Gene PDGFRa (Human)
PDGFRa
Sequence
Protein domains of PDGFRa.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
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IG | PDGFRa.AA | IG | 34-122 | 9 | 1.5e-05 | 25.64 | SMART | 1-58 (58) | Show / Hide |
Range on Protein: 34-122 Range on HMM: 1-58/58 Sequence Identity: 9% (9 aa) ENEKVVQLNSSFSLRCFGESEVSWQYPMSEEESSDVEIRNEENNSGLFVTVLEVSSASAAHT---GLYTCYYNHTQTEENELEG-RHIYIYVP .|.. .. .|.| . ...| |.. ....... | |.| . . .. ....| PP-VTVKEGETVTLTC-VS-QIWWY--------------------------LTI-NVQPEDSQQHGTYYCQAT-----HGQYWSIQGTTLTVQ |
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IGc2 | PDGFRa.AA | IGc2 | 40-107 | 13 | 0.000464 | 13.81 | SMART | 1-56 (56) | Show / Hide |
Range on Protein: 40-107 Range on HMM: 1-56/56 Sequence Identity: 13% (10 aa) QLNSSFSLRCF----GESEVSWQYPMSEEESSDVEIRNEENNSGLFVTVLEVSSASAAHTGLYTCYYNHTQT . |..|.|. . ...| . ... . |...... .. |.|||| . HEGQSVTLTCPATGNPDPNIHWYK---GQPLP-------------WNWTLTIKNVTPEDSGYYTCYARNPWG |
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IG | PDGFRa.AA | IG | 135-206 | 13 | 0.435916 | 0.4 | SMART | 1-58 (58) | Show / Hide |
Range on Protein: 135-206 Range on HMM: 1-58/58 Sequence Identity: 13% (11 aa) DYLVIVEDDDSAIIPCRTTDPETPVTLHNSEGVVPASYDSRQGFNGTFTV----------GPYICEATVKGKKFQ--TIPFNVY | | ... ..| . .... .|. | | |.|| .|.... .. |. PP-VTVKEGETVTLTC-VS----QIWWY-------------------LTINVQPEDSQQHGTYYCQAT-HGQYWSIQGTTLTVQ |
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IG | PDGFRa.AA | IG | 220-310 | 18 | 2.6e-09 | 38.18 | SMART | 1-58 (58) | Show / Hide |
Range on Protein: 220-310 Range on HMM: 1-58/58 Sequence Identity: 18% (18 aa) ALKTVYKSGETIVVTCAVFNNEVVDLQWTYPGEVKGKGITMLEEIKVPSIKLVYTLTVPEATVKDS---GDYECAARQATREVKEM-KKVTISVH .. | |||.. || | ..|. ||. .... || |.| |.|. .... . .|..|. PP-VTVKEGETVTLTC-VS-----QIWWY--------------------------LTI-NVQPEDSQQHGTYYCQAT---HGQYWSIQGTTLTVQ |
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IGc2 | PDGFRa.AA | IGc2 | 226-297 | 23 | 2e-06 | 28.73 | SMART | 1-56 (56) | Show / Hide |
Range on Protein: 226-297 Range on HMM: 1-56/56 Sequence Identity: 23% (17 aa) KSGETIVVTCAVFNNEVVDLQWTYPGEVKGKGITMLEEIKVPSIKLVYTLTVPEATVKDSGDYECAARQATR ..|.... || . .|.. . .|.. |. . |||. ..|. ||| |.| || . HEGQSVTLTCPATGNPDPNIHWYK-----GQPLP-----------WNWTLTIKNVTPEDSGYYTCYARNPWG |
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I-set | PDGFRa.AA | I-set | 273-293 | 42 | 0.125151 | 8.04 | Pfam | 58-78 (92) | Show / Hide |
Range on Protein: 273-293 Range on HMM: 58-78/92 Sequence Identity: 42% (9 aa) YTLTVPEATVKDSGDYECAAR ||||. ... |.| |.| |. YTLTISNVQPDDEGKYTCVAT |
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I-set | PDGFRa.AA | I-set | 337-399 | 26 | 4e-06 | 23.21 | Pfam | 22-80 (92) | Show / Hide |
