Gene n820 (Tetrahymena)

n820

Species: Tetrahymena
Alias: n820, 210.m00050, 820
External Links:
Annotation:

Classification

Group: Other
Family: Ciliate-E1

Sequence

Name Sequence Type Origin Length Description Download
n820.AA Protein None 1884 None Fasta, JSON
n820.NA RNA None 5655 None Fasta, JSON
n820.kin_dom Protein Kinase Domain None 47 None Fasta, JSON

Protein domain

Protein domains of n820.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase n820.AA Ciliate-E1 446-594 25 2.1e-13 40.39 In-house 1-163 (202) Show / Hide 
Range on Protein: 446-594
Range on HMM: 1-163/202
Sequence Identity: 25% (43 aa)

INSGGEADIFV-----NIEEQIAFRIIKLDKFDYQNYFLKEQLKELYNIKQFQEEQHVLDLTFSHIIEDKTNNQKYIVHIMQICPTSLNKELT-------
| .|.....|      |...|.|  ||..  .. ||.|..|. ..    | |..|. ....    .|..     . .. |.. |  ||...|.       
IGNGSFSIVFKAKQQNNNYNQVAQKIINCCFNYNQNHFQDEIKEYYKIMK-FKKECYIIQIIDYIKIDQN----YICIIIFECCCCSLKDYLQNHNRLEY

------SVSEYSLSQALNVIFTSLHFLIALRQKYIYHSDIKPGNILK--IGDQYKVSDFGSSQVIHFSQ
         ...  | .. ||  .. ||.|.|. |.|.|||| |||.    ..|. .||| |...  .|
WQQCQQNQNQFTFQQKMQIIFQLIDGLIELHQYNIIHRDIKPQNILINNQ-GNYVYCDFGISKFLKNNQ
Kinase n820.AA Ciliate-B2 441-590 28 4.2e-13 27.06 In-house 2-154 (197) Show / Hide 
Range on Protein: 441-590
Range on HMM: 2-154/197
Sequence Identity: 28% (46 aa)

KLGKYINSGGEADIF----VNI---EEQIAFRIIKLDKFDYQNYFLKEQLKELYNIKQFQEEQHVLDLTFSHIIEDKTNNQKYIVHIMQICPTSLNKELT
 |.||||.||.  |.     ..    . .||.|     |. |.   .|  .|.  .| |. . .|  .  .  |. . .     | ||..|  || .|| 
YLCKYINKGGCGFICEGYKKHSIREYQDLAFKIY----FNKQDCDKEEIQHEIKIMKMFEYNINVVKYIDHIQINETID-----VLIMEKCECSLKQELQ

----SVSEYSLSQALNVIFTSLHFLIALRQKYIYHSDIKPGNILKIG-DQYKVSDFGSSQVI
     . ..     ...||  .  || .| . | | |||| |||.   ..|. .||| | ..
KIQKQQKCFNNQKLYQMIFQLIDGLIQFRMYNILHLDIKPQNILFMQNGNYVYCDFGISSIK
Kinase n820.AA Ciliate-A1 554-594 34 6.5e-10 29.86 In-house 114-155 (301) Show / Hide 
Range on Protein: 554-594
Range on HMM: 114-155/301
Sequence Identity: 34% (15 aa)

LIALRQKYIYHSDIKPGNILKIG--DQYKVSDFGSSQVIHFSQ
....  . | |.|.||.||| |.  |..|. |.| |..  ..|
YADIHDHNILHRDLKPQNIL-IHFDDKWKICDLGMSKQLEQNQ
S_TKc n820.AA S_TKc 440-690 14 2.1e-07 -68.4 SMART 1-231 (231) Show / Hide 
Range on Protein: 440-690
Range on HMM: 1-231/231
Sequence Identity: 14% (41 aa)

