Gene K09C6.8 (Nematode worm)

K09C6.8

Species: Nematode worm
Alias: K09C6.8, aSWK264, CE12002
External Links: Wormbase Link ,
Annotation: WormBase Physical Map location: V: 843027-840043, WormBase Genetic Map location: V:-19.08,

Classification

Group: Other
Family: Worm2

Sequence

Name Sequence Type Origin Length Description Download
K09C6.8.kin_dom Protein Kinase Domain Sugen global kinase HMM prediction 243 Kinase domain by global Sugen HMM Fasta, JSON
K09C6.8.AA Protein Genbank 449 None Fasta, JSON

Protein domain

Protein domains of K09C6.8.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase K09C6.8.AA Worm2 100-341 90 8.9e-212 707.23 In-house 1-242 (242) Show / Hide 
Range on Protein: 100-341
Range on HMM: 1-242/242
Sequence Identity: 90% (220 aa)

FKHISKGTKVMLGNFPMTPKDDVIGNMGMVVCRYLALNQYHQTIYHFHFRAAINFDSAGSKEAQILSKLNMNRSHNAMRVMRYGQYLNLQYILTQEVGYL
||||||.|||||||.||..|||||||||.||||||||||||||.||||.||.||||||||||||||.||||||||||||||||||||||||||||.||||
FKHISKETKVMLGNMPMFCKDDVIGNMGRVVCRYLALNQYHQTFYHFHYRATINFDSAGSKEAQILCKLNMNRSHNAMRVMRYGQYLNLQYILTQQVGYL

LSSDLGFIVQNTKLDLYSAVHLIQQTFYCISDLHKIGYTHLDIRPSSFSLLRNNKAVVVLNNFFNSETRQNISRNIRTTKHNGLQPLYVQQSRHARNKSE
|..||||||||| |||||.|||||||||||||||||.|.|||||||||||||||||.|||||||||||||||.|||.|||||||||||||| ||||||||
LHWDLGFIVQNTTLDLYSSVHLIQQTFYCISDLHKICYHHLDIRPSSFSLLRNNKAIVVLNNFFNSETRQNIRRNICTTKHNGLQPLYVQQARHARNKSE

REPLSKNVINTYLSRRQHFRLARGPADDYESWFYICARFITL
|||| |||||||.|||||||||||||||||||||||||||||
REPLPKNVINTYMSRRQHFRLARGPADDYESWFYICARFITL
Kinase K09C6.8.AA Dual 224-248 48 1.2e-05 14.82 In-house 121-145 (282) Show / Hide 
Range on Protein: 224-248
Range on HMM: 121-145/282
Sequence Identity: 48% (12 aa)

QTFYCISDLHKIGYTHLDIRPSSFS
|.   | ||| ||| | .| |..|.
QMLRAIQDLHSIGYLHRNIKPANFH
Kinase K09C6.8.AA TTBKL 160-245 18 0.000119 11.71 In-house 46-131 (288) Show / Hide 
Range on Protein: 160-245
Range on HMM: 46-131/288
Sequence Identity: 18% (17 aa)

KEAQILSKLNMNRSHNAMRVMRYGQYLNLQYILTQEVGYLLSSDLGFIV--QNTK--LDLYSAVHLIQQTFYCISDLHKIGYTHLDIRPS
.|...|.||..| |  . ... .|.. . ...  .    |.. .|. .    ..|  .   ... .  |..|.. ..| .|. | |. |.
MEVHVLMKLQPNGSPHFPKCHCSGKRKDYNFMVMT----LCGPNLQDLRKMMPNKKRFSDGTWSRIGIQCLYALKQMHDCGFIHRDVKPC