Gene CC1G_11146 (C.cinerea)

CC1G_11146

Species: C.cinerea
Alias: CC1G_11146
External Links:
Annotation:

Classification

Group: Atypical
Family: Alpha
Subfamily: Alpha-Unclassified

Sequence

Name Sequence Type Origin Length Description Download
CC1G_11146.AA Protein None 437 None Fasta, JSON
CC1G_11146.NA RNA None 1314 None Fasta, JSON
CC1G_11146.kin_dom Protein Kinase Domain None 252 None Fasta, JSON

Protein domain

Protein domains of CC1G_11146.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_11146.AA Alpha_kinase 335-405 33 4.6e-11 39.46 Pfam 156-225 (225) Show / Hide 
Range on Protein: 335-405
Range on HMM: 156-225/225
Sequence Identity: 33% (26 aa)

HFVYLHTNRQLIFADLQGTPTSVKLASGEVVEGMMLFDPMTHTINHGS------GIGDFGQEGIDTFVE-QHTCGPLC
|| |  .| |..  |.||  .. |          .| ||  || .         | |..|||||. |.. || | . |
HFTYHRSNGQMMVCDIQGVGYNNK--------CYYLTDPQIHTKDGNYEMDFDEGMGNLGQEGIEKFFQNQHKCNHIC
Kinase CC1G_11146.AA Alpha-Unclassified 326-405 29 1.2e-10 30.78 In-house 138-215 (215) Show / Hide 
Range on Protein: 326-405
Range on HMM: 138-215/215
Sequence Identity: 29% (25 aa)

AYQTVHTFNHFVYLHTNRQLIFADLQG--TPTSVKLASGEVVEGMMLFDPMTHTINHGSG--IGDFGQEGIDTFVEQH--TCGPLC
|||   |. |..|  || ..|  ||||  .    |.        . . ||  |||  . .   ...|  .|| .   |   |   |
AYQYCCTYQHWTYQWTNHCDIVCDLQGWVDENDKKT--------WKMTDPQIHTIRQRYQGFKTNCGMRFIDYWFNNHHVQCNHYC
Kinase CC1G_11146.AA Alpha 321-405 26 1.2e-07 17.63 In-house 135-215 (215) Show / Hide 
Range on Protein: 321-405
Range on HMM: 135-215/215
Sequence Identity: 26% (25 aa)

TRTDLAYQTVHTFNHFVYLHTNRQLIFADLQ-GTPTSVKLASGEVVEGMMLFDPMTHT-----INHGSGIGDFGQEGIDTFVEQH--TCGPLC
|... ..|.  .| |...  .| ||.  ||| |            |. ..| ||  |.     . .  | |..| ||.. |   |  .|   |
TDDNEFNQLMQAFSHWTWQYSNGQLMVVDLQWG------------VGEWKLTDPQIHCPAKLDQGMKFGDGNCGYEGMFRFFYTHHVQCNHYC
Alpha_kinase CC1G_11146.AA Alpha_kinase 183-405 12 9e-06 -22.62 SMART 1-255 (255) Show / Hide 
Range on Protein: 183-405
Range on HMM: 1-255/255
Sequence Identity: 12% (40 aa)

I----QNERMITGFISDVHVAQGSMKVVHE-KD-------AGLRRGSSKSERAKTNWKAVRNLSLARGKAML--ELFYE--------RCEEKGVDAYLYL
.    . | ..   .   . |.| | . .. .|                    ...|. | .. . . |     | ...         .|   .  ..  
DNKWTCQETCVKI-KEPKPFAKGAMRWCYWGCDWSEHMHCF------------CHGWECVAKYFKKEYKRTWDEERYFHETLHLCLRDVEMQMMCKHWAN

SFAKGLLLQEIGKHSPASGQLCDSETDHDGQEVIGIKWLAEERHLSRR------IVRFCGTMQ------HQTTRTDL-----------------------
 | .                                    |.. .  .      |. ..  .       .. ... .                       
EFNQ------------------------------------EAQ-HNPCPKKIDFIPCYVFHFPRRIPAEYDRNIPYWFSYRTTDQMMVMCCCIFHMEPFM

-----------------AYQT------------VHTFNHFVYLHTNRQLIFADLQGTPTSVKLASGEVV---EGM--MLFDPMTHTI---NHGSGIGDFG
                 .. |            ...| |. | ..|.|..  |.||            |   .|.   . ||  ||.     | | | .|
EGEFVKYNNNNGWVNDCMRWTTTSQRRTEMFEYCQAFSHWTYEWSNHQMLVCDIQG------------VIHKNGDLYYYTDPQIHTEDQNGYGFGMGNLG

QEGIDTFVEQHTCGPLC
||||. |...| | . |
QEGIEKFFQTHQCNQIC