Range on Protein: 337-399 Range on HMM: 22-80/92 Sequence Identity: 26% (17 aa) VEVRAYPPPRISWLKNNLTLIENLTEITTDVEKIQEIR-YRSKLKLIRAKEEDSGHYTIVAQNE ..|. .||| .||.|.. | . .| .... ....| ... .|.| ||.||.|. CQVTGDPPPQVSWFKDGQPLRP-----DSDRHQMTYDGDGTYTLTISNVQPDDEGKYTCVATNS |
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IG | PDGFRa.AA | IG | 322-414 | 14 | 0.000782 | 19.98 | SMART | 1-58 (58) | Show / Hide |
Range on Protein: 322-414 Range on HMM: 1-58/58 Sequence Identity: 14% (14 aa) SQLEAVNLHEVKHFVVEVRAYPPPRISWLKNNLTLIENLTEITTDVEKIQEIRYRSKLKLIRAKEEDS---GHYTIVAQNEDAVKSYTF--ELLTQVP .. |.. | . | .|.|. | . ....||| | |. .|. ..|. . .| PP-VTVKEGETVTLTC-VS-----QIWWY----------------------------LTI-NVQPEDSQQHGTYYCQAT----HGQYWSIQGTTLTVQ |
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IGc2 | PDGFRa.AA | IGc2 | 330-401 | 21 | 0.000851 | 11.29 | SMART | 1-56 (56) | Show / Hide |
Range on Protein: 330-401 Range on HMM: 1-56/56 Sequence Identity: 21% (16 aa) HEVKHFVVE--VRAYPPPRISWLKNNLTLIENLTEITTDVEKIQEIRYRSKLKLIRAKEEDSGHYTIVAQNEDA || .. . ....| | |.|.| . .. ... |.. ....||||.|| .|.|. HEGQSVTLTCPATGNPDPNIHWYK--GQPLP----------------WNWTLTIKNVTPEDSGYYTCYARNPWG |
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I-set | PDGFRa.AA | I-set | 435-447 | 38 | 0.274957 | 6.88 | Pfam | 22-34 (92) | Show / Hide |
Range on Protein: 435-447 Range on HMM: 22-34/92 Sequence Identity: 38% (5 aa) CTAEGTPLPDIEW |...|.| |...| CQVTGDPPPQVSW |
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Kinase | PDGFRa.AA | PDGFR | 593-950 | 69 | 2.8e-300 | 975.69 | In-house | 1-358 (358) | Show / Hide |
Range on Protein: 593-950 Range on HMM: 1-358/358 Sequence Identity: 69% (248 aa) LVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDS |..|..|||||||||||.||||||.||.|||||||||||||.||||.|||||||||.|||.|.||||||||||..||||||||||.||||.||||..|.| LQFGKTLGSGAFGKVVEATAYGLSKSQAVMKVAVKMLKPTAHSSEKEALMSELKIMSHLGQHMNIVNLLGACTHGGPIYIITEYCCYGDLLNYLHRKRHS FLSHHPEKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSDDNSEGLTL |..|||||||||.......|...|....|....||.||||||......||||||..|.|.||.|.||..|..|.|....|.....|||.|..|.|..||. FHQHHPEKPKKETWSNQQDPHNFSFYKNVHHHKENDGDYMDMSSCEDSQYVPMLMHKGVDKYVDMQRNNYMSPHSNYEDSYIEQDVKNELMEDDSNVLTY LDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLG |||.|.||||.||||||||||||||||||||||..||.|||||||||||||.|||||.||...|||||||||||||..|||.||||||||||||||||| WDLLCFSYQVAKGMEFLASKNCVHRDLAARNVLLCHGKVVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTTQSDVWSYGILLWEIFSLG GTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIV |.|||||.|||.||..||.|||||.|.||..|.||||.|||...|||||.|..|.... GNPYPGMPVDSKFYKMIKEGYRMAQPFHAPEEIYEIMQKCWDFDPEKRPTFQQLCQFL |
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Kinase | PDGFRa.AA | Pkinase_Tyr | 593-950 | 36 | 2.2e-157 | 533.65 | Pfam | 1-270 (270) | Show / Hide |
