Gene DhkF (Slime mold)

DhkF

Species: Slime mold
Alias: DDB0185098, DdisK269, DhkF
External Links: DictyBase Link ,
Annotation:

Classification

Group: Atypical
Family: HisK

Sequence

Name Sequence Type Origin Length Description Download
DhkF.AA Protein None 1109 None Fasta, JSON
DhkF.kin_dom Protein Kinase Domain None 8 None Fasta, JSON

Protein domain

Protein domains of DhkF.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
PAC DhkF.AA PAC 238-280 23 2e-06 28.94 SMART 1-43 (43) Show / Hide 
Range on Protein: 238-280
Range on HMM: 1-43/43
Sequence Identity: 23% (10 aa)

STETTITKKNGEKYPAEVFVKEISDIHSNSIGIMIIVRDITDQ
..|  . .|.|. ....| .. | | . . .... ..||||..
TWEYRFYRKDGSWIWVQVSWTPIRDWQGQPQYWICVHRDITER
PAS DhkF.AA PAS 226-277 15 0.000921 15.0 Pfam 65-120 (120) Show / Hide 
Range on Protein: 226-277
Range on HMM: 65-120/120
Sequence Identity: 15% (9 aa)

ILKQVCFENNNLSTETTITKK-----NGEKYPAEVFVKEISDIHSNSIGIMIIVRDI
.|.|.. .... ... .  ..     .|. ...|| .. . |.... .|.. ...||
QLWQCMQQGEE-RMFEITFRTPGQHRDGRPRWCEVRWCPYRDPGGEIHGFCCFMHDI
HisKA DhkF.AA HisKA 317-383 31 3.5e-23 84.25 SMART 1-89 (89) Show / Hide 
Range on Protein: 317-383
Range on HMM: 1-89/89
Sequence Identity: 31% (28 aa)

IKSQFLATISHEIRTPLNGIITMGEMLLS---------TSPLNTEQ-------------HDIAETIFGSSELLLSITSDILDFSKIEAS
 |.||||..|||.||||..|. . |.|.          ...|. ||             ... |||  ... .... .|.||.|.||| 
AKRQFLANMSHELRTPLTAIRGYAELLQDWYYKQRYHHWTDLDPEQRLPMLRREFNCEYREYLETIQREADRMQRLINDLLDLSRIEAG
HisKA DhkF.AA HisKA 317-383 42 1.3e-22 81.77 Pfam 1-69 (69) Show / Hide 
Range on Protein: 317-383
Range on HMM: 1-69/69
Sequence Identity: 42% (29 aa)

IKSQFLATISHEIRTPLNGIITMGEMLLSTSPLNTEQ--HDIAETIFGSSELLLSITSDILDFSKIEAS
 |.||||..|||.||||..|... |.|.  ..|. ||  ... |||  ... .... .|.||||.||| 
AKRQFLANMSHELRTPLTAIRGYAELLQDYTDLDPEQMRREYLETIQREAQRMQRLINDLLDFSRIEAG
HATPase_c DhkF.AA HATPase_c 430-547 28 1.2e-34 122.31 SMART 1-130 (130) Show / Hide 
Range on Protein: 430-547
Range on HMM: 1-130/130
Sequence Identity: 28% (42 aa)

GDPNRLIQIMLNMGTNAVKYTDR--------------GHIVFRISVISREQNRCKIKISIDDSGIGIGE------DQRAHLFEPFHQIDS--------SS
|||.|| |...|  .||.|.|.               |.|  |..            |.. |.|.|| .      ... ..|||| . |.        |.
GDPDRLRQVLWNLLDNAIKHTPEGHADPDLHDGKPGGGRITVRVH-----------RITVEDNGPGIPPEMHKSIEDIPRIFEPFYRTDDSPSRMCPDSR

TRKYGG--SGLGLAISSKLAKLMGGEVILERSKPGVGSLFSVTLNFEQ
.|||||  .||||.|. ......||.. .|       . |..||  |.
SRKYGGGLTGLGLSICKRIVEQHGGTIWVE-------TTFTFTLPLER
HATPase_c DhkF.AA HATPase_c 430-546 35 9.2e-33 116.25 Pfam 1-120 (120) Show / Hide 
Range on Protein: 430-546
Range on HMM: 1-120/120
Sequence Identity: 35% (45 aa)

