Gene PDGFRb (Mouse)
PDGFRb
Sequence
Protein domains of PDGFRb.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
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IGc2 | PDGFRb.AA | IGc2 | 44-106 | 23 | 1.6e-05 | 25.61 | SMART | 1-56 (56) | Show / Hide |
Range on Protein: 44-106 Range on HMM: 1-56/56 Sequence Identity: 23% (16 aa) NISSTFVLTCS----GSAPVMWEQMSQVPWQEAAMNQDGTFSSVLTLTNVTGGDTGEYFCVYNNSLG .. ...||| . ..| ...| .. ||..||| .| |.| |. |. | HEGQSVTLTCPATGNPDPNIHWYKGQPLP-----------WNWTLTIKNVTPEDSGYYTCYARNPWG |
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IG | PDGFRb.AA | IG | 38-120 | 18 | 0.000143 | 22.43 | SMART | 1-58 (58) | Show / Hide |
Range on Protein: 38-120 Range on HMM: 1-58/58 Sequence Identity: 18% (16 aa) GPEFVLNISSTFVLTCSGSAPVMWEQMSQVPWQEAAMNQDGTFSSVLTLTNVTGGDT---GEYFCVYNNSLGPELSERK--RIYIFVP | . . .| .||| | . | ||. ||. |. |.|.|. . . . ... | PP-VTVKEGETVTLTC-VS-QIWWY---------------------LTI-NVQPEDSQQHGTYYCQAT-----HGQYWSIQGTTLTVQ |
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V-set | PDGFRb.AA | V-set | 84-119 | 27 | 0.388182 | 5.75 | Pfam | 95-128 (128) | Show / Hide |
Range on Protein: 84-119 Range on HMM: 95-128/128 Sequence Identity: 27% (10 aa) LTLTNVTGGDTGEYFCVYNNSLGPELSERKRIYIFV ||..|.. |.| |.|. |. .|.. . . | LTISNLQPSDSGTYYCAVWNC--NEDYFGHGTRLTV |
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IGc2 | PDGFRb.AA | IGc2 | 225-297 | 23 | 1.5e-14 | 55.61 | SMART | 1-56 (56) | Show / Hide |
Range on Protein: 225-297 Range on HMM: 1-56/56 Sequence Identity: 23% (17 aa) RQGESITIRCIVMGNDVVNFQWTYPRMKSGRLVEPVTDYLFGVPSRIGSILHIPTAELSDSGTYTCNVSVSVN ..|.|.|..|.. ||.. |..|.. . .| .. |.| ....|||.||| .. ... HEGQSVTLTCPATGNPDPNIHWYK----GQPLP-------------WNWTLTIKNVTPEDSGYYTCYARNPWG |
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IG | PDGFRb.AA | IG | 219-310 | 18 | 9.6e-11 | 42.94 | SMART | 1-58 (58) | Show / Hide |
Range on Protein: 219-310 Range on HMM: 1-58/58 Sequence Identity: 18% (18 aa) AVQTVVRQGESITIRCIVMGNDVVNFQWTYPRMKSGRLVEPVTDYLFGVPSRIGSILHIPTAELSDS---GTYTCNVSVSVNDHGDEKA---INISVI ..|. ||..|..| | ...|. |.| ....|| |||.| .. ||. .. ....| PP-VTVKEGETVTLTC-VS-----QIWWY---------------------------LTI-NVQPEDSQQHGTYYCQAT-----HGQYWSIQGTTLTVQ |
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V-set | PDGFRb.AA | V-set | 212-309 | 16 | 7e-06 | 22.12 | Pfam | 1-128 (128) | Show / Hide |
Range on Protein: 212-309 Range on HMM: 1-128/128 Sequence Identity: 16% (21 aa) SINVSV-NAV----QTVVRQGESITIRCIVM-GN----DVVNFQWTY-PRM--------KSGRLVEPVTDYLFGVPSRIGSI------------LHIPTA .. |.. . .| .|.|.|..| .. . .. ..| . . .. . ..... |. |.. |.| . QSQVTQHPPRGCPWWVTVQEGQSVTLPCHYSDDYTCWEHNFYIYWYRQQPPGQKPQWIISYYTHYYYNFGHGYYYPRFKGRVTFSGNPSKNDFSLTISNL ELSDSGTYTCNVSVSVNDHGDEKAINISV ..||||||.| |. . | .. .. .. | QPSDSGTYYCAVWNC-NEDYFGHGTRLTV |
