Gene 3710 (Tetrahymena)

3710

Species: Tetrahymena
Alias: TTHERM_00656160, 96.m00179, 3710, PreTt03710, 987
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Other
Family: Ciliate-E2
Subfamily: Ciliate-E2-Unclassified

Sequence

Name Sequence Type Origin Length Description Download
3710.AA Protein None 385 None Fasta, JSON
3710.kin_dom Protein Kinase Domain None 63 None Fasta, JSON
3710.NA RNA None 1158 None Fasta, JSON

Protein domain

Protein domains of 3710.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase 3710.AA CAMK 1-63 22 1.9e-23 71.78 In-house 324-425 (425) Show / Hide 
Range on Protein: 1-63
Range on HMM: 324-425/425
Sequence Identity: 22% (23 aa)

MFALISGELPFYDMK-------------------SIQEGKFAFDAAS------------WKIVSKD--------ARELIEKMLVVNTEKRITLPEAMNHS
.... .|..|||. .                    |..||. |.               |. .|..        .. || |||.|. |||.|. ...|| 
LYIMLCGYPPFYGDCDNEICEDEWIGMNDYELFEKIMKGKYDFPPPYFSPISCNYGPEWWDDISDEFHHFVSQECKDLIRKMLQVDPEKRMTIEQCLNHP

WF
|.
WM
Kinase 3710.AA CDPK 14-63 36 3.8e-21 61.79 In-house 222-271 (271) Show / Hide 
Range on Protein: 14-63
Range on HMM: 222-271/271
Sequence Identity: 36% (18 aa)

MKSIQEGKFAFDAASWKIVSKDARELIEKMLVVNTEKRITLPEAMNHSWF
|.....||. |.   |...|..|. ||.|||... .||..  .|..| ||
MEKVKKGKYSFEGPEWDHISDEAKDLIRKMLCYDPKKRMSAQQALQHPWF
Kinase 3710.AA Ciliate-E2a 1-63 31 1.2e-20 57.56 In-house 206-275 (275) Show / Hide 
Range on Protein: 1-63
Range on HMM: 206-275/275
Sequence Identity: 31% (22 aa)

MFALISGELPFYD------MKSIQEGKFAFDAAS-WKIVSKDARELIEKMLVVNTEKRITLPEAMNHSWF
.. |..|..||.        ... . |. |.    |. .||..  |. |||... .||||  .| || ||
FYILLCGKPPFKGKTYNEILQQNKKCKIDFNCPECWEKCSKECKDLMKKMLEKDPKKRITAQQALNHPWF
Kinase 3710.AA Ciliate-E2 1-63 29 1.4e-20 67.31 In-house 286-365 (365) Show / Hide 
Range on Protein: 1-63
Range on HMM: 286-365/365
Sequence Identity: 29% (24 aa)

MFALISGELPFYDMKSIQEGKFAFDAA--------------SWKIVSKDARELIEK----MLVVNTEKRIT-LPEAMNHSWF
.. ...|..||  .. |...|. |. .              ||| .|...  || |    ||... |||||   ...|| ||
LYEMLFGKPPF--QQQIKQCKIDFPCPEWQKDTQCIQCKWKSWKKWSQECKDLIKKFGKRMLQKDPEKRITGWEQILNHPWF
Kinase 3710.AA RAD53 15-63 42 3.3e-20 56.42 In-house 256-305 (305) Show / Hide 
Range on Protein: 15-63
Range on HMM: 256-305/305
Sequence Identity: 42% (21 aa)

KSIQE-GKFAFDAASWKIVSKDARELIEKMLVVNTEKRITLPEAMNHSWF
..|   ||..|.  .|. .|  |. || .||.|. |||.|  ||.||.|.
EQIKNQGKYHFPHPYWDRISEEAKDLIKWMLCVDPEKRYTIDEALNHPWM
Kinase 3710.AA Ciliate-E2-Unclassified 1-63 24 2.1e-18 60.44 In-house 260-352 (352) Show / Hide 
Range on Protein: 1-63
Range on HMM: 260-352/352
Sequence Identity: 24% (23 aa)

MFALISGELPFY----------------------DMKSIQEGKFAFDAASW----KIVSKDARELIE----KMLVVNTEKRITLPEAMNHSWF
..... |..|||                        . |..... |. ..|    |..|. | ..|.    |||..| .||||.....|| ||
LYEMLFGYYPFYDNNCEQHQQLITQWINNAYRKQLYQNIKQKNIQFPKFPWQQIPKHWSPEAKDFINDLLQKMLKKNPNKRITFEQILNHPWF
Kinase 3710.AA CAMKL 1-63 35 3.3e-18 54.57 In-house 226-297 (297) Show / Hide 
Range on Protein: 1-63
Range on HMM: 226-297/297
Sequence Identity: 35% (26 aa)

