16375

Species: Tetrahymena
Alias: 3836.m02042, 6.m00449, TTHERM_00085270, 16375, PreTt16375, 1034
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Other
Family: Ciliate-A4

Sequence

Name Sequence Type Origin Length Description Download
16375.AA Protein None 1126 None Fasta, JSON
16375.kin_dom Protein Kinase Domain None 263 None Fasta, JSON
16375.NA RNA None 3381 None Fasta, JSON

Protein domain

Protein domains of 16375.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase 16375.AA Ciliate-A4 665-955 57 3.9e-183 602.6 In-house 1-284 (284) Show / Hide
Range on Protein: 665-955
Range on HMM: 1-284/284
Sequence Identity: 57% (171 aa)

FVYFSSIGEGSFGTVDLYFFKQNKLQESQTKDSNFLKQTWHTSNSTIKNSLPQSQLFSSSQSNQPNVLQFSNLSAQQNENPMIFSSEMQQEQSNIFSSKN
|.|..|||||||||||||||.....|.....|.....||||..|....|...|.|...|||..|....|||....||..|.|.||.||||.|...|..|.
FYYYTSIGEGSFGTVDLYFFEIDYYQKCNFQDQQQNQQTWHQNNNQNYNQYNQNQYIQSSQQMQQQKQQFSFNQDQQQYNNMMFSQEMQQQQYQKFNQKW

SQKNQRDYQYQNQDMANYIEKQQSVYIEKIDSEDSKNTQEEVTAQKFQEMQYLPVACKKIENLEEYQRELFIMQTVKCEYMPKLFYQDLDKQLLFMELGL
||..|..||||||||.|||.|||.||..||              |.|..|||||||||||...||..|||.|||||.|||||||||.|.|.|.||||.||
SQSHQQIYQYQNQDMHNYIQKQQNVYYQKI--------------QQFMKMQYLPVACKKIKTQEEFIRELYIMQTVQCEYMPKLFYYDIDQQILFMEMGL

CSLEDLKNDSEENGYKFSDEFTHQILVNLIKAVESLLSN--YNQETQQKQPLFHSDIKPSN-----VMLTVKKYKNQSTCSIKLLLIDYGGSSFALED
|||.|||.|||.|.|.||||||..||.|||.|.||.|||  |||..|..||||||||||.|     .|||||| |..    |.|.|||.|| || |||
CSLYDLKQDSEQNNYCFSDEFTYSILINLIQAIESMLSNKAYNQQEQKHQPLFHSDIKPQNKIQLQIMLTVKKSKEDQQSQIQLMLIDFGGASFQLED

Kinase 16375.AA S_TKc 665-1080 10 1.1e-05 -93.41 SMART 1-231 (231) Show / Hide
Range on Protein: 665-1080
Range on HMM: 1-231/231
Sequence Identity: 10% (45 aa)

FVYFSSIGEGSFGTVDLYFFKQNKLQESQTKDSNFLKQTWHTSNSTIKNSLPQSQLFSSSQSNQPNVLQFSNLSAQQNENPMIFSSEMQQEQSNIFSSKN
.     ||.|.||.| .   |        |.    .|.                                                              
YEILRKIGKGAFGKVYKCRHKK-------TGRIVAIKIIK------------------------------------------------------------

SQKNQRDYQYQNQDMANYIEKQQSVYIEKIDSEDSKNTQEEVTAQKFQEMQYLPVACKKIENLEEYQRELFIMQTVKCEYMPKLFYQDLDKQLLFMELGL
                                                               |  .||. |..  ....  ||..   | . |.| . .
---------------------------------------------------------------EHIRREIQILKK-HHPNIVKLYDVFQD-DHLYMVMEY

CSL--EDLKNDSEENGYK-----FSDEFTHQILVNLIKAVESLLSNYNQETQQKQPLFHSDIKPSNVMLTVKKYKNQSTCSIKLLLIDYGGSSFALEDYW
|.    ||.   ...|..     |.   .  ..  ...|.| .          ..   | |.||.|..|.             . ..| | . .    . 
CDGDLGDLFDYIKKRGRHGLRFPFPE-HARFYMYQICCALEYC---------HSHGIIHRDLKPENILLDE-----------HIKICDFGLARQL---TT

AFYTPAFVSAAVWEKLIKRSQSGQCLSWEEIRYAE----------VYAACRSIQFLLVPEQDKELFRKENYNQFLIQYSYLYPKTCSILKQVYFSENIGY
   || ...  |                    |            . . . . . .    |....|.|                                
FCGTPWYMAPEVL------------------GYGKCKCDWWSCGCILYEMLCGYPPFP--QMQMMFKKIG------------------------------

ISNIYESVLSESEKTLYTGL---NPQ----NIPFES-------HKIF
         |.. | .  ..   .|.                 |  |
---------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF

Kinase 16375.AA WEE 665-679 60 0.001672 7.7 In-house 1-15 (297) Show / Hide
Range on Protein: 665-679
Range on HMM: 1-15/297
Sequence Identity: 60% (9 aa)

FVYFSSIGEGSFGTV
| . ..|||||||.|
FQEVQKIGEGSFGEV

Kinase 16375.AA WEE 916-937 27 0.0311 3.38 In-house 135-171 (297) Show / Hide
Range on Protein: 916-937
Range on HMM: 135-171/297
Sequence Identity: 27% (10 aa)

HSDIKPSNVMLTVKKYKNQS---------------TC
| ||||.|.... |.  ||.               .|
HMDIKPENIFISKKMNCNQIVNNDQQNNNDWWFNMMC