Gene 27698 (Tetrahymena)

27698

Species: Tetrahymena
Alias: TTHERM_01483640, 1114, 415.m00011, PreTt27698, 27698
External Links: Tetrahymena Genome Database (TGD) ,
Annotation:

Classification

Group: Other
Family: Ciliate-C8
Subfamily: C8

Sequence

Name Sequence Type Origin Length Description Download
27698.AA Protein None 178 None Fasta, JSON
27698.kin_dom Protein Kinase Domain None 68 None Fasta, JSON
27698.NA RNA None 537 None Fasta, JSON

Protein domain

Protein domains of 27698.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase 27698.AA C2 48-147 45 3.1e-51 173.27 In-house 1-102 (245) Show / Hide 
Range on Protein: 48-147
Range on HMM: 1-102/245
Sequence Identity: 45% (46 aa)

GSFAIVLKALNKITGQTVALKVVECDESDFKAMEVIQNEYKMLEVFSGCKYIIKVFNSFYLTESNDSDEDEDDDQIPVGQNN--NQSNLIRVFYVMEQEL
|.|..|||| || ....||||..||...|.. |. .|.||.... .....|||||.|.||||.....|||||.|.....|.|  .|.|. ..|.|.||| 
GAFGLVLKAFNKKQNRHVALKIQECQSNDINGMHEVQKEYGIMRQCQNMPYIIKVYNYFYLTVNKKEDEDEDNDEEEKEQENIKKQKNEKKIFVVYEQEF

CQ
||
CQ
Kinase 27698.AA Ciliate-C8 48-150 35 8e-32 111.37 In-house 1-100 (238) Show / Hide 
Range on Protein: 48-150
Range on HMM: 1-100/238
Sequence Identity: 35% (38 aa)

GSFAIVLKALNKITGQTVALKVVEC-DESDFKAMEVIQNEYKMLEVFSGCKYIIKVFNSFYLTESNDSDEDEDDDQIPVGQNN--NQSNLIRVFYVMEQE
|.|..|||| || ....||||..|| .. . . || .. ||.|.  |. ......|...|||.| |....|...|.|...|..  .      .|.|||.|
GAFGMVLKAQNKKQNRKVALKFRECVNKIQKNQMEHEIKEYEMIMQFCQMPFVVQVYDCFYLMEENKKEDDDGNDKIVQTQEKIKK------SFFVMEME

LCQNDC
.||. |
KCQQNC
Kinase 27698.AA CMGC 39-107 16 5.2e-14 41.51 In-house 1-108 (513) Show / Hide 
Range on Protein: 39-107
Range on HMM: 1-108/513
Sequence Identity: 16% (18 aa)

YQILQFAGNGSFAIVLKALNKITG--------------QTVALKVVECDESDFKAME----------VIQNEYKMLEVFS----------------GCKY
|.|..  | |....| |. .| |.              . ||.| .  .. .   .            .. | |.|. ..                  ..
YEIIKKIGEGTYGVVYKCRDKRTNQKKDNGQAHHHETNEIVAIKKIKNPF-YEEQAKSTIEKDGFPIRALREIKILKHLNKNHDPNWQRRDDPDNKHHNN

IIKVFNSFY
|.| ...||
IVKLYDIFY
Kinase 27698.AA STE20 39-107 29 7e-13 43.69 In-house 1-74 (288) Show / Hide 
Range on Protein: 39-107
Range on HMM: 1-74/288
Sequence Identity: 29% (22 aa)

YQILQFAGNGSFAIVLKALNKITGQT----VALKVVECDESDF--KAMEVIQNEYKMLEVFSGCKYIIKVFNSFY
|..|.  |.||.  | || .| ||.     || |... .. |   . .| ||.|. ..  .  ...|.| ..|..
YELLEKIGQGSYGKVYKAYHKPTGEYCNQRVAIKKMNLEKCDNEQDEWEDIQKEISIMKQCK-HPNIVKYYGSYL
Kinase 27698.AA STE 39-107 17 2.2e-11 36.61 In-house 1-100 (359) Show / Hide 
Range on Protein: 39-107
Range on HMM: 1-100/359
Sequence Identity: 17% (17 aa)

