Gene DDB0190004 (Slime mold)
DDB0190004
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| DDB0190004.AA | Protein | None | 436 | None | Fasta, JSON |
| DDB0190004.kin_dom | Protein Kinase Domain | None | 8 | None | Fasta, JSON |
Protein domains of DDB0190004.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| Act-Frag_cataly | DDB0190004.AA | Act-Frag_cataly | 52-370 | 39 | 2.6e-160 | 543.66 | Pfam | 1-384 (384) | Show / Hide |
Range on Protein: 52-370
Range on HMM: 1-384/384
Sequence Identity: 39% (166 aa)
SSPSSSTNIDYNIPTFSNIQNIDWKSISSVEKIDFG--------------------NSNIFLLITFNNNNNINNINNLNCNCVNNNNNNICNNNCINNNN
..||...||..|....|.||.|||...||...||.. ||.||...|||.|||....|....|
DNPSKWENIAKNAMMYSDIQCIDWNMLSSIHHIDHSISSNDHSENDMSKPLEVTVNNSGIFFVETFNWNNNDDYFNKCHFN-------------------
NTNDENPSIINNYNESQILLKSSST---IAHDVYAYVLEGILKYPIPEMRLLDFSNLEYTEMSYNLL----IHSKDDQSLNDFIKSELEKSF-----FLI
|...|||.| |....|.|||. .|.||||.||.....| |.|.||..|. ...|.|..|.|.|.|||||.| |||
----------------QVVIKSSPTRMAIQQECYCYVLCMWLGYPIPQMRVIHWCNEEWTQMSECLQKAQDQATKMDDQLFDMICSELEKPFELSRCFLI
LEYRNNGKRFNELNHK------EYFSGSK-GGKKFKQLGKIIAFDIFC--------------NNFCKLPSPPLNWNSSTFFSNILCYDSPDKNGWYFSLI
.||..|||.|||.||| ||||..| |.||.||||||.|||||| ||.|.||.....||.|..||||.|||.|.|||||||.|
MEYVHNGKTFNEMNHKRAGKIFEYFSPQKNGEKKMKQLGKIMAFDIFCNINNNICNFNYNNCNNSCRLPCRIIWWNNSGNFSNIMCYDRPNKNGWYFSMI
NSNIS---FLNTSPFTIGY-------------------RDHLNRLKLLLFSIFQ---NPSTESVQ--------------IKLMRDHLLKCQGIKLSGSSV
||||. .||.|.||.|| |.|.||.|||.||||| ||..|||| |. ||||..|.....||..||
NSNIHHECCLNNSSFTFGYIYGLDSYSFERPPSYYTNVREHMNRVKLLMFSIFQAQRNPRHESVQRSRLSIHDQMKVSCIHHMRDHIYKHCNYNLSSMSV
---SYLQK-----GIAKGI
...|| ||||||
HWNISMQKDFHIVGIAKGI
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