Gene RET (Human)
RET
Sequence
Protein domains of RET.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
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Cadherin | RET.AA | Cadherin | 172-261 | 27 | 2e-18 | 66.9 | Pfam | 1-102 (102) | Show / Hide |
Range on Protein: 172-261 Range on HMM: 1-102/102 Sequence Identity: 27% (28 aa) PSFRIRENRP-PGTFHQFRLLPVQ-FLCPNISVAYRLLEGE---GLPFRCAPDSLE---VSTRWALDREQR-EKYELVAVCTVHAG---AREEVVMVPFP ..|...|| | . . .... . .|.|| .. |..|.|. | ||. ||. . ..|.. |||||. ..|.|. ..| |.. .|. ...| YHFSVCENAPVGTFVMTVTATDPDDPLGPNWRIFYSILGGNPDPGHWFRIDPDTGDNGIITTTKPLDREQQNGQYHLTVMATDHDDGGPPRSSTTTVTIT VT |. VC |
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Cadherin | RET.AA | Cadherin | 485-505 | 29 | 1.122162 | 5.05 | Pfam | 79-102 (102) | Show / Hide |
Range on Protein: 485-505 Range on HMM: 79-102/102 Sequence Identity: 29% (7 aa) VVATDQ-Q--TSRQAQAQLLVTVE |.|||. . ..| . ... .||. VMATDHDDGGPPRSSTTTVTITVC |
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Kinase | RET.AA | Ret | 724-1007 | 73 | 2e-255 | 854.85 | In-house | 1-293 (293) | Show / Hide |
Range on Protein: 724-1007 Range on HMM: 1-293/293 Sequence Identity: 73% (215 aa) LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PLLLIVEYAKYGSLRGFLRESR |.|..|||||.||.||||.|||..|..|||||||||||.| |..||..||||||..||||||||||||||||.||. |..|||||.|||.||.|||.|| LQLDDTLGEGHFGQVVKAQAFHIRGHPGYTTVAVKMLKRNTANSSEYHDLLSEFQLLKQVNHPHVIKLYGACIQDDPFPTCLIVEYCKYGCLREFLRLSR KVGPGYLGSGGSRNSSSLDHPD-ERALT-----MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIP |.||.|..|.|.||.|..|||| ..... |...|||||||..||.||.|||||||||||||.||||||..|||||||.|||||.|||||||..||| KIGPYYEYSIGNRNCSIVDHPDGKDVINRFDIGMKMIISFAWQICKGMHYLSEMKLVHRDLAARNVLVAEGRICKISDFGLTRDVYEDDSYVKRSKDRIP VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK |||||||||.||.|||.|||||||||.|||||.|.|||||||||||..|||||.||.||.||||||||.|.|||||||||||||..||||.|| VKWMAIESLYDHVYTTKSDVWSFGVLCWEIVTMGANPYPGIPPERLWQLLKTGYRMDRPENCSEEMYRIMRQCWKQEPDKRPVFKFISKDFEK |
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Kinase | RET.AA | Pkinase_Tyr | 724-1005 | 42 | 7.4e-154 | 521.7 | Pfam | 1-270 (270) | Show / Hide |
Range on Protein: 724-1005 Range on HMM: 1-270/270 Sequence Identity: 42% (123 aa) LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE--LRDLLSEFNVLKQV-NHPHVIKLYGACS-QDGP--LLLIVEYAKYGSLRGFLR ...||.||||.||.|.|.|.. .. . ..||||||||.|.... ..|...| ...|| .||....|||.|. |..| .....||...|.|. .|| ITFGKKLGEGAFGEVYKGTWKG-DPDNTKIPVAVKMLKEGAMHEQNCREDFMREAKIMKQLGHHPNIVRLYGVCTDQGEPNQIYIVMEYMPHGDLLDYLR ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY-VKRSQGRIPVK . | .|...||| ||....|||..||.||......||||||||.||.|....||.||||.||.|..| | .||. |..|.| KHR--------------------EDKQPLTMKDLLQMCWQIAKGMEYLESKNCIHRDLAARNCLVTENNVVKICDFGLARDIYNDDYYYRKRGGGKLPIK WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP-YPGIPPERLFNLL-KTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL ||| |.... ..||.|||||||||.|||.|.|. | |||...|...... . |.||..|.||..|.|.||.|||...|..|| |..| .| WMAPECINYGKFTTKSDVWSFGVLMWEIFTYGEQPTYPGMSNEEVYEYIYEDGYRMPCPENCPDEIYDLMKQCWHYDPEDRPTFSEIHEQL |
