Gene CC1G_04234 (C.cinerea)
CC1G_04234
Species: C.cinerea
Alias: CC1G_04234
External Links:
Annotation:
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| CC1G_04234.AA | Protein | None | 981 | None | Fasta, JSON |
| CC1G_04234.NA | RNA | None | 2946 | None | Fasta, JSON |
| CC1G_04234.kin_dom | Protein Kinase Domain | None | 349 | None | Fasta, JSON |
Protein domains of CC1G_04234.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| PI3Kc | CC1G_04234.AA | PI3Kc | 682-949 | 25 | 8.5e-90 | 305.54 | SMART | 1-336 (336) | Show / Hide |
Range on Protein: 682-949
Range on HMM: 1-336/336
Sequence Identity: 25% (87 aa)
SVIVKTGGDLRQEQLAVQLIREFQSIWAEE----KCACWVKHFRILITGSTSGLIETIKDAVSIHSIKKAEYAKRI------------------------
.||.|.| ||||.... |..| .. ||... . .... .... ||. .|.||........|.|.| . ..
AVIFKCGDDLRQDMRMMQMFRLMNKIWQKDKECRRRDLHMRPYKCIPTGPKCGMIEWVPNCETLHQIQKKYHKWKKMPMDYHQWFMFDMLVPEIQKNMYM
-------------------------AEGRLGHV---TLLDHFKANYGDPSSSRFLRAQRNFAQSLAGYSIVTYLLQVKDRHNGNILLD-RDGHLIHIDFG
.|| .. . .|.|.|. ...||. .. |..||..|.|||..|||.|...||||.||.|| .||..|||||
MIWHQQACHWMMMYQHMTHMEWLKYFEGATCPFKPPVLYDWFWEHFPDPN-EDWWEARDNFTRSCAGYCMVTYILGIGDRHNDNIMLDMKTGHCFHIDFG
FILSNTPGNIGF-----EAAPFKFPLEYLEVLG--GIDGAGYKEFKRLFREGFEAARKHCDRIITLVELMQKDSSYPCFAVSADQTANQLRDRFMPT-LT
.|... |...|| |..||.. ....| | |.. ...|... ....|.||| . |..|.|.|..|. ||. . . . ..||.||.. |.
HIFGHGPKKPGFKHHHRERVPFRLTHDMVYVMGGGGKPSGYFGYFRTCCCRAYRAMRKHSNLIMNLFEMMVYDPIMPCWRMM-EKDIKYLRQRFRLDHLS
HSLVGEHVER-----LIASSLGSHWTRLYDSVRVLKIT
.. ..... || .|..|..||.|.. ..
DEEAAQYFMQTMCTKLIEHSNESWTTRMYWMFHNWAQY
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| PI3_PI4_kinase | CC1G_04234.AA | PI3_PI4_kinase | 680-897 | 20 | 4.5e-43 | 154.21 | Pfam | 1-300 (300) | Show / Hide |
Range on Protein: 680-897 Range on HMM: 1-300/300 Sequence Identity: 20% (61 aa) CMSVIVKTGGDLR--QEQLAVQLI-----------------------REFQSIWAEEKCACW----VKHFRILITGSTSGLIETIKDAVSIHSIKKAEYA ...|.| | ||| |... .|.| | . .| ..| . . ..|.. ||. .|.|| .......| | .| WYPFIFKGGDDLRCRQDMRMMQMICVFKPKDEEPYANNPNKWTMWQHRLMNKCWKKDGCDRRRNMQMQPYRCIPTGPWCGMIEWVPNCTTFHEI-PRTYM KRIAEGRLGH---------------------------------VTLLDHFKANYGDPSSSRFLRAQRNFAQSLAGYSIVTYLLQVKDRHNGNILL---DR .... . . . |...|. ...|. ...| .||. |.||...|.|.|.. ||||.||.. . VKCKHKHFNKEHKMWMKMWPDWWHLMRMQKVEVFEMRIMKTPKPGLYQWFWKHNPDA-YEEWWEARDNFVRSCAGMCVVDYILGNGDRHNDNIMVKDDKT DGHLIHIDFGFILS--NTPGNIGFEAAPFKFPL------EYLEVLGG----IDGAGYKEFKRLFREGFEAARKHCDRIITLV-------ELMQKDSSYPC .|||.|||||... .... . .|. ||.. .. ...|| . | .|... . ..| |.| . ...| |.| .| . . TGHLFHIDFGHCFPHWKMKHFHKPERVPFRWTHWPQAKKPMVHAMGGYISLDPSGDYGWFRDYCWHAYRALRRHMNLCMNLLKKAVMRGECMVHDGLPMW FA RS |
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| Kinase | CC1G_04234.AA | ATR | 765-887 | 25 | 1.8e-10 | 31.45 | In-house | 148-267 (267) | Show / Hide |
Range on Protein: 765-887 Range on HMM: 148-267/267 Sequence Identity: 25% (31 aa) DHFKANYGDPSSSRFLRAQRNFAQSLAGYSIVTYLLQVKDRHNGNILLDR-DGHLIHIDFGFILSNTPGNIGFEAAPFKFPLEYLEVLGGIDGAGYKEFK |.| . || . . .. |. | | ...| |.. ||| |||.|. | ..|.|. | | ||. .| . | |. DWFNRRFPDPQQ--WYSSRENYCRSYAVWCMVGYIIGLGDRHTDNILIDKINGECVHVDYNCIFNSGEQFEVPEIVPFRLTHNMVFGMGPMKTYGL--FR RLFREGFEAARKHCDRIITLVELM | . |.| | |. ... RACEVIMMCMRDHRDDIMSVWDCF |
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| Kinase | CC1G_04234.AA | FRAP | 774-824 | 42 | 1e-09 | 31.98 | In-house | 128-179 (251) | Show / Hide |
Range on Protein: 774-824 Range on HMM: 128-179/251 Sequence Identity: 42% (22 aa) PSSSRFLRAQRNFAQSLAGYSIVTYLLQVKDRHNGNILLDRD-GHLIHIDFG |.| . |. ||| |.. |.| ||| ||.|.| | ..||||| PNSEIWFERRTNYTRSLATMSMAGYILGLGDRHPSNIMLQRYTGKIVHIDFG |
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| Kinase | CC1G_04234.AA | PIKK | 774-826 | 35 | 9.8e-09 | 28.31 | In-house | 177-230 (290) | Show / Hide |
Range on Protein: 774-826 Range on HMM: 177-230/290 Sequence Identity: 35% (19 aa) PSSSRFLRAQRNFAQSLAGYSIVTYLLQVKDRHNGNILLDRD-GHLIHIDFGFI |.. .... |.. |.| ..| | | ||| ||..|.. | ..|||||.. PDPEIWWERRENYTRSYAVMCMVGYILGLGDRHPENIMIDMQTGEIVHIDFGCC |
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| Kinase | CC1G_04234.AA | ATM | 786-824 | 45 | 3.3e-05 | 12.15 | In-house | 140-179 (304) | Show / Hide |
Range on Protein: 786-824 Range on HMM: 140-179/304 Sequence Identity: 45% (18 aa) FAQSLAGYSIVTYLLQVKDRHNGNILL-DRDGHLIHIDFG . | | ||| |.| . ||| |||. . |.||| | YTRSVATSSIVGYILGLGDRHVQNILINEQSAELVHIDLG |
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