Range on Protein: 593-950 Range on HMM: 1-270/270 Sequence Identity: 36% (132 aa) LVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSE--KQALMSELKIMTHLGPHLNIVNLLGACT-KSGP--IYIITEYCFYGDLVNYLH ...|..||.||||.|..||..| . ... ..|||||||..| ... ....|.|.|||..|| | |||.|.|.|| ...| |||..||. .||| .||. ITFGKKLGEGAFGEVYKGTWKG-DPDNTKIPVAVKMLKEGAMHEQNCREDFMREAKIMKQLGHHPNIVRLYGVCTDQGEPNQIYIVMEYMPHGDLLDYLR KNRDSFLSHHPEKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSDDNS |.| .. KHR----------------------------------------------------------------------------------------------EDK EGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY-VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLW . ||. |||.. .|.|.|||.|.||||.||||||||.|.. ...||||||||||||..|..| ...|.. ||.||||||.|... .|| |||||.|.|.| QPLTMKDLLQMCWQIAKGMEYLESKNCIHRDLAARNCLVTENNVVKICDFGLARDIYNDDYYYRKRGGGKLPIKWMAPECINYGKFTTKSDVWSFGVLMW EIFSLGGTP-YPGMMVDSTFYNKI-KSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIV |||..|..| |||| .. .|..| ..||||..|.... |.|..| .||. .||.||.| . |. EIFTYGEQPTYPGM-SNEEVYEYIYEDGYRMPCPENCPDEIYDLMKQCWHYDPEDRPTFSEIHEQL |
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Kinase | PDGFRa.AA | TyrKc | 593-950 | 32 | 3.1e-143 | 483.06 | SMART | 1-280 (280) | Show / Hide |
Range on Protein: 593-950 Range on HMM: 1-280/280 Sequence Identity: 32% (128 aa) LVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG-PHLNIVNLLGACTKS-------GPIYIITEYCFYGDLVN ..||..||.||||.|..||.. ..|||||||. | ....|.|..||..|| | |||.|.|.||.. .|..|..||. .||| . ITLGKKLGEGAFGEVYKGTWK--------IQVAVKMLKEDA----REDFMREARIMCKLGGHHPNIVRLYGVCTQQGRNFMYIEPLMIVMEYMPHGDLKD YLHKNRDSFLSHHPEKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSD ||.|.|. YLRKHRPK-------------------------------------------------------------------------------------------- DNSEGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHD-------SNYVSK---GSTF-LPVKWMAPESIFDNLYT |.. ||||| .|.|.|||.|.||||.||||||||.|.. ...|||.||||.||| .| . |..| |. . ||..|||||.|... .| -----LCMKDLLSFCWQIACGMEYLHSKNCIHRDLAARNCLVGENHTVKISDFGLSRDIYDDDQQGESKDYYRKKEHKGGKTMLPIRWMAPECINYGKFT TLSDVWSYGILLWEIFSLGGTPYPGM----MVDSTFYNKIKSGYRMAKPDH--------ATSEVYEIMVKCWNSEPEKRPSFYHLSEIV | |||||.|...||||..|..||||| | .. ....|.|||| .|.. ...|.|.|| .||. .||.||.| . |. TKSDVWSFGVCMWEIFTYGQQPYPGMIQQMMSNQEVIEYVKQGYRMPQPPNDYPMSFVCCPDEMYQIMKQCWHEDPEDRPTFSEIHECF |
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Kinase | PDGFRa.AA | TK | 593-950 | 24 | 2.6e-127 | 429.14 | In-house | 1-486 (486) | Show / Hide |