LKLGKYINSGGEADIFVNIE----EQIAFRIIKLDKFDYQNYFLKEQLKELYNIKQFQEEQHVLDLTFSHIIEDKTNNQKYIVHIMQICPT---SLNKEL
 .... | .|. .  .  ..    .. |  |||           .  ..|.   |.     ..  |  .          ...  .|  |..   .| . .
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK-----------EHIRREIQILKK--HHPNIVKLYDVFQD-------DHLYMVMEYCDGDLGDLFDYI

TSVSE------YSLSQALNVIFTSLHFLIALRQKYIYHSDIKPGNILKIGDQYKVSDFGSSQVIHFSQPFAQPLACTPYYT-PRRFQNLPFYH---DIYS
 .         ..  .|  ..   .  |  . .. | | |.|| |||    . |..|||.. ..         .  ||.|  |  .   .. .   |..|
KKRGRHGLRFPFPE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE-HIKICDFGLARQL-------TTFCGTPWYMAPEVL---GYGKCKCDWWS

VAKTIEIVLNKINGHQVVKEMLLQQVDKLLKDDENSIKIDCFQLPQEFIDCLIDQCDK-EVD-----EFLQ--------TYL
.  .. . |      .   .|.....                  ..|..| .|..| . . .     | ||         ..
CGCILYEMLCGYPPFP-QMQMMFKKIG-----------------SPEAKD-FIRKCLQKDPEKRPTAEALQDEWDIKCHPWF
Kinase n820.AA MOK 562-596 45 3.8e-07 17.9 In-house 121-155 (283) Show / Hide 
Range on Protein: 562-596
Range on HMM: 121-155/283
Sequence Identity: 45% (16 aa)

IYHSDIKPGNILKIGDQYKVSDFGSSQVIHFSQPF
|.| |.|| |||   |  |..||||   .   ||.
IFHRDVKPENILIKQDHLKLADFGSCRSVYSKQPY
Kinase n820.AA Ciliate-E3 554-587 46 4.5e-07 18.41 In-house 116-153 (202) Show / Hide 
Range on Protein: 554-587
Range on HMM: 116-153/202
Sequence Identity: 46% (18 aa)

LIALRQKYIYHSDIKPGNILKIGDQY-----KVSDFGSS
.||. .| | |||||| ||| ..  .     | .||| |
MIAIHEKNIIHSDIKPDNIL-VDKNNNQLIIKICDFGES
Kinase n820.AA Ciliate-C6 562-594 48 2e-06 18.77 In-house 157-191 (306) Show / Hide 
Range on Protein: 562-594
Range on HMM: 157-191/306
Sequence Identity: 48% (17 aa)

IYHSDIKPGNILKIGD--QYKVSDFGSSQVIHFSQ
| | |||| ||| . |   |. |||| .| .  |.
IAHRDIKPSNILIMDDENNYYLSDFGCAQQLFQSE
Kinase n820.AA ULK 554-606 26 3e-06 18.21 In-house 139-213 (324) Show / Hide 
Range on Protein: 554-606
Range on HMM: 139-213/324
Sequence Identity: 26% (20 aa)

LIALRQKYIYHSDIKPGNILKIGDQ-------------YKVSDFGSSQVIH---FSQPFAQPLA------CTPYY
. .|... | | |||| |||   .|             .|..||| ....    ..|   | .       .||.|
FKELHKHNIIHRDIKPQNILIHNGQPKTDSKKVHPNGVLKIADFGFAKHVDNNNMEQQMCQTCVNEKRIKGTPLY
Kinase n820.AA ULK 554-606 25 4e-06 17.38 In-house 143-217 (329) Show / Hide 
Range on Protein: 554-606
Range on HMM: 143-217/329
Sequence Identity: 25% (19 aa)

LIALRQKYIYHSDIKPGNILKIGDQ-------------YKVSDFGSSQVIHFS---QPFAQPLA------CTPYY
. .|... | | |||| |||   .|             .|..||| ....  .   |  ..         .||.|
FKELHKHNIIHRDIKPQNILIHNGQPKTDSKKVHPNGVLKIADFGFAKHVDNDNMEQQMMMTCVNEKRLCGTPLY
Kinase n820.AA ELM 562-587 42 0.000126 11.58 In-house 168-195 (346) Show / Hide 
Range on Protein: 562-587
Range on HMM: 168-195/346
Sequence Identity: 42% (12 aa)