YQILQFAGNGSFAIVLKALNKI---------------TGQTVALKVVECDESDF---------------KAMEVIQNEYKMLEVFSG-CKYIIKVFNSFY
...... |.|.|  | ||.|.                ||. .| |... ....                . |. |..| |..  ..  ...|.| . ...
WEGIEKIGKGAFGTVYKAMNHKNCNIHKTGEVENNGETGEIMAIKQMNLENCNNKDENQENQELENKNHEEMQQILKEIKIMKKCNHMHPNIVKYYGCYF
Kinase 27698.AA CDK 39-70 40 9.4e-11 30.46 In-house 1-37 (284) Show / Hide 
Range on Protein: 39-70
Range on HMM: 1-37/284
Sequence Identity: 40% (15 aa)

YQILQFAGNGSFAIVLKALNKITG-----QTVALKVV
|..|.  | |....| || .|.||     | |||| .
YEKLEKIGEGTYGVVYKARDKQTGRKKTGQIVALKKI
Kinase 27698.AA C8 36-148 26 1.2e-10 33.32 In-house 1-104 (226) Show / Hide 
Range on Protein: 36-148
Range on HMM: 1-104/226
Sequence Identity: 26% (30 aa)

QKHYQILQFAGNGSFAIVLKALNKITGQTVALKVVEC-DESDFKAMEVIQNEYKMLEVFSGCKYIIKVFNSFYLTESNDSDEDEDDDQIPVGQNNNQSNL
 . .|.| |   |....|||| |    ....||. .| ...| . .| |. ||.|..||.  . .. . . ||. ...   |... ..| . ..      
FNNFQYLSF---GAYGMVLKAKNVKDNREIVLKFQKCQNKQDIQNIESIMKEYEMPQVFQQYDFYVNEYDCFYEMYEVFEEEKCSNEKIVQTEE------

IRVFYVMEQELCQN
 . . ||| |||..
-KSCFVMEMELCEQ
Kinase 27698.AA CDK7 39-68 46 4.2e-10 22.66 In-house 1-30 (288) Show / Hide 
Range on Protein: 39-68
Range on HMM: 1-30/288
Sequence Identity: 46% (14 aa)

YQILQFAGNGSFAIVLKALNKITGQTVALK
|..... | | || | ||. . ||| || |
YEKIKHIGEGQFATVYKACDHQTGQIVAIK
Kinase 27698.AA MST 39-81 34 1.1e-09 26.84 In-house 1-42 (254) Show / Hide 
Range on Protein: 39-81
Range on HMM: 1-42/254
Sequence Identity: 34% (15 aa)

YQILQFAGNGSFAIVLKALNKITGQTVALKVVECDESDFKAME
. |.   | ||.  | ||..| ||. || |.|   ..|. ...
FDIVEKLGQGSYGSVYKAIHKQTGKIVAIKMVPV-NEDLQEII
Kinase 27698.AA MARK 39-86 36 2.9e-09 26.63 In-house 1-49 (262) Show / Hide 
Range on Protein: 39-86
Range on HMM: 1-49/262
Sequence Identity: 36% (18 aa)

YQILQFAGNGSFAIVLKALNKITGQTVALKVVE-CDESDFKAMEVIQNE
| .|.  | ||.| | .|..| ||. ||.|..|  . .|...|. .. |
YKMLKTIGHGSYAKVKLACHKHTGRKVAIKIYEKFKLNDPQWMKNVMRE
Kinase 27698.AA Pkinase 39-107 23 1.3e-08 31.54 Pfam 1-70 (293) Show / Hide 
Range on Protein: 39-107
Range on HMM: 1-70/293
Sequence Identity: 23% (17 aa)

YQILQFAGNGSFAIVLKALNKITGQTVALKVVECDESDFKAMEVIQN--EYKMLEVFSGCKYIIKVFNSFY
|.|..  | |||. | |. .| ||..||.|... .. . .  .   .  | ...  . ....|.. . .|.
YHIGRKIGSGSFGCVYKCHHKGTGKIVAVKIIKKRHEKSWKDQTHRRLSEIQIMKRL-NHPNIVRLYDWFE