Range on Protein: 593-950 Range on HMM: 1-486/486 Sequence Identity: 24% (133 aa) LVLGRVLGSGAFG---KVVEGTAYGLS--------------------RSQPVMKVAVKMLKPTARSSEKQALM----------------SELKIMTH-LG ..||..||.|.|| .| .|...|.. .. ...|||||||... .|... .. .|.|.| | || ITLGKKLGEGQFGSFGEVYKGEWRGRNPWNGKRFPCHMTVTLKCKNGKEGGKTPVAVKMLKEGDAMSQEEFFDEEMHDRDGGEDFLEEAEEMKMMCHSLG PHLNIVNLLGACTKS------------GPIYIITEYCFYGD----LVNYLHKNRDSFLS-----------------HHPEKPKKELDIFGLNPADESTRS | |||.|.|.||.. .|..|..||. .|| | .||.|.|. | ||. HHPNIVRLYGVCTQGEPKPCFEVVVHQEPWMIVMEYMPHGDMDGSLRDYLRKCRPKFQHEQDCPDNQHNKYPPSKLHHC--------------------- YVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSDDNSEGLTLLDLLS-------------------FTY | |.. | .| .. | . ...... |..| .. ||. |||. . . -------------------------M---KGD-----I---TY-SHESNSPC-PEEQDYDDDLIKDHPPPLTTKDLLQMAWQWCLTCKHQLTMHQLLMCW QVARGMEFLASK------NCVHRDLAARNVLLAQGKI-----------VKICDFG--------LARDIMHDSNYVSKG---------------------- |.|.|||.|.|| |.|||||||||.|...... .||.||| ||||| .|..|..|. QIACGMEYLHSKNCEFIQNFVHRDLAARNCLVGENNVCKWHFDGCGPVCKIADFGLSRQGSGVLARDIYSDDDYYRKSSYGTGRPMWPFEDDPWQDYYRQ --STFLPVKWMAPESIFDNL---------YTTLSDVWSYGILLWEIFSLGGTPYPGMMVD---------STFYNKIKSG--------------YRMAKPD .. ||..|||||...|. .|| |||||.|.|.||||..| .||.|.| . .......| .||..|. QSGGKLPIRWMAPECLNDRVFSEAEKYGKFTTKSDVWSFGVLMWEIFTYGQEPYYGGMSNQDVWKDGDNQEVMEYLRRGGRLCRSGLNEVGYRMRMPQPP HAT--------------SEVYEIMVKCWNSEPEKRPSFYHLSEIV |.. |.|..| .||. .||.||.| | | HCPDWMRYRMHPPHCPPEEYYDLMQQCWHYDPEDRPTFSQLHEQL |
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Kinase | PDGFRa.AA | TK-Unique | 593-950 | 34 | 2.9e-115 | 389.22 | In-house | 1-294 (294) | Show / Hide |
Range on Protein: 593-950 Range on HMM: 1-294/294 Sequence Identity: 34% (129 aa) LVLGRVLGSGAFGKVVEGTAYGLSRSQPVM-KVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG-PIYIITEYCFYGDLVNYLHKNR |..|.|.|.|||| | |.. |.. .. .||||||| |. .||....|...| .||.| |||..||.||||. | .|| ||| .|.| .||...| LEVGDVIGEGAFGQVWRGEVWGIWKHWDKQKCVAVKMLKDNATDTDKQDFLKEIQMMKELGDHPNIVQCLGCCTKSDEPWMIIMEYCPCGNLQHYLRTCR ------------DSFLSHHPEKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEV . . PAMRQHQTYGNLK------------------------------------------------------------------------------------FDF KNLLSDDNSEGLTLLDLLSFTYQVARGMEFLAS--KNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGS-TFLPVKWMAPESIF--DNLY- . .... | ... ||..| .|.|.|||.||| |..|||||.||||||. .|..||||||.|||.... |....| .|..||||||. .. | HHMPDKPRTEPISPKDLYHFAWQIACGMEYLASQRKKIVHRDLCARNVLLTEDKVCKICDFGMARDVYTNGVYSMMCSQGRIPIRWMAPESLKCYHGMYH TTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHA-TSEVYEIMVKCWNSEPEKRPSFYHLSEIV || |||||.|.|.||||.||..||||| .. . ..|. |||| .|.| . |.|..| ||..|||.|||| . . TTKSDVWSFGVLMWEIFTLGACPYPGMPWKD-IMECIRDGYRMPQPEHCCSHEMYNLMKSCWQWEPEERPSFRQIKHRL |
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Kinase | PDGFRa.AA | VEGFR | 790-950 | 62 | 2.6e-106 | 359.47 | In-house | 170-332 (332) | Show / Hide |
