Gene 25202 (M.brevicollis)

25202

Species: M.brevicollis
Alias: 25202
External Links:
Annotation:

Classification

Group: TK-assoc
Family: PTP

Sequence

Name Sequence Type Origin Length Description Download
25202.AA Protein None 430 None Fasta, JSON

Protein domain

Protein domains of 25202.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
PTPc 25202.AA PTPc 12-289 36 1.7e-109 370.99 SMART 1-308 (308) Show / Hide 
Range on Protein: 12-289
Range on HMM: 1-308/308
Sequence Identity: 36% (117 aa)

GFGAEFQRLRDMTAAYKAS-----TSREEGTTMHTK--RKNRYK-DIIPYDFNRVVLTTQRSEDEDISGSDYINASSVEHGESQCRFIASQGPLPHTLDD
|| .||.||..||   . |     .| ...   . .  .||||| ||..|| .||.|.   .|... .|||||||. ..  ... |.|. |||||||..|
GFWEEFERLQRMTPWDLMSNYDPCCSCTCACWPENREMDKNRYKCDIPCYDHTRVKLKPPPGESHCYEGSDYINANYIDGYWRPKRYICTQGPLPHTIED

FWRMLWEKDVRIVVMACNIFEN--------DRFKCAKYWPNLHEFDVFDEFEVDNMAEDAIDQDFLVRTLKVTHKG----------ASRIIYQYHYHAWP
|||| |.  ..|.|| ||..|.        .| ||..|||.   . ... ..| .. |.  ..|. .||..||..|           .|....|||..||
FWRMVWQQKCHIIVMLCNCMEKCTENRDQNGREKCHQYWPDE--PMTYGHITVTCKSEEKCPDDYTMRTFEVTNTGCNCKYSMACSETRTVTHYHYTNWP

DHGVPARPGSVMRLIAAFRERQP------------------SDQAAPLVIHCSAGVGRTGHFLLGTICAIDIVWSMLKQMGLDAPCFDIFQVVWFLRQHR
|||||  | |....| ..|..|.                  .....| |.|||||.|||     ||.|||||.. ....       .||||.|  .|..|
DHGVPESPDSFLDFIRQVRHWQSHSPNMYMNMVSSNSKYHHTCPTGPIVVHCSAGCGRT-----GTFCAIDIMCQQIEN-------VDIFQIVKMMRNQR

PAMVQTEDQYVFVYKAILDLVQ
| |||||.||.|.|..||....
PGMVQTEEQYIFCYRCILEYIK
Y_phosphatase 25202.AA Y_phosphatase 41-286 41 2e-100 344.76 Pfam 1-243 (243) Show / Hide 
Range on Protein: 41-286
Range on HMM: 1-243/243
Sequence Identity: 41% (107 aa)

TKRKNRYKDIIPYDFNRVVLTTQRSEDEDISGSDYINASSVEH-GESQCRFIASQGPLPHTLDDFWRMLWEKDVRIVVMACNIFENDR-FK-CAKYWPN-
 |.|||||||..||..||.|.      ..  .||||||. ..  . .. ..|. |||.|||..||||| |.  ....|| ||..|. |  | |..|||. 
NKEKNRYKDIPCYDHTRVKLQPI----PGDEDSDYINANYIDGPYWNPKAYICTQGPMPHTIEDFWRMVWQQKCTCIVMLCNCMEMGRDEKTCHQYWPDN

-LHEFDVFDEFEVDNMAEDAIDQDFLVRTLKVTHKGA----SRIIYQYHYHAWPDHGVPAR-PGSVMRLIAAFRERQPSDQAA--PLVIHCSAGVGRTGH
  ... ... |.| .. |.  ..|. |||..||. |.    .|....|||..|||||||   | |....|  .|. ||. ..   | |.|||||.|||  
KEGQPMTYGDFQVTCVSEEH-CPDYTVRTFEVTN-GDQKQETRTVTHYHYTNWPDHGVPESQPKSMLDFIRQVRKWQPNPDHGCPPIVVHCSAGCGRT--

FLLGTICAIDIVWSMLKQMGLDAPCFDIFQVVWFLRQHRPAMVQTEDQYVFVYKAILD
   || |||||.. .... |      ||||.|  .|..|| |||||.||.|.|..||.
---GTFCAIDIMCQQMEHEGTV----DIFQIVKHMRNQRPGMVQTEEQYIFCYQCILE
PTPc_motif 25202.AA PTPc_motif 175-286 41 8.2e-40 139.51 SMART 1-92 (92) Show / Hide 
Range on Protein: 175-286
Range on HMM: 1-92/92
Sequence Identity: 41% (48 aa)

IIYQYHYHAWPDH-----GVPARPGSVMRLIAAFRERQPSDQAAPLVIHCSAGVGRTGHFLLGTICAIDIVWSMLKQMGLDAPCFDIFQVVWFLRQHRPA
....|||..||||     |||    |....|...|.        |.|.|||||.|||     ||.||||.....          .||||.|. .|..|| 
TVHHYHYTNWPDHVEKDSGVPE--DSILEFIRHVRK--------PIVVHCSAGCGRT-----GTFCAIDMMMQQ----------VDIFQTVKEMRKQRPG

MVQTEDQYVFVYKAILD
|||||.||.|.|..||.
MVQTEEQYIFCYRCILE