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IGc2 | PDGFRb.AA | IGc2 | 330-402 | 17 | 0.004866 | 4.04 | SMART | 1-56 (56) | Show / Hide |
Range on Protein: 330-402 Range on HMM: 1-56/56 Sequence Identity: 17% (13 aa) HRSRTLRVVFE--AYPMPSVLWLKDNRTLGDSGAGELVLSTRNMSETRYVSELILVRVKVSEAGYYTMRAFHEDD | .... . ..| |.. |.| . | . ..| . .|... .|||| .| .. HEGQSVTLTCPATGNPDPNIHWYK-GQPLP------------------WNWTLTIKNVTPEDSGYYTCYARNPWG |
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IG | PDGFRb.AA | IG | 324-413 | 9 | 0.021636 | 11.71 | SMART | 1-58 (58) | Show / Hide |
Range on Protein: 324-413 Range on HMM: 1-58/58 Sequence Identity: 9% (9 aa) VEIAELHRSRTLRVVFEAYPMPSVLWLKDNRTLGDSGAGELVLSTRNMSETRYVSELILVRVKVSEA---GYYTMRAFHEDDEVQL--SFKLQVN . . . |.. . .. |. |.. .|... . | |. .| ... ...|.| PP-VTVKEGETVTLTC-VS---QIWWY-----------------------------LTI-NVQPEDSQQHGTYYCQAT--HGQYWSIQGTTLTVQ |
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Kinase | PDGFRb.AA | PDGFR | 599-957 | 65 | 2.7e-292 | 949.61 | In-house | 1-358 (358) | Show / Hide |
Range on Protein: 599-957 Range on HMM: 1-358/358 Sequence Identity: 65% (237 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHT |..|.||||||||.||||||.|||.|||.|||||||||.||.||||.|||||||||||||.|.|.||||||||.|||||||||||.||||..||||..|. LQFGKTLGSGAFGKVVEATAYGLSKSQAVMKVAVKMLKPTAHSSEKEALMSELKIMSHLGQHMNIVNLLGACTHGGPIYIITEYCCYGDLLNYLHRKRHS FLQRHSNKHCPPSAELYSNAL-PVGFSLPSHLNLTGESDGGYMDMSKDESIDYVPMLDMKGDIKYADIESPSYMAPYDNYVPSAPERTYRATLIND-SPV |.|.|..| |..|..||.. |..||.........|.||.|||||..|...|||||..||..||.|.....||.|..||..|..|......|..| |.| FHQHHPEK---PKKETWSNQQDPHNFSFYKNVHHHKENDGDYMDMSSCEDSQYVPMLMHKGVDKYVDMQRNNYMSPHSNYEDSYIEQDVKNELMEDDSNV LSYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIF |.|.||..||||||.||.||||||||||||||||||.|.||.|||||||||||||.||||..||...||.|||||||||...|||.|||||.|||||||| LTYWDLLCFSYQVAKGMEFLASKNCVHRDLAARNVLLCHGKVVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTTQSDVWSYGILLWEIF TLGGTPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLL .|||.|||..|....||..||.|||||||.||..||||||||||....|.||.|.||...| SLGGNPYPGMPVDSKFYKMIKEGYRMAQPFHAPEEIYEIMQKCWDFDPEKRPTFQQLCQFL |
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Kinase | PDGFRb.AA | Pkinase_Tyr | 599-957 | 35 | 2e-153 | 520.27 | Pfam | 1-270 (270) | Show / Hide |