Range on Protein: 790-950 Range on HMM: 170-332/332 Sequence Identity: 62% (102 aa) LTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARD-IMHDSNYVSKGS-TFLPVKWMAPESIFDNLYTTLSDVWSYGILLWE ||. ||... .|||||||||||..|.||||||||.||. ..||||||||||. | | .|| ||. . || ||||||||||. ||| |||||||..||| LTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLCENNVVKICDFGLARHGIYKDPDYVRKGDQGRLPIKWMAPESIFDKVYTTYSDVWSYGVFLWE IFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIV |||||| |||| .| |.|..|.|||| .|| .| |.|.|| || ||| ||.| | |. IFSLGGSPYPGVQIDEEFCNRLKDGYRMRAPDYCTPEIYHIMLDCWHKEPEERPHFSELVEHL |
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Kinase | PDGFRa.AA | FGFR | 790-953 | 53 | 1.5e-85 | 290.55 | In-house | 133-293 (293) | Show / Hide |
Range on Protein: 790-953 Range on HMM: 133-293/293 Sequence Identity: 53% (88 aa) LTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIF || || |..||||||||.|||. |.|||||||||| . . ||||||||||| . | .. ||.||||||. ||. ||. |||||||.|||||. LTQKDLVSCAYQVARGMEYLASRKCIHRDLAARNVLVTDDYVMKICDFGLARDIHCIDYYRKTTNGRLPIKWMAPEALFDRVYTHQSDVWSYGVLLWEIM SLGGTPYPGMM-VDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVENL .||.|||. . | | |.|.|| || . ..|.| .| || .|. ||.| ..|| | TYGGQPYPHIPSVE-ELYKYLKEGHRMEKPHNCSQEIYHMMCQCWHFKPCQRPTF---KQLVEYL |
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Kinase | PDGFRa.AA | Src | 782-950 | 43 | 3.9e-74 | 251.27 | In-house | 85-255 (255) | Show / Hide |
Range on Protein: 782-950 Range on HMM: 85-255/255 Sequence Identity: 43% (75 aa) LS-DDNSEGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMH--DSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDV | |. | | .|.... |||.||..| |.| .|||||||||| .. ..|..|||||| .. | .|... .|.||.||| | . .|. ||| LKKDGEGRHLHLPQLIDMAAQVAEGMAYLESMNYIHRDLAARNVLVGENNVCKVADFGLAR-LIKEDDDEYCARHGAKFPIKWTAPEAINYGRFTIKSDV WSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYE-IMVKCWNSEPEKRPSFYHLSEIV ||.||||.||.. | .|||||. .. ... |||| .|.. |.|| || .||...||.|| | | . WSFGILLTEIVTYGRVPYPGMTNHEVL-QQVERGYRMPCPHNCPDELYEQIMLQCWHKDPEQRPTFEYLQWFL |
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Kinase | PDGFRa.AA | Ret | 794-952 | 49 | 6.7e-73 | 248.33 | In-house | 136-293 (293) | Show / Hide |
Range on Protein: 794-952 Range on HMM: 136-293/293 Sequence Identity: 49% (78 aa) DLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGG ...|| |. .|| .|.. |||||||||||.| |.| || |||| ||. | || . .||||||.|| .|. ||| |||||.|.|.||| .|. MIISFAWQICKGMHYLSEMKLVHRDLAARNVLVAEGRICKISDFGLTRDVYEDDSYVKRSKDRIPVKWMAIESLYDHVYTTKSDVWSFGVLCWEIVTMGA TPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVEN |||| . .. | |||| |. |.| || .|| ||.|||.| .| | NPYPGIPPE-RLWQLLKTGYRMDRPENCSEEMYRIMRQCWKQEPDKRPVFKFISKDFEK |
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Kinase | PDGFRa.AA | UTK | 790-950 | 36 | 1.5e-68 | 233.62 | In-house | 115-296 (296) | Show / Hide |