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Kinase | RET.AA | TyrKc | 724-1005 | 38 | 3.1e-151 | 509.62 | SMART | 1-280 (280) | Show / Hide |
Range on Protein: 724-1005 Range on HMM: 1-280/280 Sequence Identity: 38% (121 aa) LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV--NHPHVIKLYGACSQD-------GPLLLIVEYAKYGSLRG ..|||.||||.||.|.|.|. ..||||||||.| ..|...| ...... .||....|||.|.|. .||....||...|.|. ITLGKKLGEGAFGEVYKGTWK--------IQVAVKMLKEDA----REDFMREARIMCKLGGHHPNIVRLYGVCTQQGRNFMYIEPLMIVMEYMPHGDLKD FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE-------DSYVK .||..|. |.| ||.||.|||..||.||......||||||||.||.|.. .||||||||||.|.. | |.| YLRKHRPK-----------------------LCMKDLLSFCWQIACGMEYLHSKNCIHRDLAARNCLVGENHTVKISDFGLSRDIYDDDQQGESKDYYRK RS--QGR--IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG-----IPPERLFNLLKTGHRMERPDN--------CSEEMYRLMLQCWKQ .. .|. .|..|||.|.......||.||||||||..||| |.|. |||| ..........|.|.||..|.| |..|||..|.|||. KEHKGGKTMLPIRWMAPECINYGKFTTKSDVWSFGVCMWEIFTYGQQPYPGMIQQMMSNQEVIEYVKQGYRMPQPPNDYPMSFVCCPDEMYQIMKQCWHE EPDKRPVFADISKDL .|..|| |..| ... DPEDRPTFSEIHECF |
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Kinase | RET.AA | FGFR | 724-1005 | 49 | 1.9e-143 | 482.85 | In-house | 1-293 (293) | Show / Hide |
Range on Protein: 724-1005 Range on HMM: 1-293/293 Sequence Identity: 49% (145 aa) LVLGKTLGEGEFGKVVKATAFHLKGR--AGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR |.|||.|||| ||.|..|.|. .. . .||||||||.|.. .| || || ..| . |. .|.| |.|.|.||| ||||.. | || |||. | LTLGKMLGEGCFGQVWMAEAKGIDCDRPEKEITVAVKMLKMNHTDKDLSDLVSEMEMMKMIGKHKNIINLLGCCTQEGPLYVIVEYCHHGNLRDFLRARR KVGPGYLGSGG------SRNSSSL-DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRI |. | .. |... | || ||.|.|.|. .||.||| | .||||||||.|| .. |||.||||.||. . | | |.. || PPGMDYKKDSQEYTDYKPRKPEQQDDIELIPNLTQKDLVSCAYQVARGMEYLASRKCIHRDLAARNVLVTDDYVMKICDFGLARDIHCIDYYRKTTNGRL PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP-PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL |.|||| |.||| .||.||||||.||||||| |.|| |||.|| | |. .||.|||||.| |||.|.| .| |||. .|. || |. . .| PIKWMAPEALFDRVYTHQSDVWSYGVLLWEIMTYGGQPYPHIPSVEELYKYLKEGHRMEKPHNCSQEIYHMMCQCWHFKPCQRPTFKQLVEYL |
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Kinase | RET.AA | TK | 724-1005 | 25 | 4e-129 | 435.28 | In-house | 1-486 (486) | Show / Hide |
