Gene N24 (M.brevicollis)

N24

Species: M.brevicollis
Alias: N24
External Links:
Annotation:

Classification

Group: PTP
Family: PTP

Sequence

Name Sequence Type Origin Length Description Download
N24.AA Protein None 282 None Fasta, JSON

Protein domain

Protein domains of N24.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Y_phosphatase N24.AA Y_phosphatase 42-270 37 2.2e-88 304.7 Pfam 14-243 (243) Show / Hide 
Range on Protein: 42-270
Range on HMM: 14-243/243
Sequence Identity: 37% (92 aa)

DDTLVHLQ----DEQNSYINANHVTFAEEGRTLWYIAAQGPLPGTVGDFWRMVWEQGSQIVVMVTGEVEGGK-VK-CERYWPTETGEYDALVFGDLKISL
|.| |.||    ||.  |||||....   ..   ||..|||.| |..|||||||.|.....||.. ..|.|. .| |..|||. . | . ...||... .
DHTRVKLQPIPGDEDSDYINANYIDG-PYWNPKAYICTQGPMPHTIEDFWRMVWQQKCTCIVMLCNCMEMGRDEKTCHQYWPD-NKEGQPMTYGDFQVTC

VKSVSSGNYTIRGLRVRNMSE--DLMRTVWHLQYTAWPDHSVPKT-PSSLLDFIDEIREIRVRLMGVAVNNPPW------PTVVHCSAGVGRTGVLMLVE
|.  .  .||.| ..|.|  .  .  |||.|..||.||||.||.. | |.||||...|. .            .      |.|||||||.||||......
VSEEHCPDYTVRTFEVTN-GDQKQETRTVTHYHYTNWPDHGVPESQPKSMLDFIRQVRKWQP-----------NPDHGCPPIVVHCSAGCGRTGTFCAID

SELIRLEQGMRPNPRQTLVELREQRAKVVQTEEQYEFCLRTLLE
  . ..|..  ..  |.. ..|.||.  |||||||.|| ...||
IMCQQMEHEGTVDIFQIVKHMRNQRPGMVQTEEQYIFCYQCILE
PTPc N24.AA PTPc 13-273 30 4.5e-85 289.86 SMART 1-308 (308) Show / Hide 
Range on Protein: 13-273
Range on HMM: 1-308/308
Sequence Identity: 30% (98 aa)

LRQALFSSFVLIS------------RLTFTYACC----------CHIFCVDDDTLVHLQD--------EQNSYINANHVTFAEEGRTLWYIAAQGPLPGT
  .. |..                 . | .   .          |.| |  |.| |.|..        | . |||||.. .   .|.  ||..|||||.|
GFWEEFERLQRMTPWDLMSNYDPCCSCTCACWPENREMDKNRYKCDIPCY-DHTRVKLKPPPGESHCYEGSDYINANYIDGY--WRPKRYICTQGPLPHT

VGDFWRMVWEQGSQIVVMVTGEVEG--------GKVKCERYWPTETGEYDALVFGDLKISLVKSVSSG-NYTIRGLRVRNMSE--------DLMRTVWHL
. |||||||.|...|.|| . ..|.        |..||..||| |      ...|.... ... ..   .||.| ..|.|  .        .  |||.|.
IEDFWRMVWQQKCHIIVMLCNCMEKCTENRDQNGREKCHQYWPDE-----PMTYGHITVTCKSEEKCPDDYTMRTFEVTNTGCNCKYSMACSETRTVTHY

QYTAWPDHSVPKTPSSLLDFIDEIREIRVRLMG-----------VAVNNPPWPTVVHCSAGVGRTGVLMLVESELIRLEQGMRPNPRQTLVELREQRAKV
.||.||||.||..|.|.|||| ..|. . ....           .. . |  |.|||||||.||||.. ...  . ..|.   ... |.. ..|.||.. 
HYTNWPDHGVPESPDSFLDFIRQVRHWQSHSPNMYMNMVSSNSKYHHTCPTGPIVVHCSAGCGRTGTFCAIDIMCQQIEN---VDIFQIVKMMRNQRPGM

VQTEEQYEFCLRTLLEVAR
||||||| || | .||...
VQTEEQYIFCYRCILEYIK
PTPc_motif N24.AA PTPc_motif 161-270 40 2.6e-37 131.22 SMART 1-92 (92) Show / Hide 
Range on Protein: 161-270
Range on HMM: 1-92/92
Sequence Identity: 40% (46 aa)

TVWHLQYTAWPDH-----SVPKTPSSLLDFIDEIREIRVRLMGVAVNNPPWPTVVHCSAGVGRTGVLMLVESELIRLEQGMRPNPRQTLVELREQRAKVV
||.|..||.||||     .||.  .|.|.||...|.               |.|||||||.||||....... . .      ..  ||. |.|.||.  |
TVHHYHYTNWPDHVEKDSGVPE--DSILEFIRHVRK---------------PIVVHCSAGCGRTGTFCAIDMMMQQ------VDIFQTVKEMRKQRPGMV

QTEEQYEFCLRTLLE
|||||| || | .||
QTEEQYIFCYRCILE