Range on Protein: 790-950 Range on HMM: 115-296/296 Sequence Identity: 36% (66 aa) LTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQG-------KIVKICDFG---LARDIMH--------DSNYVSK-GSTFLPVKWMAPESIFDN ||| ..|.. ...||||..|.|...|||||||||.|... ..||.||| ..|.. .|.|. . . . .|..|||||.. .. LTLHQRLCMAWDIARGMQYLHSCGFVHRDLAARNCLVHMHRMMWHCMMVCKIADFGRGGMSRRVNTFHFSNRYWESYYYMAQHQDRWPIRWMAPEALTHH -LYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSG-YRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIV .||.|||||.|...|||.. | .||||| . .. . . | |||..|.. .||..|..||...|..||.| | . . TRFTTKSDVWSFGVVCWEIWTWGRLPYPGMSNMQVWHQVCNGGRYRMPCPWDCPHPVYRLMHRCWHYDPQERPDFEDLVQQM |
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Kinase | PDGFRa.AA | Fer | 786-951 | 35 | 2.9e-64 | 217.74 | In-house | 103-283 (283) | Show / Hide |
Range on Protein: 786-951 Range on HMM: 103-283/283 Sequence Identity: 35% (64 aa) NSEG-LTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVK---ICDFGLARDIMHDSNYVSKG--STFLPVKWMAPESIFDNLYTTLSDVW |.. ... ... ..||.|.|||.| ||||.|||.||||.|. ..|..| | |||..|. . . ... .. .|..|.|||.. . .|.. .||| NKNKTVSDNEKIRMCYQAACGMEYLHSKNCIHRDIAARNCLYHKDKVKKKCKISDFGMSRQCSDYGYDYKMKEKACKVPIRWLAPETWQTGIYSPKTDVW SYGILLWEIFSLGGTPYPG----MMVDST----FYNKIKSGYRMAKPDHATSEVYEIMV-KCWNSEPEKRPSFYHLSEIVE |.|...||||. | .|||| | . . ..||.||.| |.|. .|...|| .||. .||.||.. .. .... SFGVMCWEIFTNGAEPYPGQPHGMKMTNVKKQARKWIIKKGYMMPMPNHMPPEIMQIMMKQCWQKDPEDRPTMKEICQKLK |
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Kinase | PDGFRa.AA | Tie | 787-950 | 48 | 3.2e-64 | 194.09 | In-house | 108-267 (267) | Show / Hide |
Range on Protein: 787-950 Range on HMM: 108-267/267 Sequence Identity: 48% (80 aa) SEGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLW . |. .| | |||||..|. |.|.||||||||.| .. . || ||||.| | || | |||.||| ||. ||| |||||||.||| ASTLSSQQILHFAADVARGMQYLSQKQCIHRDLAARNILVCENYVCKIADFGLSRG---DEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSYGVLLW EIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIV || ||||||| || . .|.|. |||| .| |||..| .|| | .||.| . . EIVSLGGTPYCGMTC-AELYEKLPQGYRMEQPRNCDDEVYDLMRQCWRDRPYERPPFAQIAVQL |
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Kinase | PDGFRa.AA | VEGFR | 593-719 | 44 | 8.9e-54 | 184.97 | In-house | 1-130 (332) | Show / Hide |
Range on Protein: 593-719 Range on HMM: 1-130/332 Sequence Identity: 44% (58 aa) LVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK---SGPIYIITEYCFYGDLVNYLHKN | ||..|| ||||.|.|..| |. .... |||||||..| .||. |||||||...|.| ||| ||.||.||| || .| ||| .| | ||| LKLGKMLGRGAFGQVHEASAFGIRKMETCTTVAVKMLKEGATASEHRALMSELKMLIHIGHHLNVVNFLGCCTKNIQKGPLMVIVEYCCFGNLSNYLRTK RDSFLSHHPEKPKKELDIFGLNPADESTRS |. | |. .. . .. |.|.. .. RMYFVPYPDKSPHMRQRKECMGPQDHQDHK |