Range on Protein: 724-1005 Range on HMM: 1-486/486 Sequence Identity: 25% (125 aa) LVLGKTLGEGEFG---KVVKATAFHLK--------------------GRAGYTTVAVKMLKENASPSELRDLL-------------SEFNVLKQVN---- ..|||.||||.|| .| |.... .. .. | |.|||||||| .. |. . .. .| ...|. . ITLGKKLGEGQFGSFGEVYKGEWRGRNPWNGKRFPCHMTVTLKCKNGKEGGKTPVAVKMLKEGDAMSQEEFFDEEMHDRDGGEDFLEEAEEMKMMCHSLG -HPHVIKLYGACSQD------------GPLLLIVEYAKYGS----LRGFLRESRKVGPGYLGSGG---------------------SRNSSSLDHPDER- ||....|||.|.|. .|.....||...|. || .||..|. . .. ... |..|.| . |.|. HHPNIVRLYGVCTQGEPKPCFEVVVHQEPWMIVMEYMPHGDMDGSLRDYLRKCRPKFQHEQDCPDNQHNKYPPSKLHHCMKGDITYSHESNSPC-PEEQD -----------ALTMGDLIS-------------------FAWQISQGMQYLAEM------KLVHRDLAARNILVAEGRK-----------MKISDFG--- .||. ||.. ..|||..||.||... ..|||||||||.||.|. . ||.||| YDDDLIKDHPPPLTTKDLLQMAWQWCLTCKHQLTMHQLLMCWQIACGMEYLHSKNCEFIQNFVHRDLAARNCLVGENNVCKWHFDGCGPVCKIADFGLSR -----LSRDVYEEDSYVKRS------------------------QGRIPVKWMAIESLFDHI---------YTTQSDVWSFGVLLWEIVTLG-GNPYPGI |.||.|..| |...| .|..|..||| |.|.|.. .||.|||||||||.|||.|.| . .|.|. QGSGVLARDIYSDDDYYRKSSYGTGRPMWPFEDDPWQDYYRQQSGGKLPIRWMAPECLNDRVFSEAEKYGKFTTKSDVWSFGVLMWEIFTYGQEPYYGGM PP---------ERLFNLLKTG--------------HRMERPDNCS--------------EEMYRLMLQCWKQEPDKRPVFADISKDL . . ....|..| .||..|..|. ||.|.||.|||. .|..|| |... . | SNQDVWKDGDNQEVMEYLRRGGRLCRSGLNEVGYRMRMPQPPHCPDWMRYRMHPPHCPPEEYYDLMQQCWHYDPEDRPTFSQLHEQL |
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Kinase | RET.AA | VEGFR | 724-1005 | 42 | 5.5e-127 | 428.17 | In-house | 1-332 (332) | Show / Hide |
Range on Protein: 724-1005 Range on HMM: 1-332/332 Sequence Identity: 42% (142 aa) LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACS---QDGPLLLIVEYAKYGSLRGFLRES | ||| ||.| ||.|..|.|| ... .. ||||||||||.| || | |.|| .|. . .| | . |.| | |||. |||| ..| | .|| LKLGKMLGRGAFGQVHEASAFGIRKMETCTTVAVKMLKEGATASEHRALMSELKMLIHIGHHLNVVNFLGCCTKNIQKGPLMVIVEYCCFGNLSNYLRTK RKV-------------GPGYLG---------------------SGGSRNSSSLD--HPDERA-------LTMGDLISFAWQISQGMQYLAEMKLVHRDLA |. . ..| ....| |.| ||| . ||| |||... |. || .||. | .||||| RMYFVPYPDKSPHMRQRKECMGPQDHQDHKRRRDSGNSFQSSFGSFFRMKKSYDDVEPDEVFEDMWKDPLTMEDLICYSFQVARGMEFLASRKCIHRDLA ARNILVAEGRKMKISDFGLSRD-VYEEDSYVKRSQ-GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP-PERLFNLLKTGHRMERP |||||..| ||.||||.|. | . ||.. . || | ||||.||.||..|||.|||||.||.|||| .||| ||||. | ..| || | ||..| ARNILLCENNVVKICDFGLARHGIYKDPDYVRKGDQGRLPIKWMAPESIFDKVYTTYSDVWSYGVFLWEIFSLGGSPYPGVQIDEEFCNRLKDGYRMRAP DNCSEEMYRLMLQCWKQEPDKRPVFADISKDL | | |.|. ||.|| .|| || |.. . | DYCTPEIYHIMLDCWHKEPEERPHFSELVEHL |
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Kinase | RET.AA | TK-Unique | 724-1005 | 41 | 1.5e-121 | 410.09 | In-house | 1-294 (294) | Show / Hide |
