Gene 32006 (M.brevicollis)

32006

Species: M.brevicollis
Alias: 32006
External Links:
Annotation:

Classification

Group: TK-assoc
Family: PTB
Subfamily: SHC-like

Sequence

Name Sequence Type Origin Length Description Download
32006.AA Protein None 427 None Fasta, JSON

Protein domain

Protein domains of 32006.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
PID 32006.AA PID 52-194 22 6.1e-17 61.26 Pfam 1-145 (153) Show / Hide 
Range on Protein: 52-194
Range on HMM: 1-145/153
Sequence Identity: 22% (35 aa)

YPVRYVGSIQVVQSLRSLSTPEKTAICREAINRTGEAAKLIKVKRKAPPRAKEFLADTP--FLKVLDLKINISAKGIVTTSIPK---REILANDPIAKIS
. |||.|...| .. |....   ...|.|.|.|  ....          . . . ...     .  .  ..|| .|.  . .     .|.....|. .||
FEVRYLGCVEVPCHMRRPDKNTRMMQCQECIHRVCMQVP---------AKKINKIRGHRGHWQHWQKIDLHISTDGVKWIDEKTEAEQECMHDHPMRNIS

FAAGGVDKS----YFWFTYVAKDRRDN-RYCHVFDGGA--LADDILATLGQVFSL
|.|.| |.     || .  ...|.... ..||||      .| ||  |.|| |..
FCADGGDPHVDMRYFAY-DICRDGPCQRFACHVFWCCKTQQAQDIAQTVGQAFQV
PTB 32006.AA PTB 47-205 16 6.1e-08 33.63 SMART 1-156 (156) Show / Hide 
Range on Protein: 47-205
Range on HMM: 1-156/156
Sequence Identity: 16% (30 aa)

GIFYSYPVRYVGSIQVVQSLRSLSTPEKTAICREAINRTGEAAKLIKVKRKAPPRAKEFLADTPFLKVLDLKINISAKGIVTTSIPKREILANDPIAKIS
.   .. |.|.|...| .. .|.. .  .. |.|....                            .  .  ..|| .|.  ..    ..... || .||
PWGCCFNVWYLGCVEVPHHRNSMAPGKGMQVCQECMRKIR----------------------QHWKHWQKMHLHISVDGVKLIDPQTKQVIHHHPIHRIS

FAAGGV------------DKSYFWFTYVAKDRRD--------NRYCHVFDGGALA-DDILATLGQVFSLLATNNLPVKSA
|.| .             |...  | |....  |         . ||||     . .|| .|.||.|.. .   .  ...
FCAHDPYRWNTGGHHCCDDDRC--FGYICRHPNDRGSHRMTYWFRCHVFWCEDPHAEDIAQTIGQAFQVCYQQCQKQRCQ