Gene 16382 (Tetrahymena)

16382

Species: Tetrahymena
Alias: 3836.m02050, 1089, PreTt16382, TTHERM_00085340, 16382, 6.m00456
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Other
Family: Ciliate-A4

Sequence

Name Sequence Type Origin Length Description Download
16382.AA Protein None 2673 None Fasta, JSON
16382.kin_dom Protein Kinase Domain None 112 None Fasta, JSON
16382.NA RNA None 8022 None Fasta, JSON

Protein domain

Protein domains of 16382.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase 16382.AA Ciliate-A4 692-953 40 7e-104 339.82 In-house 1-284 (284) Show / Hide 
Range on Protein: 692-953
Range on HMM: 1-284/284
Sequence Identity: 40% (115 aa)

FYFHSNIDNGSFGK----EITP---------IEQPFNSPKYQITSETSNDTQQ-QGIQISNEMEFDDILP--LSSSQQKTDIFLSQKQLSDQSIRSSSNN
||. . |. ||||.    ....         ..|      .|. ..  |   | | || | .|  .      ....||.  .  ||  . .|.  ... .
FYYYTSIGEGSFGTVDLYFFEIDYYQKCNFQDQQQNQQTWHQNNNQNYNQYNQNQYIQSSQQMQQQKQQFSFNQDQQQYNNMMFSQEMQQQQYQKFNQKW

FSTLESASQLNSQGIFLSSNHREKINFMISSQKREAINILPAAGKKIKKQDEFVRELFIMQTFQSQYMPSLFGQDIDQQILFMEYGLCNLFNLKQDSIKN
     .  | ..|   .  .    ...    |. .  ..||.|.||||.|.||.|||.||||.|..|||.||..||||||||||.|||.|..|||||..|
SQSHQQIYQYQNQDMHNYIQKQQNVYYQKI-QQFMKMQYLPVACKKIKTQEEFIRELYIMQTVQCEYMPKLFYYDIDQQILFMEMGLCSLYDLKQDSEQN

NYRLSDEFTYQVLLNIINAIESFLSF--KDPNSGEHKPIFHSDIKPQN-----IILTVKKENDLQNAQIQLLLIDYGGASIEIED
||..||||||..|.|.|.||||.||.  .......|.|.|||||||||     |.|||||  . |  ||||.|||.|||| ..||
NYCFSDEFTYSILINLIQAIESMLSNKAYNQQEQKHQPLFHSDIKPQNKIQLQIMLTVKKSKEDQQSQIQLMLIDFGGASFQLED
Kinase 16382.AA S_TKc 802-1062 13 9e-05 -106.91 SMART 1-231 (231) Show / Hide 
Range on Protein: 802-1062
Range on HMM: 1-231/231
Sequence Identity: 13% (41 aa)

FMI--------SSQKREAINIL---PAAGKKIKKQDEFVRELFIMQTFQSQYMPSLFGQDI-DQQILFMEYGLC---NLFNLKQDSIKNNYR--LSDEFT
. |         .. . ....      | |.||  . . ||. |..  .  .   |..    |   ..|||      .|| . ..  .. .|  ..   .
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK--EHIRREIQILKK-HHPNIVKLYDVFQDDHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPE-HA

YQVLLNIINAIESFLSFKDPNSGEHKPIFHSDIKPQNIILTVKKENDLQNAQIQLLLIDYGGASIEIEDYWTYYTPAFVSNKLWSKFVNDQNYQEKLNWE
  ..  |..|.|             . | | |.||.|| |.            .. ..| | | .                                   
RFYMYQICCALEYC---------HSHGIIHRDLKPENILLDE-----------HIKICDFGLARQL---------------------------------T

EIRYAEVYAACRSIQYVIVEKDK------------------QRLFKKDSTQLFMKEYWQLYPRTTRLINTIYQLEQKGRIDRVVVYSFAKQE-----QSL
 .     | |   .       .|                  . .|  .  ..| |        .  ... | .. ||   .|  .    . |        
TFCGTPWYMAPEVL-----GYGKCKCDWWSCGCILYEMLCGYPPFP-QMQMMFKKIG------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPW

I
.
F
Kinase 16382.AA Dicty3-Unclassified 910-945 41 0.000165 11.0 In-house 112-147 (252) Show / Hide 
Range on Protein: 910-945
Range on HMM: 112-147/252
Sequence Identity: 41% (15 aa)

KPIFHSDIKPQNIILTVKKENDLQNAQIQLLLIDYG
| . | |.|| ||.   .. |  ||  . | |||.|
KGYMHRDFKPENIMYQNQNQNFNQNNKQNLKLIDFG
Kinase 16382.AA Dicty9 912-959 32 0.000379 11.54 In-house 145-194 (356) Show / Hide 
Range on Protein: 912-959
Range on HMM: 145-194/356
Sequence Identity: 32% (17 aa)

IFHSDIKPQNIILTVKKENDLQNAQIQLLLIDYGGASIEIEDYWT----YYT
|.| |||| ||..  |..|   | ..   |.|.| ..  . .  .    |||
IIHRDIKPENIFF--KRYNNDGNIDLDCCLCDFGISQFVYTHNKNDQDLYYT
Kinase 16382.AA Dicty3 912-945 27 0.000415 9.24 In-house 133-183 (351) Show / Hide 
Range on Protein: 912-945
Range on HMM: 133-183/351
Sequence Identity: 27% (14 aa)

IFHSDIKPQNIILTVKKENDLQNA-----------------QIQLLLIDYG
| | |||..||.|  .... ..|                  .| . |||.|
IIHRDIKCDNIMLDNDEQHQCNNNNNKMSSTCRDIQCYYSNEINWKLIDFG
Kinase 16382.AA Ciliate-C4 912-945 41 0.000607 8.14 In-house 161-194 (361) Show / Hide 
Range on Protein: 912-945
Range on HMM: 161-194/361
Sequence Identity: 41% (14 aa)

IFHSDIKPQNIILTVKKENDLQNAQIQLLLIDYG
. |.|||| || .  | ..   |.  |. |||.|
WVHCDIKPENILVKYKSDFGGSNNIQQVKLIDFG