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Kinase | PDGFRa.AA | Pkinase | 593-953 | 20 | 2e-41 | 147.56 | Pfam | 1-293 (293) | Show / Hide |
Range on Protein: 593-953 Range on HMM: 1-293/293 Sequence Identity: 20% (84 aa) LVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQ--ALM-SELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYG----DLVNY ...||..|||.||.| ... | .. .|||| .| ..|.|. .. ||..|| .| | ||| |..... .. ||...||| | || | YHIGRKIGSGSFGCVYKCHHKGTGK-----IVAVKIIKKRHEKSWKDQTHRRLSEIQIMKRL-NHPNIVRLYDWFEDKDHIYMVMEYCEGGLYVMDLFDY LHKNRDSFLSHHPEKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSDD .. . IST------------------------------------------------------------------------------------------------W NSEGL--TLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA-QGKI---VKICDFGLARD--IMHDSNYVSKGSTFLPVKWMAPESIF-DNLYTTLS .. .. . .. .. ||..||.|.. |....|||| |.|. .| | |||||||||. . ..| . . | .|||| | .. |.. . RHGCFYFSEWECKFYMYQILRGLEYCHSMGIIHRDLKPENILIDNNGHIDACVKICDFGLAKQFDY-NNS-MTTFCGTPW---YMAPEVIRGGQYYGPKV DVWSYGILLWEIFSLGGTPYPGM------MVDSTFYNKIKSGYRMAKPDHAT-------------------SEVYEIMVKCWNSEPEKRPSFYHLSEIVE |.||.|..|.| .. | .|.|| . .... . .. | . .| ... .|.. |.|||. .|.. DMWSCGCILYEMLC-GRPPFPGHCWHDNHDQMQMICRIMGPPLHFDWPWWCSISYFFFRHWHFHWTFHNWSEECKDFIKWCLCKDPKKRPT---AEQILQ N--L . HPWF |
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Kinase | PDGFRa.AA | FGFR | 593-690 | 43 | 4.7e-35 | 116.9 | In-house | 1-100 (293) | Show / Hide |
Range on Protein: 593-690 Range on HMM: 1-100/293 Sequence Identity: 43% (43 aa) LVLGRVLGSGAFGKVVEGTAYGLSRS--QPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNR |.|| .|| |.||.|. ..| |. .. . ..||||||| . . | ||. .| | | ||.||||.|| || |.| ||| | | .| ..| LTLGKMLGEGCFGQVWMAEAKGIDCDRPEKEITVAVKMLKMNHTDKDLSDLVSEMEMMKMIGKHKNIINLLGCCTQEGPLYVIVEYCHHGNLRDFLRARR |
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Kinase | PDGFRa.AA | Ret | 593-690 | 38 | 6.6e-26 | 85.44 | In-house | 1-100 (293) | Show / Hide |
Range on Protein: 593-690 Range on HMM: 1-100/293 Sequence Identity: 38% (39 aa) LVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT-ARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG--PIYIITEYCFYGDLVNYLHKN |.|. .|| | ||.|| ..| . ||||||| | ||| .| ||. . . | ... |.|||. .. | .| ||| || | .| . LQLDDTLGEGHFGQVVKAQAFHIRGHPGYTTVAVKMLKRNTANSSEYHDLLSEFQLLKQVN-HPHVIKLYGACIQDDPFPTCLIVEYCKYGCLREFLRLS R | R |
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Kinase | PDGFRa.AA | Tie | 602-690 | 38 | 1.5e-25 | 74.15 | In-house | 2-87 (267) | Show / Hide |
Range on Protein: 602-690 Range on HMM: 2-87/267 Sequence Identity: 38% (34 aa) GAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNR | ||.|. . . . .|.||.||.| | ... | || .| .| | ||.||.||| . | .|. .|| || |...| | | GNFGQVMKAM---IKKDGLKMEVAIKMMKEYASEDDHRDFMGELEVMCKVGHHPNIINLVGACEHRGYLYVAIEYAPYGNLLDFLRKSR |
