Gene F57C7.1b (Nematode worm)
F57C7.1b
Species: Nematode worm
Alias: F57C7.1b, aSWK465
External Links:
Annotation:
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| F57C7.1b.AA | Protein | None | 1087 | None | Fasta, JSON |
Protein domains of F57C7.1b.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.
| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| BROMO | F57C7.1b.AA | BROMO | 280-390 | 26 | 2.6e-32 | 114.57 | SMART | 1-118 (118) | Show / Hide |
Range on Protein: 280-390 Range on HMM: 1-118/118 Sequence Identity: 26% (32 aa) PTRHTNCLDFVLFTVVKDALKH--------KHSWPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYWCAEDAIKDLNTLFDNCKKFNDRNDDIY . . . . ..| .|.. .| ...|||. |||...|..|.|..|. .|||| ||.|.|.| .|. .|. ..|.. .|.||...| .. ..| DPK-QKKCQELLKEVMCHKHDHGDPMNRGRPYAWPFMQPVDRKELNYPDYYDIIKNPMDLKTIKKKLENHQYQSMEEFVDDFMLMFNNCMTYNEPDSEVY IMCENIEGVVQRGLEWMPS | . .. .... .. .| KMAKKLQKFFEEKWREFPP |
|||||||||
| Bromodomain | F57C7.1b.AA | Bromodomain | 291-376 | 28 | 2.1e-24 | 81.88 | Pfam | 1-89 (89) | Show / Hide |
Range on Protein: 291-376 Range on HMM: 1-89/89 Sequence Identity: 28% (25 aa) LFTVVK--DALKHKHSWPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYW-CAEDAIKDLNTLFDNCKKFNDRNDDIYIMCEN . .... . ..|. ..||. ||| .. |.|.|..|...|||| ||...|.| .| .. ..|.. .. ||...|.....|| ... CDQIMDMKYIMEHPICEPFWHPVDPDRDEYPDYYDIIKHPMDLSTIQQKLKNNKYRNNIAEFWHDMELMWHNCMTYNGPDSPIYKDARK |
|||||||||
| BROMO | F57C7.1b.AA | BROMO | 553-662 | 42 | 1.8e-44 | 154.94 | SMART | 1-118 (118) | Show / Hide |
Range on Protein: 553-662 Range on HMM: 1-118/118 Sequence Identity: 42% (50 aa) IPEWQKFCSKLLNEIHSVKNKG---------FAQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAEPEEFVHDINLMVDNCCKYNPKGSPAH .|. ||.|..||.|... |.. .| .|. |||...|.. || ..|.|||||.||||||. || .||||.|..||..||..||...|. . DPK-QKKCQELLKEVMCHKHDHGDPMNRGRPYAWPFMQPVDRKELNYPDYYDIIKNPMDLKTIKKKLENHQYQSMEEFVDDFMLMFNNCMTYNEPDSEVY SNALELRSFFEQRWKLFPR . | .|..|||..|. ||. KMAKKLQKFFEEKWREFPP |
|||||||||
| Bromodomain | F57C7.1b.AA | Bromodomain | 560-648 | 34 | 5.2e-28 | 93.72 | Pfam | 1-89 (89) | Show / Hide |
Range on Protein: 560-648 Range on HMM: 1-89/89 Sequence Identity: 34% (31 aa) CSKLLNEIHSVKNKGFAQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYA-EPEEFVHDINLMVDNCCKYNPKGSPAHSNALE |..... . ........ | ||||.. .. || ..|..||||.||..||. ..| ..|| ||..|| || .||...|| . | . CDQIMD-MKYIMEHPICEPFWHPVDPDRDEYPDYYDIIKHPMDLSTIQQKLKNNKYRNNIAEFWHDMELMWHNCMTYNGPDSPIYKDARK |
|||||||||