNMFNTICGTPGYMAPEIL