Gene 8908 (Tetrahymena)

8908

Species: Tetrahymena
Alias: 557.m00004, TTHERM_01683250, PreTt08908, 8908, 1108
External Links: Tetrahymena Genome Database (TGD) ,
Annotation:

Classification

Group: Other
Family: Ciliate-C8
Subfamily: C8

Sequence

Name Sequence Type Origin Length Description Download
8908.AA Protein None 152 None Fasta, JSON
8908.kin_dom Protein Kinase Domain None 69 None Fasta, JSON
8908.NA RNA None 459 None Fasta, JSON

Protein domain

Protein domains of 8908.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase 8908.AA C8 42-150 55 3.3e-48 165.38 In-house 1-109 (226) Show / Hide 
Range on Protein: 42-150
Range on HMM: 1-109/226
Sequence Identity: 55% (61 aa)

FKNFEYLSSGAYALLLKAQNSQQNRQVALKFIGSSNQEDKNGIESLKKEYEMLQKFSQSEFLVNVYDCFYLMEEKEDEDADGNDIIVQTEVKSFFVMEME
|.||.|||.|||.. |||.|...||...|||  ..|..|...|||..|||||.|.|.|..|.||.|||||.|.|...|. ..|..|||||.||.||||||
FNNFQYLSFGAYGMVLKAKNVKDNREIVLKFQKCQNKQDIQNIESIMKEYEMPQVFQQYDFYVNEYDCFYEMYEVFEEEKCSNEKIVQTEEKSCFVMEME

LCEIVWKRL
|||   | |
LCEQNLKQL
Kinase 8908.AA Ciliate-C8 51-144 59 8.7e-46 158.43 In-house 1-97 (238) Show / Hide 
Range on Protein: 51-144
Range on HMM: 1-97/238
Sequence Identity: 59% (58 aa)

GAYALLLKAQNSQQNRQVALKFIGSSNQEDKNGIESLKKEYEMLQKFSQSEFLVNVYDCFYLMEEKEDEDADGNDIIVQTEVK---SFFVMEMELCE
||... |||||..|||.|||||. ..|...||..|...|||||...|.|..|.|.||||||||||...|| ||||.||||..|   ||||||||.|.
GAFGMVLKAQNKKQNRKVALKFRECVNKIQKNQMEHEIKEYEMIMQFCQMPFVVQVYDCFYLMEENKKEDDDGNDKIVQTQEKIKKSFFVMEMEKCQ
Kinase 8908.AA C2 51-144 37 1.1e-26 88.23 In-house 1-102 (245) Show / Hide 
Range on Protein: 51-144
Range on HMM: 1-102/245
Sequence Identity: 37% (39 aa)

GAYALLLKAQNSQQNRQVALKFIGSSNQEDKNGIESLKKEYEMLQKFSQSEFLVNVYDCFYLMEE-KEDEDADGNDIIVQTEV--------KSFFVMEME
|| .| ||| | .|||.|||| |   .. | || ... |||....... . ....||..||| .. ||||| | ...... |         |.|.|.|.|
GAFGLVLKAFNKKQNRHVALK-IQECQSNDINGMHEVQKEYGIMRQCQNMPYIIKVYNYFYLTVNKKEDEDEDNDEEEKEQENIKKQKNEKKIFVVYEQE

LCE
 |.
FCQ
Kinase 8908.AA STE20 42-115 16 2.2e-08 27.04 In-house 1-82 (288) Show / Hide 
Range on Protein: 42-115
Range on HMM: 1-82/288
Sequence Identity: 16% (14 aa)

FKNFEYLSSGAYALLLKAQNSQQNRQ----VALKFIGSSNQEDK-NGIESLKKEYEMLQKFSQSEFLVNVYDCFYLM----EE
....| . .|.|    || . . ...    || | .  ...... . .|...||. .....  ..  |. |.... .    .|
YELLEKIGQGSYGKVYKAYHKPTGEYCNQRVAIKKMNLEKCDNEQDEWEDIQKEISIMKQCK-HPNIVKYYGSYLKDDTCDDE
Kinase 8908.AA Ciliate-E1 48-112 22 4.9e-08 22.74 In-house 1-66 (202) Show / Hide 
Range on Protein: 48-112
Range on HMM: 1-66/202
Sequence Identity: 22% (15 aa)

LSSGAYALLLKA-QNSQQNRQVALKFIGSSNQEDKNGIESLKKEYE-MLQKFSQSEFLVNVYDCFYL
...| ... .|| |......|||.|.|    ....| .....|||  ... | . . .....|....
IGNGSFSIVFKAKQQNNNYNQVAQKIINCCFNYNQNHFQDEIKEYYKIMK-FKKECYIIQIIDYIKI
Kinase 8908.AA STE 42-119 16 2e-06 18.98 In-house 1-111 (359) Show / Hide 
Range on Protein: 42-119
Range on HMM: 1-111/359
Sequence Identity: 16% (18 aa)

FKNFEYLSSGAYALLLKAQNS------QQNRQ---------VALKFIGSSNQE----------DKNG----IESLKKEYEMLQKFSQ-SEFLVNVYDCFY
... | . .||.    || |       . ...         .| | .  .|..          ..|     .....|| ....|... ... |. |.|..
WEGIEKIGKGAFGTVYKAMNHKNCNIHKTGEVENNGETGEIMAIKQMNLENCNNKDENQENQELENKNHEEMQQILKEIKIMKKCNHMHPNIVKYYGCYF

LM---EEKEDE
     .. .||
KEGHNHKNDDE
Kinase 8908.AA Ciliate-E2 42-116 14 4e-06 16.91 In-house 1-107 (365) Show / Hide 
Range on Protein: 42-116
Range on HMM: 1-107/365
Sequence Identity: 14% (16 aa)

FKNFEYLSSGAYALLLKAQNSQQNRQVALKFIGSSN------------------QEDKNGIESLKKEYEMLQ---------------KFSQSEFLVNVYD
.|  . . .|...   |... ....|.|.|.|   .                  .  ||.||..|.|  ...               .. .. .... |.
YKFIKKIGQGNFGSVYKCKVWKVQKQFAIKIID-QKQQRQQMQEKVKIKIYAMKIMKKNQIEQIKQEIHIMREINCFYKKINEKNILEQLNHPNIIKMYE

CFYLMEEK
||. . ..
CFQEKDDN
Kinase 8908.AA CMGC 42-111 16 5e-06 14.7 In-house 1-108 (513) Show / Hide 
Range on Protein: 42-111
Range on HMM: 1-108/513
Sequence Identity: 16% (18 aa)

FKNFEYLSSGAYALLLKAQN--------------SQQNRQVALKFI--GSSNQED------KNGIE-SLKKEYEMLQKFS---------------QSEF-
... ... .|.|.   |...               . |..||.| |     ..|.      |.|.  .   | ..|....               . .  
YEIIKKIGEGTYGVVYKCRDKRTNQKKDNGQAHHHETNEIVAIKKIKNPF-YEEQAKSTIEKDGFPIRALREIKILKHLNKNHDPNWQRRDDPDNKHHNN

LVNVYDCFY
.|. ||.||
IVKLYDIFY
Kinase 8908.AA ULK 42-111 21 1.6e-05 15.62 In-house 1-85 (324) Show / Hide 
Range on Protein: 42-111
Range on HMM: 1-85/324
Sequence Identity: 21% (18 aa)

FKNFEYLSSGAYA-LLLKAQNSQQ---NRQVALKFIGSSNQEDKNG-------IESLKKEYEMLQKFS--QSEF--LVNVYDCFY
.   . | .|...    |. | ..   | .|| | |  ... .|.        ...||.| . ..|.   ....   |  ||.|.
YCLNHCLGKGSFGVKVYKGRNKKTNTQNQYVACKMIDKKKMNKKKNEQEGQYMWQLLKNEIQIMKKLKELKHPNHHIVKLYDWFE
Kinase 8908.AA CDK 42-111 24 9.1e-05 11.0 In-house 1-77 (284) Show / Hide 
Range on Protein: 42-111
Range on HMM: 1-77/284
Sequence Identity: 24% (19 aa)

FKNFEYLSSGAYALLLKAQNSQQN-----RQVALKFIGSSN---QEDKNGIE-SLKKEYEMLQKFSQSEFLVNVYDCFY
..  | .  |.|.   ||.. |..     . |||| |   |   .|.| |.  .   |  .|..    .  |...|...
YEKLEKIGEGTYGVVYKARDKQTGRKKTGQIVALKKIRMENEGREEEKEGFPITAIREISLLKEL--HPNIVKLHDVCH