Range on Protein: 599-957 Range on HMM: 1-270/270 Sequence Identity: 35% (132 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSE--KQALMSELKIMSHLGPHLNVVNLLGACT-KGGP--IYIITEYCRYGDLVDYLH ...|..||.||||.|...|..| .... ...||||||| .| ... ....|.|.|||..|| | |.|.|.|.|| .|.| |||..||. .||| |||. ITFGKKLGEGAFGEVYKGTWKG-DPDNTKIPVAVKMLKEGAMHEQNCREDFMREAKIMKQLGHHPNIVRLYGVCTDQGEPNQIYIVMEYMPHGDLLDYLR RNKHTFLQRHSNKHCPPSAELYSNALPVGFSLPSHLNLTGESDGGYMDMSKDESIDYVPMLDMKGDIKYADIESPSYMAPYDNYVPSAPERTYRATLIND ... .| KHR-----------------------------------------------------------------------------------------------ED SPVLSYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY-ISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILL . |. ||.....|.|.||..|.||||.||||||||.|. |.. ||||||||||||. |..| ..|.. || ||||||.|... .|| |||||||.|. KQPLTMKDLLQMCWQIAKGMEYLESKNCIHRDLAARNCLVTENNVVKICDFGLARDIYNDDYYYRKRGGGKLPIKWMAPECINYGKFTTKSDVWSFGVLM WEIFTLGGTP-YPELPMNDQFYNAI-KRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLL |||||.|..| ||.. | ..|..| ..||||..| ...||||..|..||... | || ||... | WEIFTYGEQPTYPGM-SNEEVYEYIYEDGYRMPCPENCPDEIYDLMKQCWHYDPEDRPTFSEIHEQL |
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Kinase | PDGFRb.AA | TyrKc | 599-957 | 32 | 3.4e-138 | 466.3 | SMART | 1-280 (280) | Show / Hide |
Range on Protein: 599-957 Range on HMM: 1-280/280 Sequence Identity: 32% (125 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLG-PHLNVVNLLGACTKG-------GPIYIITEYCRYGDLVD ..||..||.||||.|...|. ..|||||||. | ....|.|..||..|| | |.|.|.|.||.. .|..|..||. .||| | ITLGKKLGEGAFGEVYKGTWK--------IQVAVKMLKEDA----REDFMREARIMCKLGGHHPNIVRLYGVCTQQGRNFMYIEPLMIVMEYMPHGDLKD YLHRNKHTFLQRHSNKHCPPSAELYSNALPVGFSLPSHLNLTGESDGGYMDMSKDESIDYVPMLDMKGDIKYADIESPSYMAPYDNYVPSAPERTYRATL ||...... YLRKHRPK-------------------------------------------------------------------------------------------- INDSPVLSYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRD------SNYISK----GSTF-LPLKWMAPESIFNSLY |. ||. |..|.|.||..|.||||.||||||||.|. |.. |||.||||.||| | . |..| |. . ||..|||||.|. . . ------LCMKDLLSFCWQIACGMEYLHSKNCIHRDLAARNCLVGENHTVKISDFGLSRDIYDDDQQGESKDYYRKKEHKGGKTMLPIRWMAPECINYGKF TTLSDVWSFGILLWEIFTLGGTPYPEL----PMNDQFYNAIKRGYRMAQPAH--------ASDEIYEIMQKCWEEKFETRPPFSQLVLLL || |||||||...|||||.|..|||. |.. .. .|.|||| ||.. ..||.|.||..||.|. | || ||... .. TTKSDVWSFGVCMWEIFTYGQQPYPGMIQQMMSNQEVIEYVKQGYRMPQPPNDYPMSFVCCPDEMYQIMKQCWHEDPEDRPTFSEIHECF |
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Kinase | PDGFRb.AA | TK | 599-957 | 26 | 1.7e-126 | 426.35 | In-house | 1-486 (486) | Show / Hide |
Range on Protein: 599-957 Range on HMM: 1-486/486 Sequence Identity: 26% (139 aa) LVLGRTLGSGAFG---QVVEATAHGLS--------------------HSQATMKVAVKMLKSTARSSEKQALM----------------SELKIMSH-LG ..||..||.|.|| .| .....|.. .......|||||||... .|... .. .|.|.|.| || ITLGKKLGEGQFGSFGEVYKGEWRGRNPWNGKRFPCHMTVTLKCKNGKEGGKTPVAVKMLKEGDAMSQEEFFDEEMHDRDGGEDFLEEAEEMKMMCHSLG PHLNVVNLLGACTKG------------GPIYIITEYCRYGD----LVDYLHRNKHTFLQRHSNKHCPPSAELYSNALPVGFSLPSHLNLTGESDGGYMDM | |.|.|.|.||.| .|..|..||. .|| | |||......| . .... .. ...|. | | .. HHPNIVRLYGVCTQGEPKPCFEVVVHQEPWMIVMEYMPHGDMDGSLRDYLRKCRPKFQHEQDCPDNQHNKYPPSK-L--------H--HC---------- SKDESIDYVPMLDMKGDIKYADIESPSYMAPYDNYVPSAPERTYRATLIND-SPVLSYTDLVG-------------------FSYQVANGMDFLASK--- | ||| | .| ...|.. ..|..| .|| | .| |. .||. ...|.|.|| .|.|| ----------M---KGD-----I---TY-SHESNSPC-PEEQDYDDDLIKDHPPPLTTKDLLQMAWQWCLTCKHQLTMHQLLMCWQIACGMEYLHSKNCE ---NCVHRDLAARNVLICEGKL-----------VKICDFG--------LARDIMRDSNYISKG------------------------STFLPLKWMAPES |.|||||||||.|..|.. .||.||| ||||| .|..| .|. .. ||..|||||. FIQNFVHRDLAARNCLVGENNVCKWHFDGCGPVCKIADFGLSRQGSGVLARDIYSDDDYYRKSSYGTGRPMWPFEDDPWQDYYRQQSGGKLPIRWMAPEC IF---------NSLYTTLSDVWSFGILLWEIFTLG-GTPYPELPM--------NDQFYNAIKRG--------------YRMAQPAHAS------------ .. . .|| |||||||.|.|||||.| ...|.... |..... ..|| .||.||.|.. LNDRVFSEAEKYGKFTTKSDVWSFGVLMWEIFTYGQEPYYGGMSNQDVWKDGDNQEVMEYLRRGGRLCRSGLNEVGYRMRMPQPPHCPDWMRYRMHPPHC --DEIYEIMQKCWEEKFETRPPFSQLVLLL .|.|..||.||... | || ||||. | PPEEYYDLMQQCWHYDPEDRPTFSQLHEQL |
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Kinase | PDGFRb.AA | TK-Unique | 599-957 | 34 | 4.4e-112 | 378.65 | In-house | 1-294 (294) | Show / Hide |
Range on Protein: 599-957 Range on HMM: 1-294/294 Sequence Identity: 34% (129 aa) LVLGRTLGSGAFGQVVEATAHGLS-HSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGG-PIYIITEYCRYGDLVDYLHRNK |..|...|.|||||| ... |.. |. .. .||||||| |. .||....|...|..||.| |.|..||.||| . | .|| |||..|.| .||.... LEVGDVIGEGAFGQVWRGEVWGIWKHWDKQKCVAVKMLKDNATDTDKQDFLKEIQMMKELGDHPNIVQCLGCCTKSDEPWMIIMEYCPCGNLQHYLRTCR HT--------FLQRHSNKHCPPSAELYSNALPVGFSLPSHLNLTGESDGGYMDMSKDESIDYVPMLDMKGDIKYADIESPSYMAPYDNYVPSAPERTYRA . |. . . .. PAMRQHQTYGNLK---------------------------------------------------------------------------------FDFHHM TLINDSPVLSYTDLVGFSYQVANGMDFLAS--KNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGS-TFLPLKWMAPESIF--NSLY-TTL . .. .|. ||. | .|.|.|| .||| |..|||||.|||||. |.| .||||||.|||.. . |....| .|..||||||. | || PDKPRTEPISPKDLYHFAWQIACGMEYLASQRKKIVHRDLCARNVLLTEDKVCKICDFGMARDVYTNGVYSMMCSQGRIPIRWMAPESLKCYHGMYHTTK SDVWSFGILLWEIFTLGGTPYPELPMNDQFYNAIKRGYRMAQPAHA-SDEIYEIMQKCWEEKFETRPPFSQLVLLL |||||||.|.|||||||..|||..| | . ..|..|||| ||.| |.|.|..|. || .. | || |.|.. | SDVWSFGVLMWEIFTLGACPYPGMPWKD-IMECIRDGYRMPQPEHCCSHEMYNLMKSCWQWEPEERPSFRQIKHRL |
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Kinase | PDGFRb.AA | VEGFR | 801-957 | 58 | 5.6e-95 | 321.83 | In-house | 174-332 (332) | Show / Hide |
