Gene CC1G_07428 (C.cinerea)

CC1G_07428

Species: C.cinerea
Alias: CC1G_07428
External Links:
Annotation:

Classification

Group: Atypical
Family: Alpha
Subfamily: Alpha-Unclassified

Sequence

Name Sequence Type Origin Length Description Download
CC1G_07428.AA Protein None 640 None Fasta, JSON
CC1G_07428.NA RNA None 1923 None Fasta, JSON
CC1G_07428.kin_dom Protein Kinase Domain None 247 None Fasta, JSON

Protein domain

Protein domains of CC1G_07428.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_07428.AA Alpha_kinase 494-573 30 2.5e-14 50.74 Pfam 151-225 (225) Show / Hide 
Range on Protein: 494-573
Range on HMM: 151-225/225
Sequence Identity: 30% (27 aa)

CDALAHFSFHDSEGSIVFVDIQGFD--SASLPMSSRQGRTAAHALTLFDVMIHSVEKSY------GLGDQGTSGLEDFVS-QHRCNSIC
. |. ||..| |.|  . .|||| .                   . | |  ||.... |      |.|..|  | | |.. ||.|| ||
MQAFSHFTYHRSNGQMMVCDIQGVGYNNK--------------CYYLTDPQIHTKDGNYEMDFDEGMGNLGQEGIEKFFQNQHKCNHIC
Kinase CC1G_07428.AA Alpha 487-573 22 9.8e-13 32.41 In-house 137-215 (215) Show / Hide 
Range on Protein: 487-573
Range on HMM: 137-215/215
Sequence Identity: 22% (21 aa)

ESLVGQTCDALAHFSFHDSEGSIVFVDIQGFDSASLPMSSRQGRTAAHALTLFDVMIHS-----VEKSYGLGDQGTSGLEDFVSQH--RCNSIC
..  .|.. |. |...  |.|. . ||.| .                .   | |. ||.     . . .| |. | .|.  | . |   ||..|
DNEFNQLMQAFSHWTWQYSNGQLMVVDLQ-W--------------GVGEWKLTDPQIHCPAKLDQGMKFGDGNCGYEGMFRFFYTHHVQCNHYC
Kinase CC1G_07428.AA Alpha-Unclassified 491-573 18 3.5e-10 29.23 In-house 139-215 (215) Show / Hide 
Range on Protein: 491-573
Range on HMM: 139-215/215
Sequence Identity: 18% (16 aa)

GQTCDALAHFSFHDSEGSIVFVDIQG-FDSASLPMSSRQGRTAAHALTLFDVMIHSVEKSYG--LGDQGTSGLEDFVSQH--RCNSIC
.| | .  |...  . .. . .| ||  |                 . . |. ||.. . |.   .. |  ..  . . |   || .|
YQYCCTYQHWTYQWTNHCDIVCDLQGWVDEN-----------DKKTWKMTDPQIHTIRQRYQGFKTNCGMRFIDYWFNNHHVQCNHYC
Alpha_kinase CC1G_07428.AA Alpha_kinase 356-573 17 1.1e-07 1.49 SMART 1-255 (255) Show / Hide 
Range on Protein: 356-573
Range on HMM: 1-255/255
Sequence Identity: 17% (47 aa)

E----EEDVKLKVIVEKTPFASGVTKKAHKAYI---------GTEKIAAKYFYDIHDGSSSVLPEENLR-----CLKDELLRLQMLGRSIVK-FLSISKQ
.    . .. .|.  |..||| |   .....            .....|||| ..  ..   . | .       ||.|   ..||. . ... | .. . 
DNKWTCQETCVKI-KEPKPFAKGAMRWCYWGCDWSEHMHCFCHGWECVAKYFKKEYKRTW--DEERYFHETLHLCLRD--VEMQMMCKHWANEFNQEAQ-

ERVSVYNLRVPESYVLRTV-------EGEDHA-----------------WLADPLFEGAEVQKF---SGTSQAGSNSES------LVGQTCDALAHFSFH
  ..  .     .||..         . ...                  ..  |. || | .|.   .|   .  ....       ... | |  |....
HNPCPKKIDFIPCYVFHFPRRIPAEYDRNIPYWFSYRTTDQMMVMCCCIFHMEPFMEG-EFVKYNNNNGWVNDCMRWTTTSQRRTEMFEYCQAFSHWTYE

DSEGSIVFVDIQGFDSASLPMSSRQGRTAAHAL--TLFDVMIHSV---EKSYGLGDQGTSGLEDFVSQHRCNSIC
.|... . .||||               ...    .. |. ||.     ...| |  |  |.| |...|.||.||
WSNHQMLVCDIQGV-------------IHKNGDLYYYTDPQIHTEDQNGYGFGMGNLGQEGIEKFFQTHQCNQIC
Kinase CC1G_07428.AA VWL 543-578 34 2e-06 15.39 In-house 169-206 (206) Show / Hide 
Range on Protein: 543-578
Range on HMM: 169-206/206
Sequence Identity: 34% (13 aa)

IHSVEK--SYGLGDQGTSGLEDFVSQHRCNSICKALGL
||   .   .| |. | .|.  | . | || .|. | |
IHCLDQSHKFGQGNLGYEGMLRFFMTHQCNKYCQKLQL
Kinase CC1G_07428.AA VWL 496-516 42 0.001847 6.28 In-house 138-158 (206) Show / Hide 
Range on Protein: 496-516
Range on HMM: 138-158/206
Sequence Identity: 42% (9 aa)

ALAHFSFHDSEGSIVFVDIQG
|. ||..  |.|    ||.||
AFSHFTWQYSQGYCMIVDLQG