MFALISGELPFYD-----------MKSIQEGKFAFDAASWKIVSKDARELIEKMLVVNTEKRITLPEAMNHSWF
..|.. |.||| |            .  .. .  .    |. || |.| || |||.|| |||.|. . ||| |.
LYAMVCGYLPFDDDTYNKQGKDNIYLYWKIMCG-YYPPIWYHVS-DCRDLIRKMLQVNPEKRPTIHQIMNHPWM
Kinase 3710.AA CASK 2-63 35 9.1e-17 50.63 In-house 264-330 (330) Show / Hide 
Range on Protein: 2-63
Range on HMM: 264-330/330
Sequence Identity: 35% (24 aa)

FALISGELPFYDMKS-----IQEGKFAFDAASWKIVSKDARELIEKMLVVNTEKRITLPEAMNHSWF
| | || |||.  |.     |  |.  .|.  |. .|  |..|. .||  .  .||.  ||.|| | 
FILLSGCLPFFGTKDRLFEMIMKGRYDMDPRYWPHISESAKDLVRRMLMADPHHRISIYEALNHPWI
Kinase 3710.AA DCAMKL 15-63 40 1.9e-16 47.13 In-house 231-279 (279) Show / Hide 
Range on Protein: 15-63
Range on HMM: 231-279/279
Sequence Identity: 40% (20 aa)

KSIQEGKFAFDAASWKIVSKDARELIEKMLVVNTEKRITLPEAMNHSWF
. |..||| |.. .|. .|  |..|| .||.|. ||| |  . | |.| 
DQIMQGKFEFPMPYWDNISDSAKDLISHMLQVDPEKRYTAEQIMQHPWV
Kinase 3710.AA RSK 1-63 32 1.6e-14 49.85 In-house 202-278 (278) Show / Hide 
Range on Protein: 1-63
Range on HMM: 202-278/278
Sequence Identity: 32% (25 aa)

MFALISGELPFYD---------MKSIQEGKFAFDAASWKIVSKDARELIEKMLVVNTEKRIT-----LPEAMNHSWF
|. . .| .||.          || ||.||| ..   |. .|..|..|| ||| .. .||..     . |  .|.||
MYEMLTGCPPFQGPNDNNRKEIMKRIQKGKFSLTMPNWQYLSQEAKDLIRKMLHRDPHKRLGCGPQDAEEIKQHPWF
Kinase 3710.AA Pkinase 1-63 17 7.7e-11 39.41 Pfam 202-293 (293) Show / Hide 
Range on Protein: 1-63
Range on HMM: 202-293/293
Sequence Identity: 17% (16 aa)

MFALISGELPFYDM------------KSIQEGKFAFDAASWKIVS-----------------KDARELIEKMLVVNTEKRITLPEAMNHSWF
.. ...|..||..             . | .... ||   |  .|                 ......|...| .. .||.| .....| ||
LYEMLCGRPPFPGHCWHDNHDQMQMICRIMGPPLHFDWPWWCSISYFFFRHWHFHWTFHNWSEECKDFIKWCLCKDPKKRPTAEQILQHPWF
Efhand 3710.AA efhand 118-146 34 5e-06 26.52 Pfam 1-29 (29) Show / Hide 
Range on Protein: 118-146
Range on HMM: 1-29/29
Sequence Identity: 34% (10 aa)

TPKDIFALIDKNGNGFITVQDIKEVVKRL
  |..|...||.|.|.|.... .|..|.|
ELKEMFKEFDKDGDGYIDFEEFCEMMKKL
EFh 3710.AA EFh 118-146 34 6e-06 26.94 SMART 1-29 (29) Show / Hide 
Range on Protein: 118-146
Range on HMM: 1-29/29
Sequence Identity: 34% (10 aa)

TPKDIFALIDKNGNGFITVQDIKEVVKRL
  |..|...||.|.|.|. .. |...|.|
EFKEMFRMFDKDGDGYIDFEEFKDMMKSL
EFh 3710.AA EFh 217-245 13 0.040223 7.75 SMART 1-29 (29) Show / Hide 
Range on Protein: 217-245
Range on HMM: 1-29/29
Sequence Identity: 13% (4 aa)

KLQKAFKYMDASETNSISKDDIMDVFARE
.....|. .|.     |.... .|.... 
EFKEMFRMFDKDGDGYIDFEEFKDMMKSL
Efhand 3710.AA efhand 217-245 17 0.152762 10.06 Pfam 1-29 (29) Show / Hide 
Range on Protein: 217-245
Range on HMM: 1-29/29
Sequence Identity: 17% (5 aa)

KLQKAFKYMDASETNSISKDDIMDVFARE
.|...|| .|.     |.... ...... 
ELKEMFKEFDKDGDGYIDFEEFCEMMKKL
Efhand 3710.AA efhand 266-283 38 30.091354 1.66 Pfam 12-29 (29) Show / Hide 
Range on Protein: 266-283
Range on HMM: 12-29/29
Sequence Identity: 38% (7 aa)

DKKGNLNFEGFCDVMRMG
|. | ..|| ||..|.. 
DGDGYIDFEEFCEMMKKL