Range on Protein: 801-957 Range on HMM: 174-332/332 Sequence Identity: 58% (93 aa) DLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARD-IMRDSNYISKGS-TFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTL ||. .|.|||.||.||||..|.||||||||.|.|| . ||||||||||. | .| .| ||. . ||.||||||||| ||| |||||.|..|||||.| DLICYSFQVARGMEFLASRKCIHRDLAARNILLCENNVVKICDFGLARHGIYKDPDYVRKGDQGRLPIKWMAPESIFDKVYTTYSDVWSYGVFLWEIFSL GGTPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLL || ||| ... |.| .| |||| | . |||.||. || . | || || || | GGSPYPGVQIDEEFCNRLKDGYRMRAPDYCTPEIYHIMLDCWHKEPEERPHFSELVEHL |
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Kinase | PDGFRb.AA | FGFR | 774-957 | 51 | 3.5e-84 | 285.97 | In-house | 113-293 (293) | Show / Hide |
Range on Protein: 774-957 Range on HMM: 113-293/293 Sequence Identity: 51% (94 aa) YDNYVPSAPERTYRATLINDSPVLSYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPES | .| |. || . || | |. ||| . |||| ||..|||. |.||||||||||. .. ||||||||||| | .. || ||||||. YTDYKPRKPEQQDDIELI---PNLTQKDLVSCAYQVARGMEYLASRKCIHRDLAARNVLVTDDYVMKICDFGLARDIHCIDYYRKTTNGRLPIKWMAPEA IFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLL | ||. |||||.|.|||||.|.||.||| | . | | |.|| |.. | ||| .| || .| . ||.| ||| | LFDRVYTHQSDVWSYGVLLWEIMTYGGQPYPHIPSVEELYKYLKEGHRMEKPHNCSQEIYHMMCQCWHFKPCQRPTFKQLVEYL |
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Kinase | PDGFRb.AA | Src | 797-957 | 46 | 3.4e-70 | 237.68 | In-house | 94-255 (255) | Show / Hide |
Range on Protein: 797-957 Range on HMM: 94-255/255 Sequence Identity: 46% (76 aa) LSYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMR--DSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWE |. ..|. .. |||.||..| |.| .||||||||||. |. ..|..|||||| .. | .| .. .| ||.||| | .|. ||||||||||.| LHLPQLIDMAAQVAEGMAYLESMNYIHRDLAARNVLVGENNVCKVADFGLAR-LIKEDDDEYCARHGAKFPIKWTAPEAINYGRFTIKSDVWSFGILLTE IFTLGGTPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYE-IMQKCWEEKFETRPPFSQLVLLL |.| | .||| .| . ...||||| .|.. ||.|| ||..||... | || | | | IVTYGRVPYPGM-TNHEVLQQVERGYRMPCPHNCPDELYEQIMLQCWHKDPEQRPTFEYLQWFL |
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Kinase | PDGFRb.AA | Tie | 791-957 | 47 | 1.7e-66 | 201.16 | In-house | 105-267 (267) | Show / Hide |
Range on Protein: 791-957 Range on HMM: 105-267/267 Sequence Identity: 47% (79 aa) INDSPVLSYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGI .| . || ...| ||.||..|. |.|.||||||||.|.|| . || ||||.| | |. | || .||| ||. | ||| |||||.|. VNVASTLSSQQILHFAADVARGMQYLSQKQCIHRDLAARNILVCENYVCKIADFGLSRG---DEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSYGV LLWEIFTLGGTPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLL ||||| .|||||| . . .|. . .|||| || ||.|..|..|| .. ||||.|... | LLWEIVSLGGTPYCGMTCAE-LYEKLPQGYRMEQPRNCDDEVYDLMRQCWRDRPYERPPFAQIAVQL |
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Kinase | PDGFRb.AA | UTK | 784-957 | 33 | 6.2e-66 | 224.53 | In-house | 102-296 (296) | Show / Hide |