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Kinase | PDGFRa.AA | S_TKc | 593-949 | 16 | 1.3e-22 | 82.37 | SMART | 1-231 (231) | Show / Hide |
Range on Protein: 593-949 Range on HMM: 1-231/231 Sequence Identity: 16% (62 aa) LVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDS ..|..|.|||||| .. . .||.|..| YEILRKIGKGAFGKVYKCRHKK-----TGRIVAIKIIK-------------------------------------------------------------- FLSHHPEKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYS-------DIQRSLYDRPASYKKKSM----LDS---EV |.|.. . . . .| .. | .| .. ----------------------------------------------------EHIRREIQILKKHHPNIVKLYDVFQD-----DHLYMVMEYCDGDLGDL KNLLSDDNSEG----LTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTT . .. . ...| .. . ...||.....|.. |.. .|||| |.|| . .||||||||| . . .|||| . |.. FDYIKKRGRHGLRFPFPE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE--HIKICDFGLARQL---------TTFCGTPWYMAPEVL---GYGK -LSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSE----------I .|.|| |..|.| .. | .|.| . . ..||. ..|. ... ||.. .|||||. . . . CKCDWWSCGCILYEMLC-GYPPFP---QMQMMFKKIG-----------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF |
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Kinase | PDGFRa.AA | UTK | 593-693 | 34 | 7.4e-21 | 68.08 | In-house | 1-108 (296) | Show / Hide |
Range on Protein: 593-693 Range on HMM: 1-108/296 Sequence Identity: 34% (37 aa) LVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQA----LMSELK---IMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNY . ||| ||.|||| | .... | ..|.|||| ....| . ... .| | . .| .. | |...|.| ||...|..|.|||. |||..| VQLGRQLGQGAFGEVHKARFTQCSEHMYEMDVAVKVCQHHADAQQEPEPYPDFMEEARELQMMKQFHWHPNVLRLVGVCTQEEPWMIVTEYMENGDLRSY LHKNRDSF | ..|... LRRHRPTP |
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Kinase | PDGFRa.AA | Src | 593-691 | 39 | 1.3e-19 | 63.23 | In-house | 1-90 (255) | Show / Hide |
Range on Protein: 593-691 Range on HMM: 1-90/255 Sequence Identity: 39% (39 aa) LVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRD . | | ||.| || | .|. | .||||| ||| . .|. | .||. | | ..|.|. |.. ||||.||| | | ||.|... IKLCRKLGQGQFGEVWMGYWNG------NTKVAVKTLKPGT--MSPEAFLQEAQIMKKLR-HEKLVQLYAVCSQEEPIYIVTEYMSHGSLLDYLKKDGE |
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Kinase | PDGFRa.AA | Fer | 593-691 | 33 | 7.9e-16 | 50.49 | In-house | 1-105 (283) | Show / Hide |
Range on Protein: 593-691 Range on HMM: 1-105/283 Sequence Identity: 33% (35 aa) LVLGRVLGSGAFGKVVEG----TAYGLSRSQ-PVMKVAVKMLKPTARSSE-KQALMSELKIMTH-LGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNY .|| .||.||||.| | . . ... . .|.||..| .. . | .. .| | .|| . | |.| . | |. ||.|. |.| |.| .| VTLGKKLGEGAFGEVYKGRRTLKCKKGKWHVVNKVAVKVKKCKCEDATKEQIKEFMHEARIMRNNYD-HPNVVKFYGVCVDEQPIMIVMEFCNGGSLDSY LHKNRD | || . LKKNKN |