Gene CC1G_04984 (C.cinerea)

CC1G_04984

Species: C.cinerea
Alias: CC1G_04984
External Links:
Annotation:

Classification

Group: Atypical
Family: RIO
Subfamily: RIO1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_04984.AA Protein None 590 None Fasta, JSON
CC1G_04984.NA RNA None 1773 None Fasta, JSON
CC1G_04984.kin_dom Protein Kinase Domain None 222 None Fasta, JSON

Protein domain

Protein domains of CC1G_04984.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_04984.AA RIO1 195-416 57 3.6e-129 435.44 In-house 1-225 (225) Show / Hide 
Range on Protein: 195-416
Range on HMM: 1-225/225
Sequence Identity: 57% (129 aa)

QVLDPRTRLILFKMIGRGLIHEVNGCVSTGKEANVYHATTPTKD--HLALKIYKTSILVFKDRSKYVTGEYRFRRGYSR-NPRKMVRLWAEKEMRNLRRL
||.|||||.|||||. ||.| |.|||.|||||.||||| .        | ||||||||||||| ||| ||.|||.|... |||||. .||||||||| |.
QVIDPRTRMILFKMLTRGIITEINGCISTGKETNVYHASETNGKRAEYAIKIYKTSILVFKDREKYVDGEFRFRHGHCKHNPRKMIKIWAEKEMRNLKRI

RAAGIESPEPVEVRENVLVMTFVGDRDGWASPRLKDAELTTDQMI-PLYSNLLCLIRTMYHDCKLVHADLSEYNILYHEGRLCIIDVSQSVEHDHPSAFD
  . |  |||..|. |||.| |.|  || |.|||||...     .  .|  ..   |.|| || ||||||||||.|||.. | .|||||||||||| . .
YQSEIPCPEPIMVKSNVLMMEFIGK-DGMAAPRLKDYQYKERDQYFHYYHQMIQYMRRMYQDCRLVHADLSEYNMLYHNDKLYMIDVSQSVEHDHPHSLE

FLRSDIKNVEEFFGKGGVQTLGIRKA
||| |.|||  .| | .| .. .|  
FLRMDCKNVNMYFMKHNVIIFPVRDI
RIO CC1G_04984.AA RIO 186-422 50 8e-121 408.61 SMART 1-253 (253) Show / Hide 
Range on Protein: 186-422
Range on HMM: 1-253/253
Sequence Identity: 50% (129 aa)

DKSDRATNEQVLDPRTRLILFKMIGRGLIHEVN--GCVSTGKEANVYHATT----PTKDHLALKIYKTSILVFKDRSKYVTGEYRFRRGYSR-NPRKMVR
|| |.|| |.|.|||||..|.||. || | |.|  ||.|||||||||||..    ..... | |||.||...||....|..|. ||. ||.. |.|||||
DKEDYATYEEVFDPRTRMTLYKMVNRGYIEEINNHGCISTGKEANVYHAMGGDFDKNGNECAVKIYRTSTTEFKRMWRYIQGDFRFKHGYHHINWRKMVR

LWAEKEMRNLRRLRAAGIESPEPVEVRENVLVMTFVGDRDGWASPRLKDAELTTDQMI---PLYSNLLCLIRTMYHDCKLVHADLSEYNILYH------E
||||||.|||.|. .||.  |.|...|..|||| |.|| |||. |||||.|.    |.   ..|. ... .| ||| |.||||||||||.|||      .
LWAEKEFRNLQRMYEAGVPCPKPIAWRRHVLVMEFIGD-DGWPAPRLKDVEWEEWEMDFKWEYYWQIMEYMRKMYHECHLVHADLSEYNMLYHDLEDEND

GRLCIIDVSQSVEHDHPSAFDFLRSDIKNVEEFFGKGGVQTLGI-RKAFEFVTK
. . |||.|||||.||| . .||. ||.|.  || . || .. | |..||..|.
CKVWIIDWSQSVECDHPMWLEFLERDIWNIINFFRRKGVDCDDIYREIFERITG
Kinase CC1G_04984.AA RIO 193-430 34 9.60000000001e-117 394.15 In-house 1-276 (276) Show / Hide 
Range on Protein: 193-430
Range on HMM: 1-276/276
Sequence Identity: 34% (96 aa)

