Gene C35D10.4 (Nematode worm)

C35D10.4

Species: Nematode worm
Alias: C35D10.4ABC-like, C35D10.4, aSWK431, CE01198, YLC4_CAEEL
External Links: Wormbase Link ,
Annotation: WormBase Genetic Map location: III:-2.51, WormBase Physical Map location: III: 4858925-4862449,

Classification

Group: Atypical
Family: ABC1
Subfamily: ABC1-A

Sequence

Name Sequence Type Origin Length Description Download
C35D10.4.kin_dom Protein Kinase Domain Sugen global kinase HMM prediction 216 Kinase domain by global Sugen HMM Fasta, JSON
C35D10.4.AA Protein Genbank 733 None Fasta, JSON

Protein domain

Protein domains of C35D10.4.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase C35D10.4.AA ABC1-A 408-608 61 3.4e-165 555.1 In-house 1-216 (216) Show / Hide 
Range on Protein: 408-608
Range on HMM: 1-216/216
Sequence Identity: 61% (133 aa)

FDDKPFACASIGQVHKAVLKDGRNVAVKVQYPGVAEGIDSDIDNLVSVLSVGGIFPKGMFLDAFVGVARRELKQECDYEREARAMKKFRELIADWQDVYV
| ..|||||||||||.|||||||.||||.|||||||.|||||.||..|....|.||||||||.|...|||||..||||.||||.|.|||.|..||...||
FEEMPFACASIGQVHQAVLKDGREVAVKIQYPGVAESIDSDINNLMMVMNMSGMFPKGMFLDHFIDYARRELHWECDYQREARCMQKFRQLLKDWPFFYV

PEVIDELSSSRVLTTELVYGKPVDACVEEPQVVRDYIAGKFIELCLK---------------EIFLWRFMQTDPNWSNFFLGKHPKTGEPRLVLLDFGAS
|.||||....||||.||.||.|.|.|....|..|.||......|||.               |||.||||||||||.|||..||||||.....|||||||
PHVIDEYCTDRVLTMELMYGFPIDQCQGLSQEIRNYICYNIMRLCLREVEYIFLSTFIIIDFEIFEWRFMQTDPNWANFFYDKHPKTGQHKVELLDFGAS

RAYGKKFVDIYMNIIK
|.|||.|.|.||.|||
REYGKDFTDHYMQIIK
Kinase C35D10.4.AA ABC1 395-511 45 2.4e-66 226.75 In-house 1-123 (123) Show / Hide 
Range on Protein: 395-511
Range on HMM: 1-123/123
Sequence Identity: 45% (56 aa)

DAFGDDWREKFEHFDDKPFACASIGQVHKAVLKDGRNVAVKVQYPGVAEGIDSDIDNLVSVLSVGGIFPKG-----MFLDAFVGVARRELKQECDYEREA
   |  | . |. ||.||||.|||.|||.|.||||..||||||.|||.| |..||.|.  |......|..|     .||. || ....||..|||...||
QDLG-NWEDVFSEFDEKPFAAASIAQVHRAKLKDGQTVAVKVQHPGVREQIHYDINNMEMVVKMCDWFFPGPDFKWFFLMWFVDEFQKELPWECDFNNEA

RAMKKFRELIA--DWQDVYVPEVI
|...|.|.|..  .|...|||...
RNAEKCRQLFKKFHWPFFYVPRIH
Kinase C35D10.4.AA ABC1 395-511 42 8.3e-61 206.73 Pfam 1-126 (126) Show / Hide 
Range on Protein: 395-511
Range on HMM: 1-126/126
Sequence Identity: 42% (53 aa)

DAFGDDWREKFEHFDDKPFACASIGQVHKAVLKD-GRNVAVKVQYPGVAEGIDSDIDNLVSVLSVGGIFPKG-----MFLDAFVGVARRELKQECDYERE
 ..|..|.|.|..||..|.|.|||.|||.|.||| |. ||||||.|||.. ...||.|.  .. .   |..|     ..|.. | ..|..|..|.||.||
EELGCPWEEIFQEFDEEPIAAASIAQVHRARLKDDGEEVAVKVQHPGVKKRMMRDIYNMRWMAKWVKRFFPGYRRQRFDLMWIVDEFRKNLPWELDYRRE

ARAMKKFRELIADW---QDVYVPEVI
|..|..|||....|   ..||||.|.
AKNMERFRENFRHWHRQPWVYVPKVY
Kinase C35D10.4.AA ABC1-B 395-511 32 1.9e-20 71.33 In-house 1-125 (125) Show / Hide 
Range on Protein: 395-511
Range on HMM: 1-125/125
Sequence Identity: 32% (41 aa)

DAFGDDWREKFEHFDDKPFACASIGQVHKAVLKDGRNVAVKVQYPGVAEGIDSDIDNLVSVLSVGGI-FP-----KGMFLDAFVGVARRELKQECDYERE
   |    . |. ||.|| | ||. |||.|.|.||. ||||||.| . . .. |.  .  .. |.   ||     |   . .|.  .   | || | . |
KDLG-NIEDVFSEFDQKPIAAASLAQVHRAKLHDGETVAVKVQHPWLRKQFHYDMMMMELFVKVCDWFFPKSPDFKEFPFMWFHDEIQKNLPQELDFYNE

ARAMKKFRELIA---DWQDVYVPEVI
||  .| |.. .   .   .||| ..
ARNAEKCRQMFKKFKHFDFLYVPRIH