Range on Protein: 784-957 Range on HMM: 102-296/296 Sequence Identity: 33% (66 aa) RTYRATLINDSPVLSYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEG-------KLVKICDFG---LARDIMR--------DS-NYISKGSTFL |. | |. . |. ..........|.|| .|.|...|||||||||.|... ..||.||| ..|.. . .| | . . . . RRHRPTPPACPHWLTLHQRLCMAWDIARGMQYLHSCGFVHRDLAARNCLVHMHRMMWHCMMVCKIADFGRGGMSRRVNTFHFSNRYWESYYYMAQHQDRW PLKWMAPESIFNS-LYTTLSDVWSFGILLWEIFTLGGTPYPELPMNDQFYNAIKRG--YRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLL |..|||||.. . .||.|||||||...|||.| | .|||.. |.| .. .| |||..|.. ....|..|..||. . || | .|| . PIRWMAPEALTHHTRFTTKSDVWSFGVVCWEIWTWGRLPYPGM-SNMQVWHQVCNGGRYRMPCPWDCPHPVYRLMHRCWHYDPQERPDFEDLVQQM |
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Kinase | PDGFRb.AA | RTKB | 797-957 | 45 | 5e-62 | 207.88 | In-house | 106-264 (264) | Show / Hide |
Range on Protein: 797-957 Range on HMM: 106-264/264 Sequence Identity: 45% (74 aa) LSYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLS-DVWSFGILLWEI |. || |. |.|.|| || ..| .||||.|||||. . ||||||.|| | | .. | || |||||||. . ||| | ||||||. ||| LKQAQLVDFCHQIACGMAFLHQHNVIHRDLCARNVLVDQQLHCKICDFGMAREI--DHECYETTCTRLPIKWMAPESWAHRIYTTKSGDVWSFGVTMWEI FTLGGTPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLL |.||||||.... | . . |.|. .| .. ....|||.|| . . || |. || .. FSLGGTPYQQYR-NGDIFYWLESGHRLPKPRQMPQAADHIMQMCWQMEAQHRPDFDELVDAF |
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Kinase | PDGFRb.AA | Ret | 801-959 | 45 | 8.5e-62 | 209.84 | In-house | 136-293 (293) | Show / Hide |
Range on Protein: 801-959 Range on HMM: 136-293/293 Sequence Identity: 45% (72 aa) DLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGG ... | |. || .|.. |||||||||||. ||.. || |||| ||. | |. . .| ||||.|| . ||| |||||||.|.||| |.|. MIISFAWQICKGMHYLSEMKLVHRDLAARNVLVAEGRICKISDFGLTRDVYEDDSYVKRSKDRIPVKWMAIESLYDHVYTTKSDVWSFGVLCWEIVTMGA TPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLLER ||| | . .. | |||| | | |.| || .|| . . || | . .|. NPYPGIPP-ERLWQLLKTGYRMDRPENCSEEMYRIMRQCWKQEPDKRPVFKFISKDFEK |
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Kinase | PDGFRb.AA | VEGFR | 599-699 | 53 | 7.1e-53 | 181.97 | In-house | 1-104 (332) | Show / Hide |
Range on Protein: 599-699 Range on HMM: 1-104/332 Sequence Identity: 53% (56 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTK---GGPIYIITEYCRYGDLVDYLHRN | ||. || ||||||.||.| |. .. . |||||||..| .||. |||||||.. |.| ||||||.||.||| .|| .| |||..| | .|| LKLGKMLGRGAFGQVHEASAFGIRKMETCTTVAVKMLKEGATASEHRALMSELKMLIHIGHHLNVVNFLGCCTKNIQKGPLMVIVEYCCFGNLSNYLRTK KHTF .| RMYF |
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Kinase | PDGFRb.AA | FGFR | 599-695 | 44 | 1.1e-37 | 125.99 | In-house | 1-99 (293) | Show / Hide |
