Gene Y119C1B.8 (Nematode worm)

Y119C1B.8

Species: Nematode worm
Alias: Y119C1B.8, aSWK443, CE25214
External Links: Wormbase Link ,
Annotation: WormBase Genetic Map location: I:-0.98, WormBase Physical Map location: I: 4534801-4526428

Classification

Group: Atypical
Family: BRD

Sequence

Name Sequence Type Origin Length Description Download
Y119C1B.8.AA Protein Genbank 851 None Fasta, JSON

Protein domain

Protein domains of Y119C1B.8.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
BROMO Y119C1B.8.AA BROMO 37-147 27 8.3e-33 116.23 SMART 1-118 (118) Show / Hide 
Range on Protein: 37-147
Range on HMM: 1-118/118
Sequence Identity: 27% (33 aa)

PTRHTNKLDYIMTTVLKEAGKH--------KHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDDIETVFQNCYTFNGKEDDVT
. .  .|.  .. .|...  .|        .. |||..|||.. | .| |.. . .|||||||...|.. .|. ..| .||.. .|.||.|.|... .| 
DPK-QKKCQELLKEVMCHKHDHGDPMNRGRPYAWPFMQPVDRKELNYPDYYDIIKNPMDLKTIKKKLENHQYQSMEEFVDDFMLMFNNCMTYNEPDSEVY

IMAQNVHEVIKKSLEQAPR
 ||.  ... .. ....|.
KMAKKLQKFFEEKWREFPP
Bromodomain Y119C1B.8.AA Bromodomain 48-133 29 3.1e-24 81.38 Pfam 1-89 (89) Show / Hide 
Range on Protein: 48-133
Range on HMM: 1-89/89
Sequence Identity: 29% (26 aa)

MTTVLK--EAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYT-CAQECIDDIETVFQNCYTFNGKEDDVTIMAQN
. ....  .  .|.  .||..||| .   .| |.... .||||.||...||. .|.   .| . |.| ...||.|.||.....  .|. 
CDQIMDMKYIMEHPICEPFWHPVDPDRDEYPDYYDIIKHPMDLSTIQQKLKNNKYRNNIAEFWHDMELMWHNCMTYNGPDSPIYKDARK
BROMO Y119C1B.8.AA BROMO 259-368 33 5.7e-37 130.05 SMART 1-118 (118) Show / Hide 
Range on Protein: 259-368
Range on HMM: 1-118/118
Sequence Identity: 33% (40 aa)

LLPSMKPCLKLLNDFSTKKYQE---------FAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCFLYNPVGDPVH
  . .|.| .||. .  .| .          .|||| .|||. .|...||..|||.||||| .| |.|.. |. . .|..|..||. ||. ||. . .|.
DPK-QKKCQELLKEVMCHKHDHGDPMNRGRPYAWPFMQPVDRKELNYPDYYDIIKNPMDLKTIKKKLENHQYQSMEEFVDDFMLMFNNCMTYNEPDSEVY

SFGLRFQEVFDRRWAELGD
... . |..| ..|.|. .
KMAKKLQKFFEEKWREFPP
Bromodomain Y119C1B.8.AA Bromodomain 266-354 29 4.8e-26 87.28 Pfam 1-89 (89) Show / Hide 
Range on Protein: 266-354
Range on HMM: 1-89/89
Sequence Identity: 29% (27 aa)

CLKLLN--DFSTKKYQEFAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYK-EPSDFEHDVRLMLRNCFLYNPVGDPVHSFGLR
|.....  ......   ...|| .||| .  .. ||..|||.||||. ...|.... |.  . .|.||..||..||  ||. ..|..    .
CDQIMDMKYIMEHP---ICEPFWHPVDPDRDEYPDYYDIIKHPMDLSTIQQKLKNNKYRNNIAEFWHDMELMWHNCMTYNGPDSPIYKDARK