NEQVLDPRTRLILFKMIGRGLIHEVNGCVSTGKEANVYHATTPTKD-----------HLALKIYKTSILVFKDRSKYVTGEYRFRRGYS-RNPRKMVRLW
 ||..||.||.|..||. || . .|..|...|||...||. .   .             |.||..|....|||| ||. ||..|. ...  |.|.|.|||
YEQTNDPYTRMIMYKMVNRGMVESVGNCIGVGKESDIYHCSNENGEDEKEDSKVIPTECAIKIHRTGRTSFKDRKKYRDGEFYFKHRHCKHNWRYMHRLW

AEKEMRNLRRLRAAGIESPEPVEVRENVLVMTFVGDRDGWASPRLKDAELT-TDQMIPLYSNLLCLIRTMYHDCKLVHADLSEYNILYHEGRL-------
|||||||. ||  .|.  |||.... .|||| | .  |. ..|.......   ..|  .|. ..|..|..|..| |||.|..|.|...|.| .       
AEKEMRNMKRLYQSGFPCPEPIDYKRHVLVMEFINH-DQMPAPKYPMCQIHEHENMKHVYHQCMCYMRRLYQHCRLVHCDFNEFNMMWHDGKHDENDCGF

CIIDVSQSVEHDHPSAFDFLRSDIKNVEEFFGKGGV-QTLGIRKAFEFV------------------TKEKLSEENE
 .||..|.|||||| | ...| |.|.|  || |..| ...  |  |.||                  . . | .||.
YMIDFPQMVEHDHPHALWYFRRDCKCVNMFFMKRFVYEPFPEREMFDFVGFGDGYKYAYPDFKRDVKRTDTLDHENM
Kinase CC1G_04984.AA RIO1 228-416 44 4e-102 318.96 Pfam 1-200 (200) Show / Hide 
Range on Protein: 228-416
Range on HMM: 1-200/200
Sequence Identity: 44% (89 aa)

NVYHATT-PTKD-HLALKIYKTSILVFKDRSKYVTGEYRFRRGY-SRNPRKMVRLWAEKEMRNLRRLRAAGIESPEPVEVRENVLVMTFVGDRDGWASPR
|||||.. .  . ..|.|||.|....||....|. ...||| .|  .|.|.|||.|||||.|||.|...||.  |.|......|||| |.||.|||. ||
NVYHAYSMEDGKDECAVKIYRTGTTCFKKMKRYRDYDFRFRHRYHHHNWRYMVRMWAEKEFRNLKRMYEAGVPCPKPIDWNRHVLVMEFIGDKDGWPAPR

LKDAE----LTTDQMIPLYSNLLC-LIRTMYHDCKLVHADLSEYNILYHEG-RLCIIDVSQSVEHDHPSAFDFLRSDIKNVEEFFGKGGVQ--TLGIRKA
|||.|    |.....  .|  ..   .| ||..|.|||.||||||||.|..  . |||..|.|||||| |..||. |..|. .|| . ||   .. .|..
LKDVEMELELSEEEAEEIYDEIIREYMRRMYQECGLVHGDLSEYNILVHDDGKPWIIDWPQAVEHDHPHALEFLERDCRNIINFFRRKGVDERVMDFREI
Kinase CC1G_04984.AA RIO3 190-431 42 1.6e-71 240.39 In-house 1-254 (254) Show / Hide 
Range on Protein: 190-431
Range on HMM: 1-254/254
Sequence Identity: 42% (110 aa)

RATNEQVLDPRTRLILFKMIGRGLIHEVNGCVSTGKEANVYHAT-------------TPTKDHLALKIYKTSILVFKDRSKYVTGEYRFRRGYSR-NPRK
 .| |. .||.|||...||.  |..  . ||..||||. |.||               ||    |.|..||..  ||.| ||.  ..||.  .|. ||||
HSTAEKAVDPKTRLLMYKMVNSGMLETITGCIATGKESVVFHAYGGSMEDEKEDSKVIPT--ICAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRK

MVRLWAEKEMRNLRRLRAAGIESPEPVEVRENVLVMTFVGDRDGWASPRLKDAELTTDQMIPLYSNLLCLIRTMYHDCKLVHADLSEYNILYHEGRLCII
. |.|||||| || |.. |||  |  | ..  .|||.|.|  |   .|.||.  | ...|   |   | |.| .||.| ||||||||||.|.| |.. .|
IHRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILVMSFIG-HDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLWHAGKVWLI

DVSQSVEHDHPSAFDFLRSDIKNVEEFFGKGGVQ-TLGIRKAFEFVTKEKLSEENEG
|||||||  ||  ..||  | .|| .|| ||||. .|  |. |. |.   .. .|| 
DVSQSVEPTHPHGLEFLFRDCRNVSQFFQKGGVKEALSERELFNAVSGLNITADNEA