Gene 38140 (M.brevicollis)

38140

Species: M.brevicollis
Alias: 38140
External Links:
Annotation:

Classification

Group: TK-assoc
Family: PTP

Sequence

Name Sequence Type Origin Length Description Download
38140.AA Protein None 503 None Fasta, JSON

Protein domain

Protein domains of 38140.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
PTPc 38140.AA PTPc 31-288 31 8.20000000001e-105 355.42 SMART 1-308 (308) Show / Hide 
Range on Protein: 31-288
Range on HMM: 1-308/308
Sequence Identity: 31% (98 aa)

GFVTDFQALASIGVGN---------PSTASKAPENI--VKNRYV-NITAYDASRVVLKDHD--------TDYINASWCPSYTSPRGFIATQGPVPSSFDD
|| . |. | . ....         . | .. |||.   ||||  .| .|| .||.||. .        .|||||.. ..| .|. .|.|||| |. ..|
GFWEEFERLQRMTPWDLMSNYDPCCSCTCACWPENREMDKNRYKCDIPCYDHTRVKLKPPPGESHCYEGSDYINANYIDGYWRPKRYICTQGPLPHTIED

FWWMIWSYKVGEIVMVTRELET--------NVLKCHRYWPEDNAEVQYGKVKVKFTRSAMHA-HHIERHFEVGLASG--------GPTRDVVQLAFQSWP
||.|.| .|.  ||| ... |         .. |||.|||..  ...||. .|....   .. . . |.|||    .        . || | .. . .||
FWRMVWQQKCHIIVMLCNCMEKCTENRDQNGREKCHQYWPDE--PMTYGHITVTCKSEEKCPDDYTMRTFEVTNTGCNCKYSMACSETRTVTHYHYTNWP

DHGVPLTSVEFLEFRAEVLKFHE------------------RDTKAPICIHCSAGVGRTGTYIAIDTALQQVQERAEVNIDAIIGQLRQHRNFMVQTVAQ
||||| ..  ||.|. .| . ..                  ..  .||..|||||.|||||..|||...||...   |.|  |. ..|..|..|||| .|
DHGVPESPDSFLDFIRQVRHWQSHSPNMYMNMVSSNSKYHHTCPTGPIVVHCSAGCGRTGTFCAIDIMCQQIEN---VDIFQIVKMMRNQRPGMVQTEEQ

YAYVHKVVLDALN
| ......|. . 
YIFCYRCILEYIK
Y_phosphatase 38140.AA Y_phosphatase 56-285 37 4.3e-98 336.97 Pfam 1-243 (243) Show / Hide 
Range on Protein: 56-285
Range on HMM: 1-243/243
Sequence Identity: 37% (92 aa)

NIVKNRYVNITAYDASRVVLK----DHDTDYINASWCPS-YTSPRGFIATQGPVPSSFDDFWWMIWSYKVGEIVMVTRELETNV-LK-CHRYWPE--DNA
|  ||||..| .|| .||.|.    | |.|||||.. .. |..|. .|.|||| |....|||.|.| .|.  |||.... | .   | ||.|||.  .. 
NKEKNRYKDIPCYDHTRVKLQPIPGDEDSDYINANYIDGPYWNPKAYICTQGPMPHTIEDFWRMVWQQKCTCIVMLCNCMEMGRDEKTCHQYWPDNKEGQ

EVQYGKVKVKFTRSAMHAHHIERHFEVGLASG--GPTRDVVQLAFQSWPDHGVPLT-SVEFLEFRAEVLKFHERDTKA--PICIHCSAGVGRTGTYIAID
...||. .|. ..  .... . |.|||    .  ..|| | .. . .||||||| . .  .|.|. .| |....      ||..|||||.|||||..|||
PMTYGDFQVTCVSEEHCPDYTVRTFEVTN-GDQKQETRTVTHYHYTNWPDHGVPESQPKSMLDFIRQVRKWQPNPDHGCPPIVVHCSAGCGRTGTFCAID

TALQQVQERAEVNIDAIIGQLRQHRNFMVQTVAQYAYVHKVVLD
...||...  .|.|  |. ..|..|..|||| .|| ......|.
IMCQQMEHEGTVDIFQIVKHMRNQRPGMVQTEEQYIFCYQCILE
PTPc_motif 38140.AA PTPc_motif 183-285 37 9.1e-38 132.71 SMART 1-92 (92) Show / Hide 
Range on Protein: 183-285
Range on HMM: 1-92/92
Sequence Identity: 37% (41 aa)

DVVQLAFQSWPDH-----GVPLTSVEFLEFRAEVLKFHERDTKAPICIHCSAGVGRTGTYIAIDTALQQVQERAEVNIDAIIGQLRQHRNFMVQTVAQYA
 | .. . .||||     |||     .|||...| |        ||..|||||.|||||..|||...||      |.|  .. ..|..|..|||| .|| 
TVHHYHYTNWPDHVEKDSGVPE--DSILEFIRHVRK--------PIVVHCSAGCGRTGTFCAIDMMMQQ------VDIFQTVKEMRKQRPGMVQTEEQYI

YVHKVVLD
......|.
FCYRCILE