Range on Protein: 724-1005 Range on HMM: 1-294/294 Sequence Identity: 41% (125 aa) LVLGKTLGEGEFGKVVKATAFHLKGRAGYT-TVAVKMLKENASPSELRDLLSEFNVLKQVN-HPHVIKLYGACSQDG-PLLLIVEYAKYGSLRGFLRESR |..|...|||.|| | ..... ... . . |||||||.||.. . .|.|.|....|.. ||......|.| .. | ..| ||. .|.|...||..| LEVGDVIGEGAFGQVWRGEVWGIWKHWDKQKCVAVKMLKDNATDTDKQDFLKEIQMMKELGDHPNIVQCLGCCTKSDEPWMIIMEYCPCGNLQHYLRTCR KV--GP---GYLGSGGSRNSSSLDHPDERA----LTMGDLISFAWQISQGMQYLAE--MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR- .. .. | | ...|. .. ....||..||||| .||.|||. .| |||||.|||.|..|. . ||.|||..|||| . |.. PAMRQHQTYGNLK-------FDFHHMPDKPRTEPISPKDLYHFAWQIACGMEYLASQRKKIVHRDLCARNVLLTEDKVCKICDFGMARDVYTNGVYSMMC SQGRIPVKWMAIESLF--DHIY-TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNC-SEEMYRLMLQCWKQEPDKRPVFADISKD ||||||..||| ||| ...| ||.|||||||||.|||.|||. ||||.|.... .... |.||..|..| |.||| || .||. ||..|| |..| . SQGRIPIRWMAPESLKCYHGMYHTTKSDVWSFGVLMWEIFTLGACPYPGMPWKDIMECIRDGYRMPQPEHCCSHEMYNLMKSCWQWEPEERPSFRQIKHR L | L |
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Kinase | RET.AA | UTK | 724-1005 | 35 | 5.8e-109 | 368.3 | In-house | 1-296 (296) | Show / Hide |
Range on Protein: 724-1005 Range on HMM: 1-296/296 Sequence Identity: 35% (111 aa) LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELR---DLLSEFN---VLKQVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGF . ||..||.|.|| | ||.. . ..... |||| .. . ... | . |.. | . ..||.. ||.|..|.| |.|..|.....||.. |.|| . VQLGRQLGQGAFGEVHKARFTQCSEHMYEMDVAVKVCQHHADAQQEPEPYPDFMEEARELQMMKQFHWHPNVLRLVGVCTQEEPWMIVTEYMENGDLRSY LRESRK-VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR-------KMKISDFG---LSRDVY---- || .|. .. ... .||. .....||.|. |||||.....|||||||||.||.. | . ||.||| .||.|. LRRHRPTPP-----------------ACPHWLTLHQRLCMAWDIARGMQYLHSCGFVHRDLAARNCLVHMHRMMWHCMMVCKIADFGRGGMSRRVNTFHF -----EEDSYVKRSQGRIPVKWMAIESLFDH-IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG--HRMERPDNCSEEMYRLMLQCWKQEP | . | ...|.|.|..||| |.| .| .||.||||||||..|||.| | ||||. .... . | .||..|. |....||||..||...| SNRYWESYYYMAQHQDRWPIRWMAPEALTHHTRFTTKSDVWSFGVVCWEIWTWGRLPYPGMSNMQVWHQVCNGGRYRMPCPWDCPHPVYRLMHRCWHYDP DKRPVFADISKDL ..|| | |. . . QERPDFEDLVQQM |
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Kinase | RET.AA | Tie | 732-1005 | 46 | 1.8e-103 | 315.88 | In-house | 1-267 (267) | Show / Hide |
Range on Protein: 732-1005 Range on HMM: 1-267/267 Sequence Identity: 46% (128 aa) EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG || ||.|.||. .| . ||.||.|| || . || | |. .| || .| | ||| . | | . .|||.|| | |||.|| . . EGNFGQVMKAM---IKKDGLKMEVAIKMMKEYASEDDHRDFMGELEVMCKVGHHPNIINLVGACEHRGYLYVAIEYAPYGNLLDFLRKSRVIETD--PAF GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTT . ... . .|. .. || . .|||||.. ...|||||||||||.| ||.|||||| .. |||. ||.||.||||||| .||| AREHTTRFKVNVASTLSSQQILHFAADVARGMQYLSQKQCIHRDLAARNILVCENYVCKIADFGLSR---GDEVYVKKTMGRLPVRWMAIESLNYSVYTT QSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL .|||||.||||||||.||| || |. |.. | |.|||.| || .|.| || |||.. | .|| || | .| KSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEQPRNCDDEVYDLMRQCWRDRPYERPPFAQIAVQL |