GDPNRLIQIMLNMGTNAVKYTDR-GHIVFRISVISREQNRCKIKISIDDSGIGIGE------DQRAHLFEPFHQIDS-SSTRKYGG--SGLGLAISSKLA
|||.|| |...|  .||.|.|   |||  |..          . |.. |.|.|| .      ......|||| . |. |. |||||  .||||.|. ...
GDPDRLHQVVWNLVDNAIKHTPEGGHITVRVHRDD-----DHVRITVEDNGPGIPPEMHSIAEDIPRIFEPFYRTDPDSR-RKYGGGLTGLGLYICRRIV

KLMGGEVILERSKPGVGSLFSVTLNFE
...||.. .|..  | |. |..|| .|
EQHGGTIWVESEP-GGGTTFTFTLPLE
Kinase DhkF.AA HisK 430-540 27 2.5e-24 84.37 In-house 1-158 (164) Show / Hide 
Range on Protein: 430-540
Range on HMM: 1-158/164
Sequence Identity: 27% (45 aa)

GDPNRLIQIMLNMGTNAVKYTDRG------HIVFRISVIS-----REQNRCK--------------------IKISIDDSGIGIGEDQRAHLFEPFHQID
 ||||. ||..|. .||.|.|. |      .| . .. |.     .. |                       |.||. |.|.|. |.|   .|..| .||
SDPNRIKQILINLISNALKFTQKGGIPFQGYIKIKVEQINTQNNIKY-N--SIFIQKIQENMVQEQLQQKNLIQISVQDTGCGMPEEQQKKIFKMFGNID

----------SSSTR--KYGGSGLGLAISSKLAKLMGGE-------VILERSKPGVGSLFS
          . .    .  | ||||.|. .|||..| |        |   |..|.|| ||
DQHQMIKKTFNHQNKKNNQHGCGLGLTICNNLAKGLGPEHNQNGNRGIQVQSEVGKGSTFS
REC DhkF.AA REC 927-1044 22 1e-25 92.67 SMART 1-150 (150) Show / Hide 
Range on Protein: 927-1044
Range on HMM: 1-150/150
Sequence Identity: 22% (36 aa)

PRILLVDDN----AVNRKVVK------LQLKKLGYD--------CDTATNGF-------EGFEMQKKD-------------NYELIFMDLNMP-------
.|||.|||.    .|.|....      . |.|.||.        .|.| .|        |..|. ..              .. ||.||..||       
MRILIVDDDPAMAPVIREMLRNYTVIQRLLEKEGYENKMWMVEVVDEA-DGETLMNEIWEALELLQEHRDKKEDATTDQSEPPDLIIMDIMMPGDPFEDG

LCDGSMASKLIRSHEELNNYKSRANIVGLSATYLHGSKDYCVSMGMDDFVVKPLKLQPLGELV
  ||  . . ||             |. |.|      .  .  .|.||...|| ... | . .
GMDGIELCRRIR------------PIIMLTAHDDEEDRVRALEAGADDYITKPFDPEELLARI
Response_reg DhkF.AA Response_reg 929-996 35 2.9e-17 64.41 Pfam 1-71 (115) Show / Hide 
Range on Protein: 929-996
Range on HMM: 1-71/115
Sequence Identity: 35% (25 aa)

ILLVDDNAVNRKVVKLQLK-KLGY-DCDTATNGFEGFEMQKKDNYELIFMDLNMPLCDGSMASKLI-RSHE
.|.|||. ..|....  |. | || ....|..| |. |. ..  . ||.||.||| .||  . . | | |.
VLIVDDHPLMREGLRQILEQKEGYEVVAEADDGEEALEWWQEHHPDLIIMDINMPGMDGLELCRRIRRQHP
Response_reg DhkF.AA Response_reg 1022-1045 20 0.596587 5.97 Pfam 92-115 (115) Show / Hide 
Range on Protein: 1022-1045
Range on HMM: 92-115/115
Sequence Identity: 20% (5 aa)

CVSMGMDDFVVKPLKLQPLGELVK
.   |..|...|| ... | . ..
ALQAGANDYITKPFDPDELHAAIR