IYHSDIKPGNILKIGDQ--YKVSDFGSS
. | |||| |.|  ..    |.||||..
CIHRDIKPSNLLISENGKTVKISDFGVC
Kinase n820.AA LKB 562-585 48 0.000211 9.04 In-house 125-149 (265) Show / Hide 
Range on Protein: 562-585
Range on HMM: 125-149/265
Sequence Identity: 48% (12 aa)

IYHSDIKPGNIL-KIGDQYKVSDFG
. | ||||||.|  ..   |..|||
VVHKDIKPGNLLLTHDNTLKICDFG
Kinase n820.AA Pkinase 562-606 30 0.000463 15.44 Pfam 129-177 (293) Show / Hide 
Range on Protein: 562-606
Range on HMM: 129-177/293
Sequence Identity: 30% (16 aa)

IYHSDIKPGNILKIG--DQY----KVSDFGSSQVI-HFSQPFAQPLACTPYY
| | |.|| ||| |   ..     |..|||.. .. . ... .. ...||.|
IIHRDLKPENIL-IDNNGHIDACVKICDFGLAKQFDY-NNS-MTTFCGTPWY
LRR_RI n820.AA LRR_RI 1006-1033 28 0.002292 17.17 SMART 1-28 (28) Show / Hide 
Range on Protein: 1006-1033
Range on HMM: 1-28/28
Sequence Identity: 28% (8 aa)

NIKYLTLDLRQNQIGDAGAQNIVKSLAK
| . ..|.|..| .||.|.. . ..|. 
NCSLRELWLSNNKLGDEGCRQLCEGLKH
LRR_RI n820.AA LRR_RI 1079-1107 20 0.279124 2.45 SMART 1-28 (28) Show / Hide 
Range on Protein: 1079-1107
Range on HMM: 1-28/28
Sequence Identity: 20% (6 aa)

LSSLQTKFYQLGNNIGDQGVQSIAKAIQQ
..||..  .  .|..|| |.. .......
NCSLRE-LWLSNNKLGDEGCRQLCEGLKH
LRR_RI n820.AA LRR_RI 1140-1167 32 0.05168 7.62 SMART 1-28 (28) Show / Hide 
Range on Protein: 1140-1167
Range on HMM: 1-28/28
Sequence Identity: 32% (9 aa)

NLRQLHLDLSSNNIGDETAQVFTKTFKK
| . . |.||.|..||| .... .. | 
NCSLRELWLSNNKLGDEGCRQLCEGLKH
LRR_RI n820.AA LRR_RI 1170-1197 25 0.129678 4.8 SMART 1-28 (28) Show / Hide 
Range on Protein: 1170-1197
Range on HMM: 1-28/28
Sequence Identity: 25% (7 aa)

NITQLSIYLMNNGISNQGAQSISDALKY
| . . ..| ||..   |.. .. .|| 
NCSLRELWLSNNKLGDEGCRQLCEGLKH
LRR_RI n820.AA LRR_RI 1200-1227 21 0.100217 5.59 SMART 1-28 (28) Show / Hide 
Range on Protein: 1200-1227
Range on HMM: 1-28/28
Sequence Identity: 21% (6 aa)

NVTQLNLSLAYNKIDHIGAQKIAKVFEN
| . . |.|..||.   |.. .... . 
NCSLRELWLSNNKLGDEGCRQLCEGLKH
LRR_RI n820.AA LRR_RI 1258-1287 23 0.155163 4.25 SMART 1-28 (28) Show / Hide 
Range on Protein: 1258-1287
Range on HMM: 1-28/28
Sequence Identity: 23% (7 aa)

