Gene 28702 (M.brevicollis)

28702

Species: M.brevicollis
Alias: 28702
External Links:
Annotation:

Classification

Group: TK-assoc
Family: SH2
Subfamily: SH2-R

Sequence

Name Sequence Type Origin Length Description Download
28702.AA Protein None 268 None Fasta, JSON

Protein domain

Protein domains of 28702.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
SH2 28702.AA SH2 143-231 30 2e-06 20.42 Pfam 1-81 (81) Show / Hide 
Range on Protein: 143-231
Range on HMM: 1-81/81
Sequence Identity: 30% (27 aa)

WLHHATRRKEAEDLLREEALRAQESGIFLVRAKKEDQGQYALDVAWLDESSGQAVVGHHLIARSSNGTFELDEQAYEHCPSLESLIEYM
| |    |.|||.||..   . .. | ||||     .|.|.| | . ..   . .| |  | |  ||.. . .  .  ..||  |.|. 
WYHGKISRQEAERLLMN---PGNPDGTFLVRESESTPGDYTLSVRDDGP---GDRVKHYRIQRTDNGGYYITGRHK--FCSLQELVEHY
SH2 28702.AA SH2 141-237 31 5e-06 27.14 SMART 1-87 (87) Show / Hide 
Range on Protein: 141-237
Range on HMM: 1-87/87
Sequence Identity: 31% (31 aa)

QPWLHHATRRKEAEDLLREEALRAQESGIFLVRAKKEDQGQYALDVAWLDESSGQAVVGHHLIARSSNGTFELDEQAYEHCPSLESLIEYMMKSNNK
||| |    |.|||.||. .    .. | ||||    . |.|.| | |         | | .| |. .| . .||.  . .|||  |... ..    
QPWYHGNISREEAEQLLKNP---GMPDGDFLVRDSESNPGDYVLSVRWK------GKVKHYRIRRNDDGKYYIDETWRRKFPSL-ELVNHYQHNPLG