Gene 9543 (M.brevicollis)

9543

Species: M.brevicollis
Alias: 9543
External Links:
Annotation:

Classification

Group: TK-assoc
Family: SH2
Subfamily: Unique

Sequence

Name Sequence Type Origin Length Description Download
9543.AA Protein None 1284 None Fasta, JSON

Protein domain

Protein domains of 9543.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Sam7 9543.AA sam7 51-112 22 2.1e-12 41.96 In-house 1-70 (70) Show / Hide 
Range on Protein: 51-112
Range on HMM: 1-70/70
Sequence Identity: 22% (16 aa)

WPTSRVVDWLAMNGF---DDFVDSFQMFHL-----NGDHLQNMKVNDFNRVGSQPMARRKQLVKAVARLV
|... |..||   |.   ....|.|. ..      .||||..|. .|. . |      || . ... .. 
WTFEDVCEWLEWIGMENFQQYCDNFRDHGIDDWVTDGDHLCHMTEEDLMEMGITRPGHRKKIWNHIQQMR
SAM 9543.AA SAM 48-114 26 4.3e-08 34.13 SMART 1-67 (67) Show / Hide 
Range on Protein: 48-114
Range on HMM: 1-67/67
Sequence Identity: 26% (18 aa)

LGQWPTSRVVDWLAMNGFDDFVDSFQMFHLNGDHLQNMK-VNDFNRVGSQPMARRKQLVKAVARLVKQ
   |. . | |||   |... .| |.  .. |.|| ..   .| ...| ..   || . ||.  . .|
VD-WTPEDVCDWLESIGMCQYKDNFRKNGIDGMHLLQLTSHEDLKEMGITNPGHRKKILKAIQKMKDQ
SAM_2 9543.AA SAM_2 48-112 23 4e-07 27.3 Pfam 1-71 (71) Show / Hide 
Range on Protein: 48-112
Range on HMM: 1-71/71
Sequence Identity: 23% (17 aa)

LGQWPTSRVVDWLAMNGF-DDFVDSFQMFHLNG-DHL-QNMKVNDF--N-RVGSQPMARRKQLVKAVARLV
  .| ...| .||   |.  ...|.|  ... | .|| ..|. .|     | | .   .||.. ... |. 
VHYWTFEDVCEWLRSIGMCCQYKDNFRQHGITGFEHLYAHMTHDDLAMKNRMGITNVGHRKKIWNKIQRMK
SAM_1 9543.AA SAM_1 49-112 22 9.7e-05 19.78 Pfam 1-66 (66) Show / Hide 
Range on Protein: 49-112
Range on HMM: 1-66/66
Sequence Identity: 22% (15 aa)

GQWPTSRVVDWLAMNGFDDFVDSFQMFHL-NGDHLQNMKVNDFNR-VGSQPMARRKQLVKAVARLV
..|. . | .||   |.   .|.|.. .. ..|.|..|. .|. . .| . .  || ..... .| 
DYWHFEDVCEWLESIGMQQYIDHFMRAGYIDMDCLLQMTWEDLMKHMGVTLPGHRKKIMYSIQMLK
SH2 9543.AA SH2 1174-1218 31 9.7e-05 15.74 Pfam 1-51 (81) Show / Hide 
Range on Protein: 1174-1218
Range on HMM: 1-51/81
Sequence Identity: 31% (16 aa)

WYRPHFDRTATEDMLQR-EVQTGRFVVRSSRNSQ--LTLSVLVDH---EVR
|| ..  |   |..|.  . . | |.|| |....   ||||. |    .|.
WYHGKISRQEAERLLMNPGNPDGTFLVRESESTPGDYTLSVRDDGPGDRVK