Gene AdckA (Slime mold)

AdckA

Species: Slime mold
Alias: DdisK247, DDB0216427, abkA, AdckA
External Links: DictyBase Link ,
Annotation:

Classification

Group: Atypical
Family: ABC1
Subfamily: ABC1-A

Sequence

Name Sequence Type Origin Length Description Download
AdckA.AA Protein None 565 None Fasta, JSON
AdckA.kin_dom Protein Kinase Domain None 8 None Fasta, JSON

Protein domain

Protein domains of AdckA.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase AdckA.AA ABC1-A 232-440 40 2.3e-75 256.71 In-house 1-216 (216) Show / Hide 
Range on Protein: 232-440
Range on HMM: 1-216/216
Sequence Identity: 40% (94 aa)

FQDDPIAAASIGQVHRAITLDGKEVAVKVQYPGVADSITSDIKNLSSLLKM--IVPETAYIEKSLESARSELLLETDYLNEASNQLKFKSLLESSINSGT
| . | |.|||||||.|   ||.|||||.|||||| || ||| || ....|  . |.    ....  || || .| ||  ||  . ||. ||        
FEEMPFACASIGQVHQAVLKDGREVAVKIQYPGVAESIDSDINNLMMVMNMSGMFPKGMFLDHFIDYARRELHWECDYQREARCMQKFRQLL--------

NGSFKYLKDLYVPNVIMELTTKRILTTEFVHGTSIDKITIENHNQETRDWISKNILSLCLA---------------ELFEFNFMQVDPNWTNFVVDFE--
    |   . ||| || |..| |.||.| . |. ||.   .   ||.|. |. ||. |||                |.||. ||| |||| ||  |    
----KDWPFFYVPHVIDEYCTDRVLTMELMYGFPIDQ--CQGLSQEIRNYICYNIMRLCLREVEYIFLSTFIIIDFEIFEWRFMQTDPNWANFFYDKHPK

--NKRINLLDFGACRNYKSEFLFNYLKSIE
   ... |||||| | |  .|   | . | 
TGQHKVELLDFGASREYGKDFTDHYMQIIK
ABC1 AdckA.AA ABC1 219-345 36 1.1e-35 122.31 Pfam 1-126 (126) Show / Hide 
Range on Protein: 219-345
Range on HMM: 1-126/126
Sequence Identity: 36% (49 aa)

NELGENWRSKFQLFQDDPIAAASIGQVHRAITLD-GKEVAVKVQYPGVADSITSDIKNLSSLLKM---IVPE---TA-YIEKSLESARSELLLETDYLNE
.||| .|. .|| | . |||||||.||||| . | |.|||||||.|||......||.|.  ..|    . |.   .   ... .. .|..|  | ||..|
EELGCPWEEIFQEFDEEPIAAASIAQVHRARLKDDGEEVAVKVQHPGVKKRMMRDIYNMRWMAKWVKRFFPGYRRQRFDLMWIVDEFRKNLPWELDYRRE

ASNQLKFKSLLESSINSGTNGSFKYLKDLYVPNVI
| |. .|. ...           .  ...||| |.
AKNMERFRENFRHW---------HRQPWVYVPKVY
Kinase AdckA.AA ABC1 219-345 36 1.2e-34 121.47 In-house 1-123 (123) Show / Hide 
Range on Protein: 219-345
Range on HMM: 1-123/123
Sequence Identity: 36% (49 aa)

NELGENWRSKFQLFQDDPIAAASIGQVHRAITLDGKEVAVKVQYPGVADSITSDIKNLSSLLKM--IVPE-----TAYIEKSLESARSELLLETDYLNEA
 .|| ||   |. | . |.|||||.|||||   || .||||||.|||...| .||.|.. ..||  ....         .. ......|| .| |..|||
QDLG-NWEDVFSEFDEKPFAAASIAQVHRAKLKDGQTVAVKVQHPGVREQIHYDINNMEMVVKMCDWFFPGPDFKWFFLMWFVDEFQKELPWECDFNNEA

SNQLKFKSLLESSINSGTNGSFK--YLKDLYVPNVI
.|. |.. |            ||    ...|||...
RNAEKCRQL------------FKKFHWPFFYVPRIH
Kinase AdckA.AA ABC1-B 219-281 42 6.8e-15 51.13 In-house 1-62 (125) Show / Hide 
Range on Protein: 219-281
Range on HMM: 1-62/125
Sequence Identity: 42% (27 aa)

NELGENWRSKFQLFQDDPIAAASIGQVHRAITLDGKEVAVKVQYPGVADSITSDIKNLSSLLK
  || |    |  | . ||||||. |||||   || .||||||.| . ...  |.. .. ..|
KDLG-NIEDVFSEFDQKPIAAASLAQVHRAKLHDGETVAVKVQHPWLRKQFHYDMMMMELFVK
Kinase AdckA.AA ABC1-B 333-345 46 0.125096 2.92 In-house 113-125 (125) Show / Hide 
Range on Protein: 333-345
Range on HMM: 113-125/125
Sequence Identity: 46% (6 aa)

FKYLKDLYVPNVI
|| .. ||||...
FKHFDFLYVPRIH