Gene 11698 (M.brevicollis)

11698

Species: M.brevicollis
Alias: 11698
External Links:
Annotation:

Classification

Group: TK-assoc
Family: SH2
Subfamily: Unique

Sequence

Name Sequence Type Origin Length Description Download
11698.AA Protein None 751 None Fasta, JSON

Protein domain

Protein domains of 11698.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
PDZ 11698.AA PDZ 55-127 20 1.1e-07 32.84 SMART 1-80 (80) Show / Hide 
Range on Protein: 55-127
Range on HMM: 1-80/80
Sequence Identity: 20% (17 aa)

QPYGLILATSSSSHGLFVAGAKSHSPASRAPR-----LEPGQRIITVNGEKALRWSRDVFRAKIQHQN-------ELHLELVLDL
...|. ..      |.|... .  .||..| |     | || ||. |||.. ..  ..   ...  |        ...|... . 
GGLGFSIVG-----GIFISSVVPGGPAEKAGRNTRGHLRPGDRILEVNGQQPVENMTHEQAVDMLKQCGGGGIGDKVTLTVQRPG
SH2 11698.AA SH2 634-682 40 2.1e-14 44.11 Pfam 1-52 (81) Show / Hide 
Range on Protein: 634-682
Range on HMM: 1-52/81
Sequence Identity: 40% (21 aa)

WLHGTISRREAEQRLVAAGIQDGLFLLRESQTQQSAWALSLVIGN---QIIH
| || ||| |||..| . | .|| ||.|||....   .||.. ..   .. |
WYHGKISRQEAERLLMNPGNPDGTFLVRESESTPGDYTLSVRDDGPGDRVKH
SH2 11698.AA SH2 632-732 30 4.8e-08 33.97 SMART 1-87 (87) Show / Hide 
Range on Protein: 632-732
Range on HMM: 1-87/87
Sequence Identity: 30% (31 aa)

AMWLHGTISRREAEQRLVAAGIQDGLFLLRESQTQQSAWALSLVIGNQIIHHLLRKGSDHERPEPDTPFTIDGTPLPLGVNNLPVTSLEEIVLLFRQGTH
  | || ||| |||| | . | .|| ||.|.|...  . .||.  .... | ..|.  |         . ||.|      .. .  || |.|  ...   
QPWYHGNISREEAEQLLKNPGMPDGDFLVRDSESNPGDYVLSVRWKGKVKHYRIRRNDD-------GKYYIDET------WRRKFPSL-ELVNHYQHNPL

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