Range on Protein: 599-695 Range on HMM: 1-99/293 Sequence Identity: 44% (44 aa) LVLGRTLGSGAFGQVVEATAHGLSHS--QATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRN |.|| .|| |.||||. |.| |. . .....|||||||. . . | ||. .| | | |..||||.|| .|| |.| ||| | | |.| . LTLGKMLGEGCFGQVWMAEAKGIDCDRPEKEITVAVKMLKMNHTDKDLSDLVSEMEMMKMIGKHKNIINLLGCCTQEGPLYVIVEYCHHGNLRDFLRAR |
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Kinase | PDGFRb.AA | Tie | 608-692 | 40 | 5.1e-27 | 78.72 | In-house | 2-83 (267) | Show / Hide |
Range on Protein: 608-692 Range on HMM: 2-83/267 Sequence Identity: 40% (34 aa) GAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYL | ||||. |. . |.||.||.| | ... | || .| .| | |..||.||| . | .|. .|| .|| |.|.| GNFGQVMKAM---IKKDGLKMEVAIKMMKEYASEDDHRDFMGELEVMCKVGHHPNIINLVGACEHRGYLYVAIEYAPYGNLLDFL |
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Kinase | PDGFRb.AA | Ret | 599-692 | 43 | 7.6e-27 | 88.68 | In-house | 1-96 (293) | Show / Hide |
Range on Protein: 599-692 Range on HMM: 1-96/293 Sequence Identity: 43% (42 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKST-ARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGG--PIYIITEYCRYGDLVDYL |.|. ||| | ||||| |.| . ||||||| | ||| .| ||. . . | .|. |.|||. . | .| |||.|| | .| LQLDDTLGEGHFGQVVKAQAFHIRGHPGYTTVAVKMLKRNTANSSEYHDLLSEFQLLKQVN-HPHVIKLYGACIQDDPFPTCLIVEYCKYGCLREFL |
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Kinase | PDGFRb.AA | UTK | 599-704 | 35 | 8.8e-24 | 78.23 | In-house | 1-114 (296) | Show / Hide |
Range on Protein: 599-704 Range on HMM: 1-114/296 Sequence Identity: 35% (41 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQA----LMSELK---IMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDY . |||.||.||||.| .|.. | .|.|||| ....| . ... .| | . .|... | ||..|.| ||...|..|.|||.. |||..| VQLGRQLGQGAFGEVHKARFTQCSEHMYEMDVAVKVCQHHADAQQEPEPYPDFMEEARELQMMKQFHWHPNVLRLVGVCTQEEPWMIVTEYMENGDLRSY LHRNKHTFL-QRHS | |...|. ..|. LRRHRPTPPACPHW |
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Kinase | PDGFRb.AA | S_TKc | 599-961 | 18 | 1.1e-23 | 85.98 | SMART | 1-231 (231) | Show / Hide |
Range on Protein: 599-961 Range on HMM: 1-231/231 Sequence Identity: 18% (68 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRY--GDLVDYLHRNK ..|..|.||||.| .. .. .||.|..| . ...|..|... | |.|.|.... . .|...||| ||| ||..... YEILRKIGKGAFGKVYKCRHKK-----TGRIVAIKIIK--------EHIRREIQILKK--HHPNIVKLYDVFQD-DHLYMVMEYCDGDLGDLFDYIKKRG HTFLQRHSNKHCPPSAELYSNALPVGFSLPSHLNLTGESDGGYMDMSKDESIDYVPMLDMKGDIKYADIESPSYMAPYDNYVPSAPERTYRATLINDSPV . |.. . RHGLRF---------------------------------------------------------------------------------------------P LSYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTT-LSDVWSFGILLWEI .. . . ||........ |.. .|||| |.|..| .||||||||| . . . .|||| . |.. .|.||.|..|.| FPE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE--HIKICDFGLARQL---------TTFCGTPWYMAPEVL---GYGKCKCDWWSCGCILYEM FTLGGTPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVL-----LLERLL .. | .|.| .. .. |. |.| ....||.. | || .. . . LC-GYPPFP---QMQMMFKKIG-----------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF |
