Gene CC1G_13701 (C.cinerea)

CC1G_13701

Species: C.cinerea
Alias: CC1G_13701
External Links:
Annotation:

Classification

Group: Atypical
Family: TAF1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_13701.AA Protein None 1054 None Fasta, JSON
CC1G_13701.NA RNA None 3165 None Fasta, JSON
CC1G_13701.kin_dom Protein Kinase Domain None 1 None Fasta, JSON

Protein domain

Protein domains of CC1G_13701.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
DUF3591 CC1G_13701.AA DUF3591 330-616 50 3.4e-154 523.35 Pfam 1-300 (494) Show / Hide 
Range on Protein: 330-616
Range on HMM: 1-300/494
Sequence Identity: 50% (154 aa)

YNL--SNDQYYEVSKEGARQHVRQTFGQLVVEHAYPAQKLQLPFYKTRLSKQEARSFHRPALQIP----ANIEIRFQKVRTAKKKKDK-HGRRLGKGGSA
.|.  |||.||.  ||  .. ||||.|.| .||. || .||.|.||..|.|.||||||||..|..    ..| .|| |    |.|.||  . | ||..| 
FNIIFSNDEYYDMLKENHQNKVRQTIGNLNIEHSMPALRLQWPYYKVKLNKREARSFHRPHFQFYIRPGTQIWVRFSKLKHRKRKHDKREKERMGKDIS-

GDALR--KTADLSLRDTSNFVLWEYSEEHPPIISNFGMGSALVNYYRKKDEKDEYVPKAD-LGIPFVLEPQDESPFMKFGYVYPGQTFPVLYNNLVRAPL
 . ..  .| ||.|.|.|...| ||.||.||..||||||| ..||||||...|. .||.| .| . || |||.|||..||.| ||.. | ||||. |||.
-EVFKMRTTKDLTLGDNSPVILMEYCEEYPPVMSNFGMGSKIINYYRKKHMEDTHRPKLDDIGETHVLHPQDKSPFWNFGHVHPGEIVPTLYNNMYRAPI

FRHKPESTDFLVIRNTV--KGESKYYIREIKNLFVIGQTYPVTEVPGPHSRKITNTIKHRLQIIAFKLLK--KSQGERLKISRLMKYF-PDQNELQMRQR
|.||||.||||.||.|   ....|||.|.| ..|. |||.||.|||||||||.||..| ||..|...|..  ||. .|..|....|.| |||||.|.|||
FKHKPEPTDFLCIRSTTPGGHGQKYYLRNIDHMFCVGQTFPVMEVPGPHSRKVTNMSKNRLKMIVYRLFWGQKSPRHRISIHDITKHFFPDQNEMQNRQR

LK
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LK
DUF3591 CC1G_13701.AA DUF3591 644-792 45 2e-66 231.78 Pfam 322-494 (494) Show / Hide 
Range on Protein: 644-792
Range on HMM: 322-494/494
Sequence Identity: 45% (79 aa)

HIKVSGD-AEMLKMVGPEQVVLTESMQVGQRHLQDAGYSQAEVS---------DGDES------KLSVEQQLAPWITTKNFLYATQAKAMLRLHGEGDPS
....  . .| .||. ||.. | |||||||.||.||||   . .         | ||.      |.. ||..|||.||.||. ||| ||||.|||||||.
GETLPDEFEEIRKMITPEDCCLYESMQVGQQHLEDAGYNNTDEFKRDYQQIQEDDDEETKKVQMKIDLEQMMAPWNTTRNFINATQGKAMLQLHGEGDPT

GRGEAFSFIRI-SMKDIFVKAGEDYEQKLAEAESRPKS----AHRYNVAEQQQIY---KSEIERIWKAQYDSL
|.||.|||||. ||| .|.|.||. . |...|. . ..     | ||||.|| .|     ||.||| .| .||
GCGEGFSFIRTKSMKGGFLKQGEGPQDKPKKAVAGTRAKERGGHSYNVAQQQRLYGVPEEEIRRIWYWQKRSL