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Kinase | RET.AA | Src | 724-1005 | 36 | 2.3e-97 | 329.77 | In-house | 1-255 (255) | Show / Hide |
Range on Protein: 724-1005 Range on HMM: 1-255/255 Sequence Identity: 36% (104 aa) LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG . | . ||.| || | ... | | |||| ||. . ..| | ...|.. |.....|| |||. | . . || . ||| .|.. IKLCRKLGQGQFGEVWMGY------WNGNTKVAVKTLKPGT--MSPEAFLQEAQIMKKLRHEKLVQLYAVCSQEEPIYIVTEYMSHGSLLDYLKK----- PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE--EDSYVKRSQGRIPVKWMAIE ...|.| . .||..|.|...||.|| .|...||||||||.|| |. |. |||| | . . .| |. |. ..|.||.| | ----------------DGEGRHLHLPQLIDMAAQVAEGMAYLESMNYIHRDLAARNVLVGENNVCKVADFGLAR-LIKEDDDEYCARHGAKFPIKWTAPE SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYR-LMLQCWKQEPDKRPVFADISKDL . . .|. |||||||.||.|||| | |||| . . .. | || .|.|| .|.| .|||||...|..|| |. . . | AINYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNHEVLQQVERGYRMPCPHNCPDELYEQIMLQCWHKDPEQRPTFEYLQWFL |
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Kinase | RET.AA | Fer | 724-1006 | 30 | 1.6e-86 | 293.74 | In-house | 1-283 (283) | Show / Hide |
Range on Protein: 724-1006 Range on HMM: 1-283/283 Sequence Identity: 30% (93 aa) LVLGKTLGEGEFGKVVKAT-AFHLKGRAGYT----TVAVKMLKENASPSE-LRDLLSEFNVLKQ-VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL .||| |||| ||.| |.. ....| . . |.||..|.... | ..... | ..... .||.|.|.|| |... |.... |... |||. .| VTLGKKLGEGAFGEVYKGRRTLKCKKGKWHVVNKVAVKVKKCKCEDATKEQIKEFMHEARIMRNNYDHPNVVKFYGVCVDEQPIMIVMEFCNGGSLDSYL RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE-GRKMK--ISDFGLSRD--VYEEDSYVKRSQG ... . .... ..| .. |...||.|| ... .|||.||||.|. . . | | |||||.||. .|..|.. | . KKNKNK----------------------TVSDNEKIRMCYQAACGMEYLHSKNCIHRDIAARNCLYHKDKVKKKCKISDFGMSRQCSDYGYDYKMKEKAC RIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG----IPPERL-----FNLLKTGHRMERPDNCSEEMYRLML-QCWKQEPDKRPVFADI ..|..|.| |.. . ||.. .|||||||..||| | | |||| . . . . | |..| |... .|....|. |||...|..|| ...| KVPIRWLAPETWQTGIYSPKTDVWSFGVMCWEIFTNGAEPYPGQPHGMKMTNVKKQARKWIIKKGYMMPMPNHMPPEIMQIMMKQCWQKDPEDRPTMKEI SKDLE . |. CQKLK |
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Kinase | RET.AA | PDGFR | 842-1005 | 51 | 2.4e-83 | 267.37 | In-house | 194-358 (358) | Show / Hide |
Range on Protein: 842-1005 Range on HMM: 194-358/358 Sequence Identity: 51% (85 aa) DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL |...|| ||..|. |. .|| .|| |||||||||.|...|. || |||| ||. . .|| . | |||||| ||.|| .|||||||||.|.|| DSNVLTYWDLLCFSYQVAKGMEFLASKNCVHRDLAARNVLLCHGKVVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTTQSDVWSYGILL WEIVTLGGNPYPGIPPERLF-NLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL ||| .||||||||.| . | .. | | ||..|. .||.| | .|| .| ||| | ... | WEIFSLGGNPYPGMPVDSKFYKMIKEGYRMAQPFHAPEEIYEIMQKCWDFDPEKRPTFQQLCQFL |
