Gene CC1G_01824 (C.cinerea)

CC1G_01824

Species: C.cinerea
Alias: CC1G_01824
External Links:
Annotation:

Classification

Group: Atypical
Family: ABC1
Subfamily: ABC1-C

Sequence

Name Sequence Type Origin Length Description Download
CC1G_01824.AA Protein None 537 None Fasta, JSON
CC1G_01824.NA RNA None 1614 None Fasta, JSON
CC1G_01824.kin_dom Protein Kinase Domain None 407 None Fasta, JSON

Protein domain

Protein domains of CC1G_01824.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_01824.AA ABC1-C 121-267 44 2.9e-43 132.92 In-house 1-147 (307) Show / Hide 
Range on Protein: 121-267
Range on HMM: 1-147/307
Sequence Identity: 44% (66 aa)

VAIKILHPRVEKTISRDLAIMHFFASCISLLPGMKWLSLPEEVLVFGEMMNQQLDLRHEADNLITFEANFAPRKVPVTFPRPLKIWSSKDILVEEYQNAL
||.|.||| .   .  || .|   .  .  |||.||||||| |  |  .| ||.||| || ||  |  ||   |  | || ||. .  ...||| |  . 
VAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKA-VKFPTPLRPFVTREVLVETYEESV

PLETFLRNGGGPYDY--QIATVGLNAFLTMLLLDNFVHSDLHPGNIMIK
|   .    | | |   .|| .|.|  | |.  ||||| |||||||...
PVSSY-QQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQ
ABC1 CC1G_01824.AA ABC1 51-203 25 2.2e-24 84.27 Pfam 1-126 (126) Show / Hide 
Range on Protein: 51-203
Range on HMM: 1-126/126
Sequence Identity: 25% (41 aa)

AVFQRPFDQVFEEFDQTPIGSGAIAQVYRATLKRDLIPPSYHGPRRTRQVGGALGPIILEDPPPSAPTASVAIKILHPRVEKTISRDLAIMHFFASCISL
. . .| ...|.|||..||... ||||.||.|| |                                   ||.|..|| |.|...||. .|...|  . .
EELGCPWEEIFQEFDEEPIAAASIAQVHRARLKDD--------------------------------GEEVAVKVQHPGVKKRMMRDIYNMRWMAKWVKR

LPGMK---WLSLPEEVLVFGEMMNQQLDLRHEADNLITFEANFAPR--KVPVTFPRPL
..  .   .. | . | .| . . . ||.|.|| |   |  ||.    .  |. |.  
FFPGYRRQRFDLMWIVDEFRKNLPWELDYRREAKNMERFRENFRHWHRQPWVYVPKVY
Kinase CC1G_01824.AA ABC1 120-203 23 4e-12 44.29 In-house 36-123 (123) Show / Hide 
Range on Protein: 120-203
Range on HMM: 36-123/123
Sequence Identity: 23% (21 aa)

SVAIKILHPRVEKTISRDLAIMHFFASCISLLPG---MKWLSLPEEVLVFGEMMNQQLDLRHEADNLITFEANFA--PRKVPVTFPRPL
.|| |..||.| . |. |.  | .. .  .....   .||..|.. | .| . . ...|...|| |.  ....|.   ..  ...||..
TVAVKVQHPGVREQIHYDINNMEMVVKMCDWFFPGPDFKWFFLMWFVDEFQKELPWECDFNNEARNAEKCRQLFKKFHWPF-FYVPRIH
Kinase CC1G_01824.AA ABC1-B 55-83 48 5e-09 29.8 In-house 4-32 (125) Show / Hide 
Range on Protein: 55-83
Range on HMM: 4-32/125
Sequence Identity: 48% (14 aa)

RPFDQVFEEFDQTPIGSGAIAQVYRATLK
.. . ||.||||.||..  .||| || |.
GNIEDVFSEFDQKPIAAASLAQVHRAKLH
Kinase CC1G_01824.AA ABC1 55-83 48 3e-06 21.6 In-house 4-32 (123) Show / Hide 
Range on Protein: 55-83
Range on HMM: 4-32/123
Sequence Identity: 48% (14 aa)

RPFDQVFEEFDQTPIGSGAIAQVYRATLK
.. . ||.|||..|...  |||| || ||
GNWEDVFSEFDEKPFAAASIAQVHRAKLK
Kinase CC1G_01824.AA ABC1-B 120-144 36 0.00728 7.41 In-house 36-60 (125) Show / Hide 
Range on Protein: 120-144
Range on HMM: 36-60/125
Sequence Identity: 36% (9 aa)

SVAIKILHPRVEKTISRDLAIMHFF
.|| |. ||.. | .. |.  | .|
TVAVKVQHPWLRKQFHYDMMMMELF
Kinase CC1G_01824.AA ABC1-C 344-470 34 5.8e-22 65.06 In-house 182-307 (307) Show / Hide 
Range on Protein: 344-470
Range on HMM: 182-307/307
Sequence Identity: 34% (44 aa)

IVFIDAGLVTTLNDTNRTNFLDLFKAVAEFDGYKTGQLMIERSRTPELAVDKETFALKMQHLILSIKRKTFSLGQIKIADLLTDVLKNVRKHRVKMEPDF
.| .|||.|  |      ||   | ||    | .   |..   |  |   | | |   |  |.   .. |  | .. .. ||  | | .  |.||.|  |
LVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQRVAELILHHARASE-CRDVEGFKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVKLESNF

INTVISILLLEGIGRQLDPKMDLFASA
   |  |. |||.|| ||||.|.   |
ASIVFAIMVLEGLGRSLDPKLDILEAA