SQNITRLDLIIGSNYITHEGASIIAETLEK
.... .|.|  ..| .. ||.  ..|.|. 
NCSLRELWL--SNNKLGDEGCRQLCEGLKH
LRR_RI n820.AA LRR_RI 1230-1257 28 0.198821 3.49 SMART 1-28 (28) Show / Hide 
Range on Protein: 1230-1257
Range on HMM: 1-28/28
Sequence Identity: 28% (8 aa)

KISQLCLDLRINKIGNQGIKEIANSLNK
. | . |.|. ||.|  |.......|  
NCSLRELWLSNNKLGDEGCRQLCEGLKH
Kinase n820.AA MOK 1534-1559 34 0.143131 0.11 In-house 1-26 (283) Show / Hide 
Range on Protein: 1534-1559
Range on HMM: 1-26/283
Sequence Identity: 34% (9 aa)

YNEIGKEGAQQISNALQMQYCKNFNF
|  ||| |   .|. ..||  .. |.
YKAIGKIGEGTFSEVMKMQSLRDGNY
LRR_RI n820.AA LRR_RI 1522-1551 30 0.150183 4.35 SMART 1-28 (28) Show / Hide 
Range on Protein: 1522-1551
Range on HMM: 1-28/28
Sequence Identity: 30% (9 aa)

CQDLTQLNLYFHYNEIGKEGAQQISNALQM
 . |  |.|   .| .| ||..|....|. 
NCSLRELWLS--NNKLGDEGCRQLCEGLKH
LRR_RI n820.AA LRR_RI 1583-1610 17 0.089403 5.94 SMART 1-28 (28) Show / Hide 
Range on Protein: 1583-1610
Range on HMM: 1-28/28
Sequence Identity: 17% (5 aa)

NITKLNIDIRSNEISDKGVQSIANSLPK
| . . .....| . |.|.. ....|  
NCSLRELWLSNNKLGDEGCRQLCEGLKH
LRR_RI n820.AA LRR_RI 1613-1640 35 3.1e-05 24.62 SMART 1-28 (28) Show / Hide 
Range on Protein: 1613-1640
Range on HMM: 1-28/28
Sequence Identity: 35% (10 aa)

NITLLNLDLSSNKIGDKGIQSVSTAIQQ
| .|. |.||.||.||.|..  . ....
NCSLRELWLSNNKLGDEGCRQLCEGLKH
LRR_RI n820.AA LRR_RI 1684-1713 36 0.004902 14.84 SMART 1-28 (28) Show / Hide 
Range on Protein: 1684-1713
Range on HMM: 1-28/28
Sequence Identity: 36% (11 aa)

NSNIQQLKLNLSQNKIGDDGIQNISECLIK
|....  .|.||.||.||.|.. ..|.|  
NCSLR--ELWLSNNKLGDEGCRQLCEGLKH
LRR_RI n820.AA LRR_RI 1716-1743 25 0.020798 10.41 SMART 1-28 (28) Show / Hide 
Range on Protein: 1716-1743
Range on HMM: 1-28/28
Sequence Identity: 25% (7 aa)

NITHLCLNLQENQISDCGAQSIANALEK
| . . |.|. | . |.|.. ....|. 
NCSLRELWLSNNKLGDEGCRQLCEGLKH
LRR_RI n820.AA LRR_RI 1746-1772 28 0.142081 4.52 SMART 1-28 (28) Show / Hide 
Range on Protein: 1746-1772
Range on HMM: 1-28/28
Sequence Identity: 28% (8 aa)

NITQLNLDL-GNSITDEGAKIISNALEK
| . . |.| .| ..|||.. ....|. 
NCSLRELWLSNNKLGDEGCRQLCEGLKH
LRR_RI n820.AA LRR_RI 1775-1802 32 2e-06 28.63 SMART 1-28 (28) Show / Hide 
Range on Protein: 1775-1802
Range on HMM: 1-28/28
Sequence Identity: 32% (9 aa)

NVTLLNLNLNENQFGDDGAQSIANALQK
| .|. |.|. | .||.|.. ....|. 
NCSLRELWLSNNKLGDEGCRQLCEGLKH