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Kinase | RET.AA | S_TKc | 724-1009 | 22 | 2.4e-47 | 164.54 | SMART | 1-231 (231) | Show / Hide |
Range on Protein: 724-1009 Range on HMM: 1-231/231 Sequence Identity: 22% (65 aa) LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY--GSLRGFLRESRK .....|.| |||| |.. . ||.|..| .....| ..||. .||...|||... . | .. ||. |.|. .... .. YEILRKIGKGAFGKVYKCRHKK-----TGRIVAIKIIK--------EHIRREIQILKK-HHPNIVKLYDVFQD-DHLYMVMEYCDGDLGDLFDYIKKRGR VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIE |.. . .. . ....|| ....|. ... .|||| |||. | ||.||||.| . . .|| | HGLR------------------FPFPE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE--HIKICDFGLARQL---------TTFCGTPWYMAPE SLFDHIYTT-QSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK-----DLEKMM | |.. .|.||.|..|.| .. | |.| ....|.... |.|. .. .|.. .|.||| .. . . . VL---GYGKCKCDWWSCGCILYEMLC-GYPPFP--QMQMMFKKIG-----------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF |
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Kinase | RET.AA | Pkinase | 724-1005 | 20 | 1.3e-42 | 151.8 | Pfam | 1-293 (293) | Show / Hide |
Range on Protein: 724-1005 Range on HMM: 1-293/293 Sequence Identity: 20% (66 aa) LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLS--EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG----SLRGFL ...|...|.| ||.| .. . . .|||| . |......... .. | ..| .|||....||... .. . .. ||. | .| .. YHIGRKIGSGSFGCV-----YKCHHKGTGKIVAVKIIKKRHEKSWKDQTHRRLSEIQIMKRLNHPNIVRLYDWFEDKDHIYMVMEYCEGGLYVMDLFDYI RESRKVGPGYLGSGGSRNSSSLDHPDERAL--TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVA-EGRK---MKISDFGLSRDVYEEDSYVKRSQ . ..... .. .......|| .|..|. .|. .|||| |||. .| ||.||||.. .. . ... . ST----------------------WRHGCFYFSEWECKFYMYQILRGLEYCHSMGIIHRDLKPENILIDNNGHIDACVKICDFGLAKQFD-Y-NNS-MTT GRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI-------PPERLFNLLKTGHRMERPDNCS-------------------EEMYRL .|| | . . |.. .|.||.|..|.| .. | |.|| . ..... ... . ..| || ||. . FCGTPWYMAPEVIRGGQYYGPKVDMWSCGCILYEMLC-GRPPFPGHCWHDNHDQMQMICRIMGPPLHFDWPWWCSISYFFFRHWHFHWTFHNWSEECKDF MLQCWKQEPDKRPVFADISKD--L . |... | ||| ...| .. . IKWCLCKDPKKRPTAEQILQHPWF |
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Kinase | RET.AA | PDGFR | 724-820 | 44 | 8.3e-29 | 89.31 | In-house | 1-98 (358) | Show / Hide |
Range on Protein: 724-820 Range on HMM: 1-98/358 Sequence Identity: 44% (44 aa) LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR |..||||| | ||||| |||. | .|||||||. | || | || .. . .| .. | ||| || ..| || || | .|. | LQFGKTLGSGAFGKVVEATAYGLSKSQAVMKVAVKMLKPTAHSSEKEALMSELKIMSHLGQHMNIVNLLGACTHGGPIYIITEYCCYGDLLNYLHRKR |