Gene TAF1 (Sea Urchin)

TAF1

Species: Sea Urchin
Alias: Spk055, SPU_012482, TAF1
External Links: Sea Urchin Project Link
Annotation:

Classification

Group: Atypical
Family: TAF1

Sequence

Name Sequence Type Origin Length Description Download
TAF1.AA Protein None 951 None Fasta, JSON

Protein domain

Protein domains of TAF1.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
DUF3591 TAF1.AA DUF3591 1-145 45 4.5e-75 260.51 Pfam 279-437 (494) Show / Hide 
Range on Protein: 1-145
Range on HMM: 279-437/494
Sequence Identity: 45% (72 aa)

MEDIKKAF-PTHSESSIRKRLKLCADFKRTG-LD-SNWWVMKPDFRLPSE-EEIRAMVSPELCCAYYSMQGAEQRLKDAGYGEKSFFAP-----DNDDDD
..||.|.| | ..|...|.||| .....|.|  | ..||..|....||.| ||||.|..|| ||.|.||| ..|.|.||||.....|..     ..|||.
IHDITKHFFPDQNEMQNRQRLKEFMKYQRDGGMDNQGWWKLKEGETLPDEFEEIRKMITPEDCCLYESMQVGQQHLEDAGYNNTDEFKRDYQQIQEDDDE

D----NAKIDDEVKTAPWNTTRAFIAAMKGKCLLAVTGVADPTGCGEGFSYIKV-PNKP
.     .|||.|...|||||||.|| |..||..|.. |..||||||||||.|.. ..|.
ETKKVQMKIDLEQMMAPWNTTRNFINATQGKAMLQLHGEGDPTGCGEGFSFIRTKSMKG
BROMO TAF1.AA BROMO 600-708 25 6.1e-30 106.7 SMART 1-118 (118) Show / Hide 
Range on Protein: 600-708
Range on HMM: 1-118/118
Sequence Identity: 25% (30 aa)

RADPQVIMSGILEEILNAIREL--------PYTQPFHTAVEKRK--FPDYYKIVSKPIALQTIRDNVRKHRYASRDSFEADINQIVDNSILYNGEMSPLT
. . |  .. .|.|.......         ||. ||.  |....  .||||.|. .|. |.||. ....|.| |...|..|......|   ||.. |.  
DPK-QKKCQELLKEVMCHKHDHGDPMNRGRPYAWPFMQPVDRKELNYPDYYDIIKNPMDLKTIKKKLENHQYQSMEEFVDDFMLMFNNCMTYNEPDSEVY

MVAKNMLLMAQKKMQEKTE
. || .    ..|..|  .
KMAKKLQKFFEEKWREFPP
Bromodomain TAF1.AA Bromodomain 611-694 29 3.9e-24 81.03 Pfam 1-89 (89) Show / Hide 
Range on Protein: 611-694
Range on HMM: 1-89/89
Sequence Identity: 29% (26 aa)

LEEILN--AIRELPYTQPFHTAV--EKRKFPDYYKIVSKPIALQTIRDNVRKHRYA-SRDSFEADINQIVDNSILYNGEMSPLTMVAKN
...|..   | | | ..||.  |  .....||||.|...|. |.||. ... . |  . . |..|....  |.. |||. ||. . |. 
CDQIMDMKYIMEHPICEPFWHPVDPDRDEYPDYYDIIKHPMDLSTIQQKLKNNKYRNNIAEFWHDMELMWHNCMTYNGPDSPIYKDARK
BROMO TAF1.AA BROMO 722-830 29 7.1e-32 113.13 SMART 1-118 (118) Show / Hide 
Range on Protein: 722-830
Range on HMM: 1-118/118
Sequence Identity: 29% (35 aa)

GDDDQLAFSFILDNILTALKLV--------PESWPFHNPVNPKK--VRDYYKIIKYPMDLESIRKNIVKHYYHSSEEFLKHVERIRDNCIQYNGKESQLT
  . |  ....|. .. ...          | .|||..||..|.  . |||.||| ||||. |.|.. .|.|.| |||.. .... .|| .||...|.  
DPK-QKKCQELLKEVMCHKHDHGDPMNRGRPYAWPFMQPVDRKELNYPDYYDIIKNPMDLKTIKKKLENHQYQSMEEFVDDFMLMFNNCMTYNEPDSEVY

SVSEKVLETCKSKLLENEE
. ..|  .....|. | ..
KMAKKLQKFFEEKWREFPP
Bromodomain TAF1.AA Bromodomain 733-816 32 2e-29 98.38 Pfam 1-89 (89) Show / Hide 
Range on Protein: 733-816
Range on HMM: 1-89/89
Sequence Identity: 32% (29 aa)

LDNILT--ALKLVPESWPFHNPV--NPKKVRDYYKIIKYPMDLESIRKNIVKHYYH-SSEEFLKHVERIRDNCIQYNGKESQLTSVSEK
.|.|..   ..  |...||. ||  ..... |||.|||.||||. |....  ..|. . .||....|... ||. |||..|..   ..|
CDQIMDMKYIMEHPICEPFWHPVDPDRDEYPDYYDIIKHPMDLSTIQQKLKNNKYRNNIAEFWHDMELMWHNCMTYNGPDSPIYKDARK