Gene n619 (Tetrahymena)

n619

Species: Tetrahymena
Alias: 3688.m00036, n619, 619
External Links:
Annotation:

Classification

Group: Atypical
Family: HisK

Sequence

Name Sequence Type Origin Length Description Download
n619.AA Protein None 1471 None Fasta, JSON
n619.NA RNA None 4416 None Fasta, JSON

Protein domain

Protein domains of n619.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase n619.AA HisK 1033-1174 26 2.2e-24 84.57 In-house 1-164 (164) Show / Hide 
Range on Protein: 1033-1174
Range on HMM: 1-164/164
Sequence Identity: 26% (47 aa)

TDSRRLIQIIITLLSNAHKHTQTG------YLKFRIYPPTKKGNQL---------------------KNIIRFQVEDTGEGMDQSIQQKLNKLLNSG---
.| .|. ||.| |.||| | || |      | |. .     . | .                     ||.|...|.||| ||....|.|. |... .   
SDPNRIKQILINLISNALKFTQKGGIPFQGYIKIKVEQINTQNN-IKYNSIFIQKIQENMVQEQLQQKNLIQISVQDTGCGMPEEQQKKIFKMFGNIDDQ

------IGIGYQDFKQISSFGFNLFICNIIAKKLYNPEYQYTLTKENDPPLESNDASGIKFTSVPHKGSQFYFDIKII
        .  . .   .  |. | |||..||.| . ..|             |.  ||.. | . ||| |.| |   
HQMIKKTFNHQNKKNNQHGCGLGLTICNNLAKGLGPEHNQ-------------NGNRGIQVQSEVGKGSTFSFYIYNN
Kinase n619.AA HATPase_c 1033-1174 20 1.8e-10 38.71 Pfam 1-120 (120) Show / Hide 
Range on Protein: 1033-1174
Range on HMM: 1-120/120
Sequence Identity: 20% (31 aa)

TDSRRLIQIIITLLSNAHKHTQT-GYLKFRIYPPTKKGNQLKNIIRFQVEDTGEGMDQ---SIQQKLNKLLNSGIGIGY-QDFKQISS--FGFNLFICNI
.| .|| |..  |..|| |||.. | .. |. .         . .|..|||.| |..    || .......  .   .   .  ...   .|. | ||. 
GDPDRLHQVVWNLVDNAIKHTPEGGHITVRVHRDD-------DHVRITVEDNGPGIPPEMHSIAEDIPRIFEPFYRTDPDSR-RKYGGGLTGLGLYICRR

IAKKLYNPEYQYTLTKENDPPLESNDASGIKFTSVPHKGSQFYFDIKII
|...     .. |.. |. |                 .|. | | ..  
IVEQ-----HGGTIWVESEP----------------GGGTTFTFTLPLE
Kinase n619.AA HATPase_c 1033-1175 16 3.9e-08 34.27 SMART 1-130 (130) Show / Hide 
Range on Protein: 1033-1175
Range on HMM: 1-130/130
Sequence Identity: 16% (29 aa)

TDSRRLIQIIITLLSNAHKHTQT--------------GYLKFRIYPPTKKGNQLKNIIRFQVEDTGEGMDQ----SIQQKLNKLLNSGIGIG--------
.| .|| |... ||.|| |||..              | .. |..             |..|||.| |...    || .......  .   .        
GDPDRLRQVLWNLLDNAIKHTPEGHADPDLHDGKPGGGRITVRVH-------------RITVEDNGPGIPPEMHKSI-EDIPRIFEPFYRTDDSPSRMCP

YQDFKQISS--FGFNLFICNIIAKKLYNPEYQYTLTKENDPPLESNDASGIKFTSVPHKGSQFYFDIKIIE
...  ...   .|  | ||. |....        .. |                      . |.| ... .
DSRSRKYGGGLTGLGLSICKRIVEQHGGT-----IWVE----------------------TTFTFTLPLER