Gene 33699 (M.brevicollis)

33699

Species: M.brevicollis
Alias: 33699
External Links:
Annotation:

Classification

Group: TK-assoc
Family: PTB
Subfamily: PTB-MiaB

Sequence

Name Sequence Type Origin Length Description Download
33699.AA Protein None 1020 None Fasta, JSON

Protein domain

Protein domains of 33699.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
UPF0004 33699.AA UPF0004 118-220 42 9e-41 135.2 Pfam 1-104 (104) Show / Hide 
Range on Protein: 118-220
Range on HMM: 1-104/104
Sequence Identity: 42% (46 aa)

KVHIEAYGCQMNVSDAEIAWSILKNAGCVRCDTAEEADVTLLVTCAIRENAENKIWSRLNQLKAHKRRLGRT--RNFQIGVLGCMAERLK-HKLLEQEK-
||.|. .|||||. | || ..||| || ...| .||||| .. ||..|||||.|..... .||. ||   .    . .|.| ||||.|..  .|.. .  
KVYIITFGCQMNQYDSEIMAGILKKAGYEIVDDPEEADVIIINTCTVRENAEQKSRQTIRRLKRLKR---KNEGPDKKIIVTGCMAQRYPVEELFKEPPV

AIDLVAG
 .||| |
HVDLVFG
Elp3 33699.AA Elp3 264-507 23 2.1e-57 197.92 SMART 1-246 (246) Show / Hide 
Range on Protein: 264-507
Range on HMM: 1-246/246
Sequence Identity: 23% (67 aa)

PAAFVSIQRGCANN----------CSYCIVPFTRGRERSRQIETIVEEVAHL----SRQGVKEV----TLLGQNVNSYRDLTGIDDVRNEPVVSMAKGFG
| |.. ..||| ..          |.||.        ||| .| ||.|...|     ..|.||.    ...||....|   |.                 
PYAYYIHTRGCPHRKGTKDCGHGGCTYCD--------RSRYPEAIVREIEMLFIMHKEKGYKEIWFPPRFYGQIFFGYGTPTM-----------------

TIYKPRRGGRGFGELLRAVAEVDP----TMRIRFTSPH-PKDFPDDVLEAIATTPNI-------CKQIHIPAQSGSTRMLELMRRNHTREAYLDLVQHMR
              ||... |. .      ...... . | .| ....||..  .         |. .||. ||.. |.|..|.|.||.| ||......|
--------------LLEMIREIFGEAFDDDVEITIECRYPDMFDEEQIEAMKEYGVNCWIEWQKCPRVHIGVQSFDDRVLKRMNRGHTYEDYLEAIEKAR

QVI-PGVALSSDFIAGFCGETEADHEDTRSL---------IEMVDYDMAFLFAYSMRAKTHAYHRMQDD-VPEDVKKRRLEEIRD
..  | . ...||| || ||||.| |.|  .         .. .. |. ....|| |  | .| ..... ... .|. |.|....
EAGLPFINVCTDFIVGFPGETEEDFEETLDFMFWRCREIRLKELGPDHIHIYPYSPRPGTPMYNMWKRGEYKPPDKEERAEMYEE
Radical_SAM 33699.AA Radical_SAM 268-464 23 1.1e-28 102.6 Pfam 1-157 (157) Show / Hide 
Range on Protein: 268-464
Range on HMM: 1-157/157
Sequence Identity: 23% (48 aa)

VSIQRGCANNCSYCIVPFTRGRERSRQIETIVEEVAHLS-RQGVKEVTLLGQNVNSYRDLTGIDDVRNEPVVSMAKGFGTIYKPRRGGRGFGELLRAVAE
....||| ..| || .|   |. |.. .| ||||| .|. |.||. |.. | . . |                               . |.|.......
IIHTRGCNHRC-YCYFP---GK-REMTPEEIVEEVKELKHRWGVR-VIFTGGEPTLY-------------------------------PDFVEIVERICK

VDPTMRIRFTSPHPK-DFPDDVLEAIATTPNICKQIHIPAQSGSTR-MLELMRRNHTREAYLDLVQHMRQV-IPGVALSSDFIAGFCGETEADHEDTRSL
    ..|.......  | ....||...  .  .. .||. |... .  ...|.|.|| | .|. ....|.. ||.  ...|.| |. ||.. | |.|  .
R--GIHIHIETNGTLLD-DEEWLEELKEAG--VDRVHISLQTFDDEMYHKIMNRKHTWEDVLEAIEKAREAGIPV--IVTDNIVGMPGENDEDFEETIEF

I
.
L
TRAM 33699.AA TRAM 518-590 27 2.4e-09 36.33 Pfam 1-66 (66) Show / Hide 
Range on Protein: 518-590
Range on HMM: 1-66/66
Sequence Identity: 27% (20 aa)

QRRIGSLQLVLVEKRSRRNQDEWSGRTDGNIRAVFTDAEVPDVQGLLRRANVGEYVVVQIEGATAMTLRGRPL
.| .|. | ||||........|. ||||..   .| .. .      .    .||.|.|.|. ..  .|.|. .
RRYVGQTQEVLVEGEGKWHNGEGIGRTDNGKVVFFPGD-L-----CRNPW-IGEFVKVKITKVKRNYLFGEVV
PTB 33699.AA PTB 647-812 16 7.6e-15 56.57 SMART 1-156 (156) Show / Hide 
Range on Protein: 647-812
Range on HMM: 1-156/156
Sequence Identity: 16% (30 aa)

GFFYSYPVEFLGSVEIPKSMNEVALGSRTQIVRYLMNRLMVETKRLKKAGKPPKGFDEFVNGPITSAEVPVSFGIAADGMVVVLNTPNQRPDEQPPLLFY
.   .. |..||.||.|...|  | |...| .. .|...                       . . . ... . |  ||. .. . ..        ..  
PWGCCFNVWYLGCVEVPHHRNSMAPGKGMQVCQECMRKIR----------------------QHWKHWQKMHLHISVDGVKLIDPQTK-------QVIHH

HAMRMISIATGGD----------QDTYELVSYVAKDASG--------KRSCFIFNCGDDA-DDVLTTLGQSFLLAQELALKKRER
|... || .  ..           |.  ...|.... ..        ...|..| | |.. .|.  |.|| | .. ....|.|. 
HPIHRISFCAHDPYRWNTGGHHCCDDDRCFGYICRHPNDRGSHRMTYWFRCHVFWCEDPHAEDIAQTIGQAFQVCYQQCQKQRCQ
PID 33699.AA PID 747-809 28 1.5e-07 28.31 Pfam 85-153 (153) Show / Hide 
Range on Protein: 747-809
Range on HMM: 85-153/153
Sequence Identity: 28% (20 aa)

HAMRMIS-IATGGDQD-TYELVSY--VAKDASGKRSCFIFNCGD--DADDVLTTLGQSFLLAQELALKK
|.|| || .| ||| . .   ..|  ......... | .| | .   | |. .|.|| | .. .. |..
HPMRNISFCADGGDPHVDMRYFAYDICRDGPCQRFACHVFWCCKTQQAQDIAQTVGQAFQVCYQQCLRA
PID 33699.AA PID 652-679 28 0.120176 7.57 Pfam 1-28 (153) Show / Hide 
Range on Protein: 652-679
Range on HMM: 1-28/153
Sequence Identity: 28% (8 aa)

YPVEFLGSVEIPKSMNEVALGSRTQIVR
. | .||.|| |..|      .|.....
FEVRYLGCVEVPCHMRRPDKNTRMMQCQ