Gene CC1G_07035 (C.cinerea)

CC1G_07035

Species: C.cinerea
Alias: CC1G_07035
External Links:
Annotation:

Classification

Group: Other
Family: FunK1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_07035.AA Protein None 771 None Fasta, JSON
CC1G_07035.NA RNA None 2316 None Fasta, JSON
CC1G_07035.kin_dom Protein Kinase Domain None 436 None Fasta, JSON

Protein domain

Protein domains of CC1G_07035.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_07035.AA SLK 412-484 31 9e-05 11.9 In-house 102-168 (259) Show / Hide 
Range on Protein: 412-484
Range on HMM: 102-168/259
Sequence Identity: 31% (23 aa)

ILKQCVTAMRLMYCAGWIHRDISVGNILAIRRASEGLWEMKLSDLEFARKFLDPEIQKDEKPIGTPFFMACEL
. |. . |.. ..    ||||.  ||||      .|  ...| |   . |    ..|| .  ||||..|| |.
VCKHMCEALNWLHSNKVIHRDLKAGNILMTM---DG--DVRLADFGVSAKNKH-TMQKRDTFIGTPYWMAPEV
Kinase CC1G_07035.AA ULK 408-481 27 0.000279 10.95 In-house 131-219 (329) Show / Hide 
Range on Protein: 408-481
Range on HMM: 131-219/329
Sequence Identity: 27% (25 aa)

EAIDILKQCVTAMRLMYCAGWIHRDISVGNILAIRR----ASEGLWE------MKLSDLEFARKFLDP--EIQKDEKPI------GTPFFMA
||| ..|| . ... ..  . |||||   |||         |.   .       |..|  ||... ..  |.|            ||| .||
EAIQFFKQILNGFKELHKHNIIHRDIKPQNILIHNGQPKTDSK---KVHPNGVLKIADFGFAKHVDNDNMEQQMMMTCVNEKRLCGTPLYMA
Kinase CC1G_07035.AA SAK 408-442 37 0.00033 9.93 In-house 101-135 (254) Show / Hide 
Range on Protein: 408-442
Range on HMM: 101-135/254
Sequence Identity: 37% (13 aa)

EAIDILKQCVTAMRLMYCAGWIHRDISVGNILAIR
|| ....| |. |  .   | .|||... |||  |
EARHFMHQIVIGMLYLHSHGIMHRDLTLSNILLTR
S_TKc CC1G_07035.AA S_TKc 258-555 12 0.000466 -117.41 SMART 1-231 (231) Show / Hide 
Range on Protein: 258-555
Range on HMM: 1-231/231
Sequence Identity: 12% (42 aa)

FHSDDPVGR--SARIWKVKQVFSPTDLRRVPGTSNRI--LKDVSLDARTVKPEVDIQRQLFADIADFGKRANWRSAEALKDMREEDMDAIADALHGENFK
..  ...|.   .. .|.. .            ..||  .| ..                                    .. .  ..      | .|  
YEILRKIGKGAFGKVYKCRHKK-----------TGRIVAIKIIK------------------------------------EHIRREIQILKK--HHPNIV

KYFSCIVASHVGKSHPYPALPLTDDAKSSCIPK--RQCFYLYEFICTPLWDIP-TLGEAIDILKQCVTAMRLMYCAGWIHRDISVGNILAIRRASEGLWE
|.. ...      .| |  . .        ..      | . .   .. .. | .  .|  ...| . |.  .   | ||||.   |||  .       .
KLYDVFQD-----DHLYMVMEY--------CDGDLGDLFDYIKKRGRHGLRFPFPE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE-------H

MKLSDLEFARKFLDPEIQKDEKPIGTPFFMACELQTGMPFVPGDDPTAETDHDS------------------DPEFSAEDFAPFLPILHSFQHDLESIWW
 |..|  .||..           .|||..|| |.                 ..                    | |. .... |  |.     . | .  
IKICDFGLARQL--------TTFCGTPWYMAPEVL---------------GYGKCKCDWWSCGCILYEMLCGYPPFP-QMQMMFKKIG-----SPEAKDF

IVLWLV-TARTRASFSRQWS-------QKYF
|   |.   . | .               .|
IRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase CC1G_07035.AA Ciliate-E2 404-481 19 0.000637 9.33 In-house 142-255 (365) Show / Hide 
Range on Protein: 404-481
Range on HMM: 142-255/365
Sequence Identity: 19% (24 aa)

PTLGEAIDILKQCVT---------------AMRLMYCAG-WIHRDISVGNILAIRRASEGLWEMKLSDLEFARKFLDP----------EIQKDEK-----
.|. |...| || .                |.. .   .  |||||   |||            |..|. ...|. |.          .. .. |     
FTEKEIKYIMKQILQGFKTKAEFYIACIILALEYLHSKNNIIHRDIKPENILF----------IKIIDFGLSKKYDDDNQNRTHKQQCKWYMF-KNDTSR

----------------PIGTPFFMA
                 .||| .||
TPGYMDQIIQQNMFNTICGTPGYMA