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Kinase | PDGFRb.AA | Pkinase | 789-957 | 23 | 8.8e-22 | 78.1 | Pfam | 93-293 (293) | Show / Hide |
Range on Protein: 789-957 Range on HMM: 93-293/293 Sequence Identity: 23% (48 aa) TLIN--DSPVL--SYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLIC-EGKL---VKICDFGLARD--IMRDSNYISKGSTFLPLKWMAPESIF-NS ..| .. .. |. .. . ||.. |.... |....|||| |.|| .| . |||||||||. . ..| . . | . .|||| | .. DYISTWRHGCFYFSEWECKFYMYQILRGLEYCHSMGIIHRDLKPENILIDNNGHIDACVKICDFGLAKQFDY-NNS-MTTFCGT---PWYMAPEVIRGGQ LYTTLSDVWSFGILLWEIFTLGGTPYPEL----PMNDQFYNAIKRGYRMAQPAHA----------------------SDEIYEIMQKCWEEKFETRPPFS |.. .|.||.|..|.| .. | .|.|. . .|| . ..... |.| ... .|.. . . || . YYGPKVDMWSCGCILYEMLC-GRPPFPGHCWHDN-HDQMQMICRIMGPPLHFDWPWWCSISYFFFRHWHFHWTFHNWSEECKDFIKWCLCKDPKKRPTAE QLVLL--L |.. . QILQHPWF |
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Kinase | PDGFRb.AA | Src | 599-696 | 37 | 1.2e-20 | 66.84 | In-house | 1-90 (255) | Show / Hide |
Range on Protein: 599-696 Range on HMM: 1-90/255 Sequence Identity: 37% (37 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLH-RNK . | | ||.| || | ... | ..||||| ||. . .|. | .|| | | ..|.|. |... ||||.||| . | | |||. . . IKLCRKLGQGQFGEVWMGYWNG------NTKVAVKTLKPGT--MSPEAFLQEAQIMKKLR-HEKLVQLYAVCSQEEPIYIVTEYMSHGSLLDYLKKDGE |
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Kinase | PDGFRb.AA | RTKB | 599-693 | 37 | 1.8e-20 | 65.76 | In-house | 1-94 (264) | Show / Hide |
Range on Protein: 599-693 Range on HMM: 1-94/264 Sequence Identity: 37% (36 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLH . ||. ||.||||.| | ..|. . .|.| || | . |.|. ||. .| ||.| ||. ..| | . | . |.| .| | |||. VWLGEKLGNGAFGEVFQAWVR-NRHMNTEQSCAAKVLKPGASYEERQDFCSEMTVMKELGWHPNVIGIIGHCLQDEPYILLVELCELGNLRDYLR |
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Kinase | PDGFRb.AA | Pkinase | 599-696 | 33 | 1.5e-18 | 66.66 | Pfam | 1-101 (293) | Show / Hide |
Range on Protein: 599-696 Range on HMM: 1-101/293 Sequence Identity: 33% (36 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQ--ALM-SELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYG----DLVDY ...||..|||.||.| ... .| .. .|||| .| ..|.|. .. ||..|| .| | |.| |..... .. ||...|||. | || || YHIGRKIGSGSFGCVYKCHHKGTGK-----IVAVKIIKKRHEKSWKDQTHRRLSEIQIMKRL-NHPNIVRLYDWFEDKDHIYMVMEYCEGGLYVMDLFDY LH--RNK .. |.. ISTWRHG |