Gene 34162 (M.brevicollis)

34162

Species: M.brevicollis
Alias: 34162
External Links:
Annotation:

Classification

Group: TK-assoc
Family: SH2
Subfamily: Supt6h

Sequence

Name Sequence Type Origin Length Description Download
34162.AA Protein None 1839 None Fasta, JSON

Protein domain

Protein domains of 34162.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
SH2 34162.AA SH2 1480-1576 17 9.6e-05 16.29 SMART 1-87 (87) Show / Hide 
Range on Protein: 1480-1576
Range on HMM: 1-87/87
Sequence Identity: 17% (17 aa)

HPAFI-NADYSQAMKQLQN--GHIGDVVFRPSSKGENLITCSWKTGDKQVAHTTIKEDEARKRDEYSLSDRLLLEVAPGRTEEFEDLDQIIAQYISPMAD
.| .  | . ..| . |.|  .. || . |.|..  . .. |.... ..| |  |....    . |.. .           . |..| .... |  .   
QPWYHGNISREEAEQLLKNPGMPDGDFLVRDSESNPGDYVLSVRWK-GKVKHYRIRRNDD---GKYYIDET--------WRRKFPSL-ELVNHYQHNPLG