Gene n615 (Tetrahymena)

n615

Species: Tetrahymena
Alias: 615, n615, 3688.m00145
External Links:
Annotation:

Classification

Group: Other
Family: Ciliate-Unique

Sequence

Name Sequence Type Origin Length Description Download
n615.AA Protein None 526 None Fasta, JSON
n615.NA RNA None 1581 None Fasta, JSON
n615.kin_dom Protein Kinase Domain None 82 None Fasta, JSON

Protein domain

Protein domains of n615.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
S_TKc n615.AA S_TKc 33-338 15 2.1e-05 -97.53 SMART 1-231 (231) Show / Hide 
Range on Protein: 33-338
Range on HMM: 1-231/231
Sequence Identity: 15% (52 aa)

YIVQR------WSKVKEASPRQMNLQEVQSGANQDEVNTQEENSQKQDKKYLMKCYVNLSQQQINLIREDIQVHKKLESQGEFYINKIIDVYQWKDSLAI
| . |       .||. .  .                          .... .|.         . ||  ||..||    .  .| |..||.|  |.| .
YEILRKIGKGAFGKVYKCRHKK------------------------TGRIVAIKIIK-------EHIRREIQILKK----HHPNIVKLYDVFQD-DHLYM

IYEYQNR-IEDLKVEITQNK------------RKIISNVVAAFTFLDKQNDTYHGNICLNNILINKNTLQVKITDFALNRSLYYQNLVNSLNQIFRAPEY
. || .    ||.  | ...            |...  .. |  .. ..    |  .   |||...   ..||.|| | | |    .. ...  ..||| 
VMEYCDGDLGDLFDYIKKRGRHGLRFPFPEHARFYMYQICCALEYCHSH-GIIHRDLKPENILLDE---HIKICDFGLARQL--TTFCGTPW--YMAPEV

EPEVNNLKLQESGIPDKLEMPTVFDDFKKADTWSMGVVLGYLAL-----ADNKDYAEVFLKHIKEKQFKDAQALVLMHGEDYGVFFFRLLEIIPKNRLSV
                         ...|.| || |..|  ..             .. .|.|.                                  | 
L----------------------GYGKCKCDWWSCGCILYEMLCGYPPFP----QMQMMFKKIG----------------------------------SP

AAVNTLLCRNHLN-NMLERAGLSRVSN-------KKII
 | .  . |. |. .  .| .   . .          .
EAKD--FIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase n615.AA Ciliate-E2-Unclassified 62-252 14 0.000152 11.71 In-house 17-260 (352) Show / Hide 
Range on Protein: 62-252
Range on HMM: 17-260/352
Sequence Identity: 14% (39 aa)

EVNTQEENSQK------QDKKYLMKCYVNLSQQQINLIREDIQVHKKLESQG--------------EFYINKIIDVYQWKDSLAIIYEY------QNRIE
..   ... |.       ...  ...... .. .|... . .. .||  .|                 .| | ... | |. . |..||      .. |.
KCQHKKQK-QYYAMKYMKKIQIYKQKQIMNKD-EIMNEMKEMNNKKK-YHQRKYNKIMQQILLNHPHPFIVKMFYCFQDKQNIYIVMEYCEGGDLWQYIK

DLKV----------------EITQNKRK------IISNVVAAFTFLDKQNDTYHGNICLNNILINKNTL--QVKITDFAL----------------NRSL
. |                 ..| .. |      ..  .. .. .| ..|.  | .| ..|||...|    ..||.|| .                ... 
KRKKQKQKGNDLFHNMKQRKIFTEQQAKYKKAKFYFAQILQGLEYLHHKNNIIHRDIKPENILFDNNGKNYYIKIIDFGISKKYQQNNNCDTNQQQKMQI

YYQNLVNSL--NQIFR----APEYEPE-VNNLKLQESGIPDKLEMPTVFDDFKKADTWSMGVVL
..|.. ..   . ..     |||.  .  .. .                   .|.| ||.||.|
WKQQMMWTFCGTPNYMPQYTAPEVLQGQNYDHSKA-----------------YKCDIWSLGVIL
Kinase n615.AA Ciliate-C3 167-189 52 0.000276 11.72 In-house 119-140 (140) Show / Hide 
Range on Protein: 167-189
Range on HMM: 119-140/140
Sequence Identity: 52% (12 aa)

HGNICLNNILINKNTLQVKITDF
|| | . ||||| .  ..|| ||
HGDIKFSNILINSKD-EIKIIDF
Kinase n615.AA Type1 233-252 35 0.000352 6.79 In-house 187-206 (290) Show / Hide 
Range on Protein: 233-252
Range on HMM: 187-206/290
Sequence Identity: 35% (7 aa)

MPTVFDDFKKADTWSMGVVL
....|. .| || .|.| |.
NMNCFESYKMADIYSFGLVM
Kinase n615.AA DDR 167-199 34 0.00049 10.03 In-house 157-190 (306) Show / Hide 
Range on Protein: 167-199
Range on HMM: 157-190/306
Sequence Identity: 34% (12 aa)

HGNICLNNILINKNTLQVKITDFA--LNRSLYYQN
|. .  .|.|. |. . .|| ||   ..|.|| |.
HRDLATRNCLVGKE-YHIKICDFGTVMSRNLYSQD
Kinase n615.AA TSSK 241-252 66 0.000805 8.4 In-house 208-219 (289) Show / Hide 
Range on Protein: 241-252
Range on HMM: 208-219/289
Sequence Identity: 66% (8 aa)

KKADTWSMGVVL
|..|.|||||.|
KWYDVWSMGVIL