Gene 38569 (M.brevicollis)

38569

Species: M.brevicollis
Alias: 38569
External Links:
Annotation:

Classification

Group: TK-assoc
Family: PTP
Subfamily: RPTP

Sequence

Name Sequence Type Origin Length Description Download
38569.AA Protein None 1400 None Fasta, JSON

Protein domain

Protein domains of 38569.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Y_phosphatase 38569.AA Y_phosphatase 504-737 24 8.5e-45 158.71 Pfam 1-243 (243) Show / Hide 
Range on Protein: 504-737
Range on HMM: 1-243/243
Sequence Identity: 24% (60 aa)

NLEKNVRRNTLLPYEYNRVLLANP--GEKDQYYNASFIPT-YSPQMPIIVAEGPQRPTLTLFWQMMWQQEVSLVAMTTTISDGSQ-VV-GERYWPS--EG
|.||| |    ..|...|| |  .  .| . |.||..|.. |  .   |.. ||.  |.  ||.| ||| .. ..| ... .... .   ..|||.  ||
NKEKN-RYKDIPCYDHTRVKLQPIPGDEDSDYINANYIDGPYWNPKAYICTQGPMPHTIEDFWRMVWQQKCTCIVMLCNCMEMGRDEKTCHQYWPDNKEG

DILEIGPLQITLEHEHTNLAICERSLRVKHIDL--GITRDVKLLQMLFWVAGEACED-SHRFLAFAERVRDARSKLKPDQ------PLLVHGITAVGRAG
. ...|..|.|.. |...  .. | ..|.. .   . || |. .... |    . |. .. .| | ..|| ...     .      | .||    .||.|
QPMTYGDFQVTCVSEEHCPDYTVRTFEVTN-GDQKQETRTVTHYHYTNWPDHGVPESQPKSMLDFIRQVRKWQP-----NPDHGCPPIVVHCSAGCGRTG

AFCALLNLLDRFDNERRLNVVDELTRLRQARSHFISDVVYLETILACVLD
.|||.  .... ..|  ... . . ..|. | . .     .. .  |.|.
TFCAIDIMCQQMEHEGTVDIFQIVKHMRNQRPGMVQTEEQYIFCYQCILE
PTPc 38569.AA PTPc 473-740 20 7.6e-43 149.57 SMART 1-308 (308) Show / Hide 
Range on Protein: 473-740
Range on HMM: 1-308/308
Sequence Identity: 20% (65 aa)

TILNLPSRAEAVQTASASVLTY----QYQTAMLPHNL--EKNVRRN-TLLPYEYNRVLLANPG------EKDQYYNASFIPTYSPQMPIIVAEGPQRPTL
 . .  .| .....  .   .|    .  .| .|.|   .|| |     ..|...|| | .|       | . | ||..|..|  .   |.. ||.  |.
GFWEEFERLQRMTPWDLMS-NYDPCCSCTCACWPENREMDKN-RYKCDIPCYDHTRVKLKPPPGESHCYEGSDYINANYIDGYWRPKRYICTQGPLPHTI

TLFWQMMWQQEVSLVAMTTTISDG--------SQVVGERYWPSEGDILEIGPLQITLEHEHTNL-AICERSLRVKHIDL--------GITRDVKLLQMLF
  ||.| ||| .. ..| ... ..         ..  ..|||.|   .. | ...|.. |..    .  | ..|.. .         . || |. ..   
EDFWRMVWQQKCHIIVMLCNCMEKCTENRDQNGREKCHQYWPDE--PMTYGHITVTCKSEEKCPDDYTMRTFEVTNTGCNCKYSMACSETRTVTHYHYTN

WVAGEACEDSHRFLAFAERVRDARSKLKP-----------------DQPLLVHGITAVGRAGAFCALLNLLDRFDNERRLNVVDELTRLRQARSHFISDV
|    . |... ||.| ..||. .| ...                 . | .||    .||.|.|||.  ......|   ... . . ..|. | . .   
WPDHGVPESPDSFLDFIRQVRHWQSHSPNMYMNMVSSNSKYHHTCPTGPIVVHCSAGCGRTGTFCAIDIMCQQIEN---VDIFQIVKMMRNQRPGMVQTE

VYLETILACVLDYAA
  .  .  |.|.|. 
EQYIFCYRCILEYIK
PTPc_motif 38569.AA PTPc_motif 634-737 18 3.4e-07 30.55 SMART 1-92 (92) Show / Hide 
Range on Protein: 634-737
Range on HMM: 1-92/92
Sequence Identity: 18% (20 aa)

DVKLLQMLFWVAG-----EACEDSHRFLAFAERVRDARSKLKPDQPLLVHGITAVGRAGAFCALLNLLDRFDNERRLNVVDELTRLRQARSHFISDVVYL
 |. .... |         . |  . .| | ..||.         |..||    .||.| |||.  ....      ... . . ..|. | . .      
TVHHYHYTNWPDHVEKDSGVPE--DSILEFIRHVRK---------PIVVHCSAGCGRTGTFCAIDMMMQQ------VDIFQTVKEMRKQRPGMVQTEEQY

ETILACVLD
  . .|.|.
IFCYRCILE