Gene GL50803_16733 (G.lamblia)

GL50803_16733

Species: G.lamblia
Alias: GK303, GL50803_16733
External Links: GiardiaDB ,
Annotation:

Classification

Group: Other
Family: Nek
Subfamily: Nek-Unclassified

Sequence

Name Sequence Type Origin Length Description Download
GL50803_16733.AA Protein None 601 None Fasta, JSON
GL50803_16733.kin_dom Protein Kinase Domain None 248 None Fasta, JSON

Protein domain

Protein domains of GL50803_16733.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
S_TKc GL50803_16733.AA S_TKc 28-295 15 5.4e-08 -59.72 SMART 1-231 (231) Show / Hide 
Range on Protein: 28-295
Range on HMM: 1-231/231
Sequence Identity: 15% (46 aa)

YELCSIL-RGGFSLAEYLVRHISIGEKFLCVELDYGNIKHFNKELCLARLMSFMGHQHANHLTYREFFADEDARKIQIIMEPYIN--KCLCDVIDQICRR
||.  .. .|.|.   |..||.. |... . ...    .|. .|. . .       .| |  .. ..| |    .. ..||   .    | |.|..  |.
YEILRKIGKGAFGKV-YKCRHKKTGRIVAIKIIK----EHIRREIQILKK------HHPNIVKLYDVFQD---DHLYMVMEYCDGDLGDLFDYIKKRGRH

KLT--LSDDAIWGIIAQVFNGLYFYHQTDINGFCGKTPIHGGINAENIYISTNGVVQLGPF---RLLPDFEDDFDNLQEDSTVILPTSPGSTVQSSW---
.|   ..   .. ...|....| . |.  |        ||  .  ||| ...  .. .. |   |.|                       . . . |   
GLRFPFPE-HARFYMYQICCALEYCHSHGI--------IHRDLKPENILLDE--HIKICDFGLARQL----------------------TTFCGTPWYMA

-------N-VSDLQALGCIVYELLTGISLSRDEQLQYYTPCTVQEARKGLQSEFVSGNLLQFVKRLLDASVS---STAALLS---VADNEHLL
          .|  ..|||.||.|.|  . . .. . .  .              |  ...|....|.   .   .   .|    .. .   .
PEVLGYGKCKCDWWSCGCILYEMLCGYPPFP-QMQMMFKKIG-------------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase GL50803_16733.AA AGC 223-236 50 0.000702 4.33 In-house 288-303 (395) Show / Hide 
Range on Protein: 223-236
Range on HMM: 288-303/395
Sequence Identity: 50% (8 aa)

A--LGCIVYELLTGIS
.  |||. ||.|||..
SFGLGCLMYEMLTGYP