Gene GL50803_16215 (G.lamblia)

GL50803_16215

Species: G.lamblia
Alias: GL50803_16215, GK274
External Links: GiardiaDB ,
Annotation:

Classification

Group: Other
Family: Nek
Subfamily: Nek-Unclassified

Sequence

Name Sequence Type Origin Length Description Download
GL50803_16215.AA Protein None 875 None Fasta, JSON
GL50803_16215.kin_dom Protein Kinase Domain None 254 None Fasta, JSON

Protein domain

Protein domains of GL50803_16215.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
S_TKc GL50803_16215.AA S_TKc 19-291 11 1e-05 -92.77 SMART 1-231 (231) Show / Hide 
Range on Protein: 19-291
Range on HMM: 1-231/231
Sequence Identity: 11% (37 aa)

FDLYEH-----------ARDKG-LCVYRFKRSDFIPPFPKAYDRSLAALCALPKNRFIQFYPLVFDGDDGYIVMEKHGV---PLSHFINELKSQNRE--L
... ..           .|.|.   ..  |. .      .   | .. |        ...|    | |. |.|||  .     | ..| . ... .   .
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK------EHIRREIQILKK-HHPNIVKLYDVFQD-DHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPF

DVDEFWKITVQLIYIL-----------------ILFSTIEGRRNTV-----GLDKDYTNVTPDLFLHVLKLFEGMTEEERVAHIAVTPSVIFINSNLEVK
.  . .... |..  |                 ||...      ..     || . .                                           
PE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE------HIKICDFGLARQL-------------------------------------------

LLILNLFNCIETSKGLADAAAHEEY---LSFLAPDNLEEKIHLR-ALDCWSVGAIMWYLVKLEYPRFHHDSTTKESVIVKPIPNLDRNVQLCLSMLLVVN
                        .   . ..||  |    . . . | ||.| |.. ..  . |         . .. | |   .. .   .. .|...
----------------------TTFCGTPWYMAPEVL---GYGKCKCDWWSCGCILYEMLCGYPPFP------QMQMMFKKIG--SPEAKDFIRKCLQKD

PEQRWCIEDLLM-------LPTV
||.|. . ..|         | .
PEKRPTA-EALQDEWDIKCHPWF
Kinase GL50803_16215.AA CAMK 271-291 42 0.000933 7.19 In-house 405-425 (425) Show / Hide 
Range on Protein: 271-291
Range on HMM: 405-425/425
Sequence Identity: 42% (9 aa)

LLVVNPEQRWCIEDLLMLPTV
.|.|.||.|. ||. |  | .
MLQVDPEKRMTIEQCLNHPWM