Gene CC1G_12594 (C.cinerea)

CC1G_12594

Species: C.cinerea
Alias: CC1G_12594
External Links:
Annotation:

Classification

Group: Atypical
Family: Alpha
Subfamily: Alpha-Unclassified

Sequence

Name Sequence Type Origin Length Description Download
CC1G_12594.AA Protein None 600 None Fasta, JSON
CC1G_12594.NA RNA None 1803 None Fasta, JSON
CC1G_12594.kin_dom Protein Kinase Domain None 246 None Fasta, JSON

Protein domain

Protein domains of CC1G_12594.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_12594.AA Alpha_kinase 494-573 34 7e-13 45.73 Pfam 151-225 (225) Show / Hide 
Range on Protein: 494-573
Range on HMM: 151-225/225
Sequence Identity: 34% (30 aa)

CDAFAHFSLDDSDGSVVFVDIQGIDSSTLPITSGIPLNVAHSVTLFDVMIHSSDGVY------GLGDQGWTGIRDFVT-QHKCNTIC
. || ||.   |.|  . .|||| .     . ...       . | |  ||. || |      |.|..|  ||. |.  ||||| ||
MQAFSHFTYHRSNGQMMVCDIQGVG-----Y-NNK------CYYLTDPQIHTKDGNYEMDFDEGMGNLGQEGIEKFFQNQHKCNHIC
Kinase CC1G_12594.AA Alpha-Unclassified 487-573 20 3.3e-11 32.63 In-house 135-215 (215) Show / Hide 
Range on Protein: 487-573
Range on HMM: 135-215/215
Sequence Identity: 20% (19 aa)

SDLAGRTCDAFAHFSLDDSDGSVVFVDIQG-ID---SSTLPITSGIPLNVAHSVTLFDVMIHSSDGVYG--LGDQGWTGIRDFVTQH--KCNTIC
.. |.  | .. |..   . .. . .| || .|   . |.  |              |. ||. .  |.   .. | ..|  .   |  .|| .|
EYEAYQYCCTYQHWTYQWTNHCDIVCDLQGWVDENDKKTWKMT--------------DPQIHTIRQRYQGFKTNCGMRFIDYWFNNHHVQCNHYC
Kinase CC1G_12594.AA Alpha 540-573 29 8.1e-09 21.07 In-house 175-215 (215) Show / Hide 
Range on Protein: 540-573
Range on HMM: 175-215/215
Sequence Identity: 29% (12 aa)

DVMIHS-----SDGVYGLGDQGWTGIRDFVTQH--KCNTIC
|. ||.      . ..| |. | .|.. |   |  .|| .|
DPQIHCPAKLDQGMKFGDGNCGYEGMFRFFYTHHVQCNHYC
Kinase CC1G_12594.AA VWL 550-578 41 2.3e-07 18.08 In-house 178-206 (206) Show / Hide 
Range on Protein: 550-578
Range on HMM: 178-206/206
Sequence Identity: 41% (12 aa)

YGLGDQGWTGIRDFVTQHKCNTICAKLGL
.| |. |  |.  |   |.|| .|.|| |
FGQGNLGYEGMLRFFMTHQCNKYCQKLQL
Alpha_kinase CC1G_12594.AA Alpha_kinase 351-573 15 3e-06 -16.5 SMART 1-255 (255) Show / Hide 
Range on Protein: 351-573
Range on HMM: 1-255/255
Sequence Identity: 15% (45 aa)

SAVWVEEQEPFKVVVDKESFASGVTKKAVKMYIDK----------KKYAAKYFYDIDGSGAVSHKDNLVHLKDELLRGHILE-------------VAAEK
.  |..     |.  .. .|| |   .. .  .|           ....|||| ..                   .. .  .              ....
DNKWTCQETCVKI-KEPKPFAKGAMRWCYW-GCDWSEHMHCFCHGWECVAKYFKKEYKRTW--------------DEERYFHETLHLCLRDVEMQMMCKH

FVKSARHAKISTYDIRGPAESFI-LTVVEGP---------SKGRA----------------WLVDPLFE-------------NAVMRKFSGTDLAGANSD
...  .  ..  . ....  .|| ..|.. |         ...                  ... |. |             |. ||. . |  .     
WAN--EFNQEAQHNPCPKKIDFIPCYVFHFPRRIPAEYDRNIPYWFSYRTTDQMMVMCCCIFHMEPFMEGEFVKYNNNNGWVNDCMRWTT-T-SQ-R-RT

LAGRTCDAFAHFSLDDSDGSVVFVDIQGI----DSSTLPITSGIPLNVAHSVTLFDVMIHSSD---GVYGLGDQGWTGIRDFVTQHKCNTIC
 ..  | || |... .| .. . .||||     ..  |             ... |. ||. |     .| |  | .||. |. .|.|| ||
EMFEYCQAFSHWTYEWSNHQMLVCDIQGVIHKNGD--L-------------YYYTDPQIHTEDQNGYGFGMGNLGQEGIEKFFQTHQCNQIC
Kinase CC1G_12594.AA Alpha 487-518 27 0.002237 5.3 In-house 137-169 (215) Show / Hide 
Range on Protein: 487-518
Range on HMM: 137-169/215
Sequence Identity: 27% (9 aa)

SDLAGRTCDAFAHFSLDDSDGSVVFVDIQ-GID
.. .. .. || |..   | |. . ||.| |..
DNEFNQLMQAFSHWTWQYSNGQLMVVDLQWGVG
Kinase CC1G_12594.AA VWL 496-516 47 0.082636 1.28 In-house 138-158 (206) Show / Hide 
Range on Protein: 496-516
Range on HMM: 138-158/206
Sequence Identity: 47% (10 aa)

AFAHFSLDDSDGSVVFVDIQG
|| ||.   | |    ||.||
AFSHFTWQYSQGYCMIVDLQG