Gene DDB0220693 (Slime mold)
DDB0220693
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| DDB0220693.AA | Protein | None | 1578 | None | Fasta, JSON |
| DDB0220693.kin_dom | Protein Kinase Domain | None | 8 | None | Fasta, JSON |
Protein domains of DDB0220693.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| BROMO | DDB0220693.AA | BROMO | 737-843 | 33 | 1e-30 | 109.27 | SMART | 1-118 (118) | Show / Hide |
Range on Protein: 737-843 Range on HMM: 1-118/118 Sequence Identity: 33% (40 aa) LTPVFKRCLDLLEELFEHQHSP------------PFLVAVDPYALGILDYFDVIKHPMDLGTIKASLIGGGYDTIDKFAEDCRLVFSNAKTYNPSTNPVH . .| | ||.|...|.|. ||.. ||. |.. ||.|.||.||||.||| | .. |.... |..|..|.|.|..|||. .|. DPK-QKKCQELLKEVMCHKHDHGDPMNRGRPYAWPFMQPVDRKELNYPDYYDIIKNPMDLKTIKKKLENHQYQSMEEFVDDFMLMFNNCMTYNEPDSEVY IMAQSLEDVFEKGFPKVLI ||. |...||. . .. KMAKKLQKFFEEKWREFPP |
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| Bromodomain | DDB0220693.AA | Bromodomain | 744-829 | 35 | 1.1e-25 | 86.08 | Pfam | 1-89 (89) | Show / Hide |
Range on Protein: 744-829 Range on HMM: 1-89/89 Sequence Identity: 35% (32 aa) CLDLLE--ELFEHQHSPPFLVAVDPYALGILDYFDVIKHPMDLGTIKASLIGGGYD-TIDKFAEDCRLVFSNAKTYNPSTNPVHIMAQS |. ... ...|| . ||. ||| .. ||.|.||||||| ||.. | . |. .|. | .| .|...|..|||.. |.. .|. CDQIMDMKYIMEHPICEPFWHPVDPDRDEYPDYYDIIKHPMDLSTIQQKLKNNKYRNNIAEFWHDMELMWHNCMTYNGPDSPIYKDARK |
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| Kinase | DDB0220693.AA | Dicty3 | 1269-1383 | 35 | 4.5e-09 | 25.9 | In-house | 191-260 (351) | Show / Hide |
Range on Protein: 1269-1383 Range on HMM: 191-260/351 Sequence Identity: 35% (41 aa) SSNNNNNNNNNNSNNNNSNNNNNNVNNNNNNHNNNNHNNNINNNNNNINNNTTQPSPSQQSTSLTNEPIKPPTILQTVKKPALPVTGSVASWSFDPTNNK .||||||||.|| |||| |||||| |||||| |||| ||| |||...|||| . YSNNNNNNNYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNVKIINNN---------------------------------------------IYSN ESSSSSSTSSTSSTS ........|...... KQYKQKCYSICGTIH |
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